FC868518

Overview
NameFC868518
Unique NameFC868518
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868518 vs. ExPASy Swiss-Prot
Match: 6PGD_CHLPN (6-phosphogluconate dehydrogenase, decarboxylating OS=Chlamydia pneumoniae GN=gnd PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.374e-42
Identity = 85/172 (49.42%), Postives = 123/172 (71.51%), Query Frame = 3
Query:  177 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFLDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQVP**RPCVTY 692
            T IGL GLAVMG+NL LN+ + GF +SVYNRT  K  + ++      +L   GF   E FVNS+++PR I+++++AG PVD++I  L  ++E GD IIDGGN +++++ERR K + E G+L+LG+G+SGGEEGARHGPS+MPGG+ EA+  +  I   +AA+V   RPC ++
Sbjct:    3 TNIGLIGLAVMGKNLVLNMIDHGFSVSVYNRTPEKTRDFLKEYPNHREL--VGFESLEDFVNSLERPRKIMLMIQAGKPVDQSIHALLPFLEPGDVIIDGGNSYFKDSERRCKELQEKGILFLGVGISGGEEGARHGPSIMPGGNPEAWPLVAPIFQSIAAKVQ-GRPCCSW 171          
BLAST of FC868518 vs. ExPASy Swiss-Prot
Match: 6PGD2_BACSU (6-phosphogluconate dehydrogenase, decarboxylating 2 OS=Bacillus subtilis GN=yqjI PE=1 SV=4)

HSP 1 Score: 169.474 bits (428), Expect = 1.539e-41
Identity = 85/171 (49.71%), Postives = 123/171 (71.93%), Query Frame = 3
Query:  180 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFLDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQVP**RPCVTY 692
            +IG+ GLAVMG+NLALNI  +GF +SVYNR++SK +E ++ AK +    + G    E FV S++ PR I+++VKAG   D TI++L  ++EK D +IDGGN +Y++T+RR K +AE G+ ++G GVSGGEEGA  GPS+MPGG  EA++ ++ IL  ++A+V    PC TY
Sbjct:    5 QIGVIGLAVMGKNLALNIESRGFSVSVYNRSSSKTEEFLQEAKGKN---VVGTYSIEEFVQSLETPRKILLMVKAGTATDATIQSLLPHLEKDDILIDGGNTYYKDTQRRNKELAESGIHFIGTGVSGGEEGALKGPSIMPGGQKEAHELVKPILEAISAKVD-GEPCTTY 171          
BLAST of FC868518 vs. ExPASy Swiss-Prot
Match: 6PGD_CHLMU (6-phosphogluconate dehydrogenase, decarboxylating OS=Chlamydia muridarum GN=gnd PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.625e-41
Identity = 87/171 (50.88%), Postives = 124/171 (72.51%), Query Frame = 3
Query:  183 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGD-LPLFGFLDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQVP**RPCVTY 692
            IGL GLAVMG+NL LN+ + GF +SVYNR+  K +E +   K+ G+ + L GF   E FV S+++PR I++++KAGAPVDE I +L  ++E+GD +IDGGN +Y ++ERR   + + G+L++GMGVSGGEEGAR GPS+MPGG+ EA+  I  I   +AAQV   +PC ++
Sbjct:    6 IGLIGLAVMGKNLVLNMIDHGFAVSVYNRSPEKTEEFL---KEHGENISLQGFTAIEEFVQSLKRPRKIMIMIKAGAPVDEMISSLLPFLEEGDILIDGGNSYYLDSERRYIDLKKKGILFVGMGVSGGEEGARKGPSIMPGGNIEAWPVIAPIFQSIAAQVD-GQPCCSW 172          
BLAST of FC868518 vs. ExPASy Swiss-Prot
Match: 6PGD_SYNE7 (6-phosphogluconate dehydrogenase, decarboxylating OS=Synechococcus elongatus (strain PCC 7942) GN=gnd PE=1 SV=4)

HSP 1 Score: 167.933 bits (424), Expect = 4.477e-41
Identity = 89/174 (51.15%), Postives = 121/174 (69.54%), Query Frame = 3
Query:  174 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETV-ERAKKEGDLPLFGFLDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQVP**RPCVTY 692
            L + GL GLAVMG+NLALNI   GF ++VYNRT  K +  + +RA+ +  +P +     E FV S+++PR I+++VKAG PVD  ++ L   ++ GD IIDGGN  + +TERR K +  LGL ++GMGVSGGEEGA +GPSLMPGG+  AY+ +E I+  +AAQV    PCVTY
Sbjct:    3 LQQFGLIGLAVMGENLALNIERNGFSLTVYNRTAEKTEAFMADRAQGKNIVPAYSL---EDFVASLERPRRILVMVKAGGPVDAVVEQLKPLLDPGDLIIDGGNSLFTDTERRVKDLEALGLGFMGMGVSGGEEGALNGPSLMPGGTQAAYEAVEPIVRSIAAQVD-DGPCVTY 172          
BLAST of FC868518 vs. ExPASy Swiss-Prot
