FC875262

Overview
NameFC875262
Unique NameFC875262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7777 contig Ccv1_Contig7777:844..1575. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875262 vs. ExPASy Swiss-Prot
Match: SPORB_IPOBA (Sporamin B OS=Ipomoea batatas GN=GSPO-B1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.811e-12
Identity = 57/176 (32.39%), Postives = 84/176 (47.73%), Query Frame = 2
Query:  116 PLVDVNGNKVEASRDYYLVSAIRGAGGSGLTLFR--GRNELCPLDVVQLSSDSERGTRLRFSMYD-KTSIINEDVDLNVRFSTETR--CNEPTVWRVDSYDPSRGKWFITTGG-VEGNPGAQTLKNWFKFERIGGDRATYKIVHCPSVCESCVSLCNDVGVSND---HARRLALTN 616
            P++D+NG++V A  +YY+VSAI GAGG GL L R    +  C  DV+   SD + G  +  +  D + +++        RF+  T   C     W +  +D   G++F+  G  V  N       N FK E +  +   YKI +C    E C     +VG   D    A RLAL+N
Sbjct:   40 PVLDINGDEVRAGENYYIVSAIWGAGGGGLRLVRLDSSSNECASDVIVSRSDFDNGDPITITPADPEATVVMPSTYQTFRFNIATNKLCVNNVNWGI-KHDSESGQYFVKAGEFVSDN------SNQFKIEVVNDNLNAYKISYCQFGTEKCF----NVGRYYDPLTRATRLALSN 204          
BLAST of FC875262 vs. ExPASy Swiss-Prot
Match: SPOR2_IPOBA (Sporamin B OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.811e-12
Identity = 57/176 (32.39%), Postives = 84/176 (47.73%), Query Frame = 2
Query:  116 PLVDVNGNKVEASRDYYLVSAIRGAGGSGLTLFR--GRNELCPLDVVQLSSDSERGTRLRFSMYD-KTSIINEDVDLNVRFSTETR--CNEPTVWRVDSYDPSRGKWFITTGG-VEGNPGAQTLKNWFKFERIGGDRATYKIVHCPSVCESCVSLCNDVGVSND---HARRLALTN 616
            P++D+NG++V A  +YY+VSAI GAGG GL L R    +  C  DV+   SD + G  +  +  D + +++        RF+  T   C     W +  +D   G++F+  G  V  N       N FK E +  +   YKI +C    E C     +VG   D    A RLAL+N
Sbjct:   40 PVLDINGDEVRAGENYYMVSAIWGAGGGGLRLVRLDSSSNECASDVIVSRSDFDNGDPITITPADPEATVVMPSTYQTFRFNIATNKLCVNNVNWGI-KHDSESGQYFVKAGEFVSDN------SNQFKIEVVNDNLNAYKISYCQFGTEKCF----NVGRYYDPLTRATRLALSN 204          
BLAST of FC875262 vs. ExPASy Swiss-Prot
Match: PIP21_PEA (Kunitz-type trypsin inhibitor-like 1 protein OS=Pisum sativum GN=PIP20-1 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.671e-12
Identity = 56/208 (26.92%), Postives = 94/208 (45.19%), Query Frame = 2
Query:   62 ISFLVLTFATKPLVGLA----DPLVDVNGNKVEASRDYYLVSAIRGAGGSGLTLFRGRNELCPLDVVQLSSDSERGTRLRFSMYD-KTSIINEDVDLNVRFSTETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGGDRATYKIVHCPSVCESCVSLCNDVG--VSNDHARRLALTNGRALAVVLVPGNERSA 664
            +SF +  F T   +  +    + ++D NGN +     Y+++ AIRG  G G+ L R  +  CP+ V+Q   + + G  ++F + +    II     + + ++ +  C + + W V   D    K  +  GG E  PG QTL   FK E+       YK+  C     +C+    DVG   +++  RRL LT   +  VV +      A
Sbjct:    9 LSFFLFVFITNLSLAFSNEDVEQVLDFNGNPIFPGVQYFILPAIRGPAGGGVRLGRTGDLTCPVTVLQDRQEVKNGLPVKFVIPEISPGIIFTGTPIEIEYTKKPNCAKSSKWLV-FVDNVIQKACVGIGGPENYPGVQTLSGLFKIEKHESGFG-YKLGFCVKGSPTCL----DVGRFDNDEDGRRLNLTEHESFQVVFIQAEANDA 210          
BLAST of FC875262 vs. ExPASy Swiss-Prot
Match: KTI1_SOYBN (Kunitz-type trypsin inhibitor KTI1 OS=Glycine max GN=KTI1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.068e-11
Identity = 55/196 (28.06%), Postives = 89/196 (45.41%), Query Frame = 2
Query:   68 FLVLTFATKPLVGL-ADPLVDVNGNKVEASRDYYLVSAIRGAGGSGLTLFRGRNELCPLDVVQLSSDSERGTRLRFSMYDKTSIINEDVDLNVR---FSTETRC-NEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGGDRATYKIVHCPSVCESCVSLCNDVG--VSNDHARRLALTNGRALAV 634
            FLV  F    L    A  ++D + + ++    YY++  +RG GG G+ +     E+CPL VVQ  ++ ++G  L F+       I E   L+++   F+  T C   PT W +   +  +         V+G         WF  ER+  +   YK+V CP   E   + C D+G  + +D  RRL L+  + L V
Sbjct:   10 FLVCAFTISYLPSATAQFVLDTDDDPLQNGGTYYMLPVMRGKGG-GIEVDSTGKEICPLTVVQSPNELDKGIGLVFTSPLHALFIAERYPLSIKFGSFAVITLCAGMPTEWAIVEREGLQAVKLAARDTVDG---------WFNIERVSREYNDYKLVFCPQQAED--NKCEDIGIQIDDDGIRRLVLSKNKPLVV 193          
BLAST of FC875262 vs. ExPASy Swiss-Prot
Match: ITRA_SOYBN (Trypsin inhibitor A OS=Glycine max GN=KTI3 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.822e-11
Identity = 59/198 (29.80%), Postives = 85/198 (42.93%), Query Frame = 2
Query:   68 FLVLTFATKPLVG-LADPLVDVNGNKVEASRDYYLVSAIRGAGGSGLTLFRGRNELCPLDVVQLSSDSERGTRLRFSMYDKTSIINEDVDLNVRFST----ETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGGDR-ATYKIVHCPSVCESCVSLCNDVGVSNDH---ARRLALTNGRALAV 634
            FL   F T  L   +AD ++D  GN +E    YY++S I   G  G+      NE CPL VVQ  ++ ++G     S   +   I E   L+++F +          PT W V    P           V+       +  WF+ ER+  D    YK+V CP   E     C D+G+S DH    RRL ++  + L V
Sbjct:    9 FLFCAFTTSYLPSAIADFVLDNEGNPLENGGTYYILSDITAFG--GIRAAPTGNERCPLTVVQSRNELDKGIGTIISSPYRIRFIAEGHPLSLKFDSFAVIMLCVGIPTEWSVVEDLPE-------GPAVKIGENKDAMDGWFRLERVSDDEFNNYKLVFCPQQAED--DKCGDIGISIDHDDGTRRLVVSKNKPLVV 195          
BLAST of FC875262 vs. ExPASy Swiss-Prot
Match: IAAS_WHEAT (Endogenous alpha-amylase/subtilisin inhibitor OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.822e-11
Identity = 49/162 (30.25%), Postives = 76/162 (46.91%), Query Frame = 2
Query:  116 PLVDVNGNKVEASRDYYLVSAIRGAGGSGLTLFRGRNELCPLDVVQLSSDSERGTRLRFSMY---DKTSIINEDVDLNVRFSTETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGGDRA-TYKIVHCPSVCESCVSLCNDVGVSND 589
            P+ D +GN++ A  +YY++ A R  GG GLT+  G    CPL V Q +     G  +R + +       II    D+ + F   T C + T W +DS +   G+  + TG V  +P     +N F+ E+  G     YK++       +C   C D+GV  D
Sbjct:    4 PVHDTDGNELRADANYYVLPANRAHGG-GLTMAPGHGRRCPLFVSQEADGQRDGLPVRIAPHGGAPSDKIIRLSTDVRISFRAYTTCVQSTEWHIDS-ELVSGRRHVITGPVR-DPSPSGRENAFRIEKYSGAEVHEYKLM-------ACGDSCQDLGVFRD 155          
BLAST of FC875262 vs. ExPASy Swiss-Prot
Match: SPI7_SOLTU (Serine protease inhibitor 7 OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.108e-11
Identity = 60/202 (29.70%), Postives = 93/202 (46.04%), Query Frame = 2
Query:   80 TFATKPLVGL---ADPLVDVNGNKVEASRDYYLVSAIRGAGGSGLTLFRGRNELCPL--DVVQLSSD-SERGTRLRF----SMYDKTSIINEDVDLNVRFSTETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGGDRATYKIVHCP-SVCESCV-----SLCNDVGVSNDHA-RRLALTNGRALAV 634
            TF +K  + L   A P++DV G ++++   Y ++S   GA G  + L +  N   P    + + +SD    GT +RF    S + +    NE +++    ST   C   T+W+V  YD S G   + TGG  G    Q   +WFK   +   +  Y +++CP +   SC        C  VGV + +  RRLAL     L V