Match: 6PGD_CHLTR (6-phosphogluconate dehydrogenase, decarboxylating OS=Chlamydia trachomatis GN=gnd PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.477e-41
Identity = 85/172 (49.42%), Postives = 124/172 (72.09%), Query Frame = 3
Query:  177 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFLDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQVP**RPCVTY 692
            T IGL GLAVMG+NL LN+ + GF +SVYNR+ +K +E ++   + G L   GF   + FV S+++PR I++++KAGAPVDE I +L  ++E+GD +IDGGN +Y ++E+R   + + G+L++GMGVSGGEEGAR GPS+MPGG+ +A+  I  I   +AAQV   RPC ++
Sbjct:    5 TDIGLIGLAVMGKNLVLNMVDHGFSVSVYNRSPAKTEEFLKDHGESGALQ--GFTTIQEFVQSLKRPRKIMIMIKAGAPVDEMIASLLPFLEEGDILIDGGNSYYLDSEQRYVDLKKEGILFVGMGVSGGEEGARKGPSIMPGGNIDAWPAIAPIFQSIAAQVD-GRPCCSW 173          
BLAST of FC868518 vs. ExPASy Swiss-Prot
Match: 6PGD_HAEIN (6-phosphogluconate dehydrogenase, decarboxylating OS=Haemophilus influenzae GN=gnd PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.303e-40
Identity = 83/167 (49.70%), Postives = 117/167 (70.06%), Query Frame = 3
Query:  183 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFLDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQVP**RPC 683
            IG+ GLAVMGQNL LN+ + GF +  YNRTTSKVDE ++ A K  ++   G    E     ++KPR ++++V+AG  VD+ I+ L  ++E+GD IIDGGN  Y +T RR KA+AE G+ ++G GVSGGEEGARHGPS+MPGG+ EA++Y++ I   ++A+     PC
Sbjct:    7 IGVIGLAVMGQNLILNMNDHGFKVVAYNRTTSKVDEFLQGAAKGTNI--IGAYSLEDLAAKLEKPRKVMLMVRAGDVVDQFIEALLPHLEEGDIIIDGGNSNYPDTNRRVKALAEKGIRFIGSGVSGGEEGARHGPSIMPGGNQEAWQYVKPIFQAISAKTEQGEPC 171          
BLAST of FC868518 vs. ExPASy Swiss-Prot
Match: 6PGD_SCHPO (6-phosphogluconate dehydrogenase, decarboxylating OS=Schizosaccharomyces pombe GN=SPBC660.16 PE=1 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 1.701e-40
Identity = 89/172 (51.74%), Postives = 117/172 (68.02%), Query Frame = 3
Query:  168 KQLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFLDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQVP**RPC 683
            K++   GL GLAVMGQNL LN A+KGF +  YNRTTS+VDE +    K   +   G    E FV+ ++KPRV I+LVKAG PVD  I+ L+  +EKGD I+DGGN  Y +T RR + +A+ G+L++G GVSGGEEGAR+GPSLMPGG+  A+  I+ I   +AA+     PC
Sbjct:    4 KEVADFGLIGLAVMGQNLILNGADKGFTVCCYNRTTSRVDEFLANEAKGKSI--VGAHSLEEFVSKLKKPRVCILLVKAGKPVDYLIEGLAPLLEKGDIIVDGGNSHYPDTTRRCEELAKKGILFVGSGVSGGEEGARYGPSLMPGGNPAAWPRIKPIFQTLAAKAGNNEPC 173          
BLAST of FC868518 vs. ExPASy Swiss-Prot
Match: 6PGD_BUCAP (6-phosphogluconate dehydrogenase, decarboxylating OS=Buchnera aphidicola subsp. Schizaphis graminum GN=gnd PE=3 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 2.222e-40
Identity = 80/171 (46.78%), Postives = 120/171 (70.18%), Query Frame = 3
Query:  180 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFLDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQVP**RPCVTY 692
            ++G+ G+AVMG+NLALNI  K + +S++NRT S  +E +   K++   P F   D   FVNS++KPR I+++VK+G P DETI+ +  Y+ KGD +IDGGN +Y+++ RR   + + G+ ++GMGVSGGE GA +GPS+MPGGS EAY  +  +L K++A+     PCV+Y
Sbjct:    5 QVGVIGMAVMGRNLALNIESKKYTVSIFNRTQSVTEEVINNNKEKKIFPYFSIKD---FVNSLRKPRCILLMVKSGQPTDETIQFILPYLNKGDILIDGGNTFYKDSIRRSNDLMKCGINFIGMGVSGGELGALNGPSIMPGGSREAYDLVSSMLKKISAKFK-NEPCVSY 171          
BLAST of FC868518 vs. ExPASy Swiss-Prot
Match: 6PGD_SYNY3 (6-phosphogluconate dehydrogenase, decarboxylating OS=Synechocystis sp. (strain PCC 6803) GN=gnd PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.465e-40
Identity = 88/171 (51.46%), Postives = 116/171 (67.84%), Query Frame = 3
Query:  186 GLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFLDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQV--P**RPCVTY 692
            G+ GLAVMG+NLALN+  +GFPI+V+NR+ +K ++ +       D+        E FV  +++PR I+++VKAG PVD  I  L   +E+GD IIDGGN  YE+TERR K +   GL ++GMGVSGGEEGA  GPSLMPGG+  AYK +E IL K+AAQV  P    CVT+
Sbjct:   14 GVIGLAVMGENLALNVESRGFPIAVFNRSPNKTEKFMAERAVGKDIK--AAYTVEEFVQLLERPRKILVMVKAGGPVDAVINELKPLLEEGDMIIDGGNSLYEDTERRTKDLEATGLGFVGMGVSGGEEGALLGPSLMPGGTPAAYKELEPILTKIAAQVEDPDNPACVTF 182          
BLAST of FC868518 vs. ExPASy Swiss-Prot
Match: 6PGD_AGGAC (6-phosphogluconate dehydrogenase, decarboxylating OS=Aggregatibacter actinomycetemcomitans GN=gnd PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.465e-40
Identity = 82/167 (49.10%), Postives = 114/167 (68.26%), Query Frame = 3
Query:  183 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFLDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQVP**RPC 683
            IG+ GLAVMGQNL LN+ + GF +  YNRTTSKVDE +E A K  ++   G    E   N ++KPR ++++V+AG  VD  I  L  ++E GD IIDGGN  Y +T RR  A+ E G+ ++G GVSGGEEGARHGPS+MPGG+ EA+++++ +L  ++A+     PC
Sbjct:    7 IGVIGLAVMGQNLILNMNDHGFKVVAYNRTTSKVDEFLEGAAKGTNI--IGAYSLEDLANKLEKPRKVMLMVRAGEVVDHFIDALLPHLEAGDIIIDGGNSNYPDTNRRVAALREKGIRFIGTGVSGGEEGARHGPSIMPGGNEEAWQFVKPVLQAISAKTEQGEPC 171          
The following BLAST results are available for this feature:
BLAST of FC868518 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
6PGD_CHLPN2.374e-4249.426-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD2_BACSU1.539e-4149.716-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CHLMU2.625e-4150.886-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SYNE74.477e-4151.156-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CHLTR4.477e-4149.426-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_HAEIN1.303e-4049.706-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SCHPO1.701e-4051.746-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_BUCAP2.222e-4046.786-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SYNY36.465e-4051.466-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_AGGAC6.465e-4049.106-phosphogluconate dehydrogenase, decarboxylating ... [more]

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Properties
Property NameValue
Genbank descriptionC31001D08EF AbioticL1 Citrus clementina cDNA clone C31001D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868518 ID=FC868518; Name=FC868518; organism=Citrus clementina; type=EST; length=694bp
GGACGTATTGTATTTTTAATCATTTATTATGTTTATAGAGTCTCTGCTCT
GCTAATCCCAGATCACATTTTGGGTTGATTTGTCTGAATTTTCCTTCTCT
TGTTTTTGCATCAGATTTTAGAAGAAGAAGAAGAAGAATTTTTTAAGAGG
AAGATATGGTTGAGGGCAAACAACTTACGAGAATAGGCCTTGCTGGTCTG
GCGGTCATGGGCCAAAATCTCGCCCTCAACATTGCTGAAAAAGGCTTTCC
CATTTCTGTTTATAACCGAACTACCTCCAAAGTTGATGAGACAGTTGAAA
GAGCTAAAAAGGAGGGAGATCTGCCTTTATTTGGTTTCCTTGATCCTGAA
TCGTTTGTCAATTCAATCCAAAAACCTCGGGTGATAATCATGCTTGTTAA
AGCTGGTGCACCTGTTGACGAAACCATTAAGACCCTCTCCGCTTACATGG
AGAAAGGTGATTGCATCATTGATGGGGGTAATGAGTGGTATGAGAACACC
GAGAGAAGAGAGAAAGCCATGGCTGAATTGGGTTTGCTCTACCTTGGAAT
GGGAGTTTCAGGTGGTGAAGAGGGTGCAAGACATGGTCCTTCTTTGATGC
CTGGAGGATCATTCGAGGCTTACAAGTATATTGAAGACATTCTTCTAAAG
GTCGCGGCTCAAGTTCCCTGATAGCGCCCCTGTGTGACTTACAT
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