Sbjct:   20 TFTSKNPINLPSDATPVLDVAGKELDSRLSYRIISTFWGALGGDVYLGKSPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTSKLCVSYTIWKVGDYDASLGTMLLETGGTIG----QADSSWFKI--VKSSQFGYNLLYCPVTSTMSCPFSSDDQFCLKVGVVHQNGKRRLALVKDNPLDV 215          
BLAST of FC875262 vs. ExPASy Swiss-Prot
Match: SPI6_SOLTU (Probable serine protease inhibitor 6 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.108e-11
Identity = 59/202 (29.21%), Postives = 93/202 (46.04%), Query Frame = 2
Query:   80 TFATKPLVGL---ADPLVDVNGNKVEASRDYYLVSAIRGAGGSGLTLFRGRNELCPL--DVVQLSSD-SERGTRLRF----SMYDKTSIINEDVDLNVRFSTETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGGDRATYKIVHCP-SVCESCV-----SLCNDVGVSNDHA-RRLALTNGRALAV 634
            TF ++  + L   A P++DV G +++    Y+++S   GA G  + L +  N   P    + + +SD    GT +RF    S + +    NE +++    ST   C   T+W+V  YD S G   + TGG  G    Q   +WFK   +   +  Y +++CP +   SC        C  VGV + +  RRLAL     L V
Sbjct:   20 TFTSQNPINLPSDATPVLDVTGKELDPRLSYHIISTFWGALGGDVYLGKSPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTSKLCVSYTIWKVGDYDASLGTMLLETGGTIG----QADSSWFKI--VQSSQFGYNLLYCPVTSTMSCPFSSDDQFCLKVGVVHQNGKRRLALVKDNPLDV 215          
BLAST of FC875262 vs. ExPASy Swiss-Prot
Match: ICI2_CANLI (Subtilisin inhibitor CLSI-II OS=Canavalia lineata PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.108e-11
Identity = 53/182 (29.12%), Postives = 85/182 (46.70%), Query Frame = 2
Query:  113 DPLVDVNGNKVEASRDYYLVSAIRGAGGSGLTLFRGRNELCPLDVVQLSSDSERGTRLRFSMYDKTS---IINEDVDLNVRFSTETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGGDRATYKIVHCPSVCESCVSLCNDVG--VSNDHARRLALTNGRALAVVLV 643
            D ++D +   +    +YY++ AI G  G G+ L + RN  CP+ V+Q   +   G  ++F++  + S   I N  V+    F  +  C   + W V   D    K  +  GG E +PG Q     F  ++      +YK+V     CES  S C+D+G   +N+  RRL LT+     VV +
Sbjct:    4 DVVMDASSKPIFPGGEYYIMPAIWGPPGGGVRLAKTRNSDCPVTVLQDYGEVIFGQPVKFTLPGRGSGLIITNTPVE---EFIKKPECASSSKWSV-FVDDEIEKACVGIGGHEDHPGEQVFSGTFTIQKSRTPYNSYKLV----FCESDSSTCSDIGRYDNNEGGRRLILTHHNPFQVVFM 177          
BLAST of FC875262 vs. ExPASy Swiss-Prot
Match: SPI1_SOLTU (Serine protease inhibitor 1 OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.059e-11
Identity = 59/202 (29.21%), Postives = 93/202 (46.04%), Query Frame = 2
Query:   80 TFATKPLVGL---ADPLVDVNGNKVEASRDYYLVSAIRGAGGSGLTLFRGRNELCPL--DVVQLSSD-SERGTRLRF----SMYDKTSIINEDVDLNVRFSTETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGGDRATYKIVHCP-SVCESCV-----SLCNDVGVSNDHA-RRLALTNGRALAV 634
            TF ++  + L   A P++DV G ++++   Y ++S   GA G  + L +  N   P    V + +SD    GT +RF    S + +    NE +++    ST   C   T+W+V  YD S G   + TGG  G    Q   +WFK   +   +  Y +++CP +   SC        C  VGV + +  RRLAL     L +
Sbjct:   20 TFTSQNPINLPSDATPVLDVTGKELDSRLSYRIISTFWGALGGDVYLGKSPNSDAPCANGVFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTSKLCVSYTIWKVGDYDASLGTMLLETGGTIG----QADSSWFKI--VKSSQLGYNLLYCPVTSTMSCPFSSDDQFCLKVGVVHQNGKRRLALVKDNPLDI 215          
The following BLAST results are available for this feature:
BLAST of FC875262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
SPORB_IPOBA2.811e-1232.39Sporamin B OS=Ipomoea batatas GN=GSPO-B1 PE=2 SV=1[more]
SPOR2_IPOBA2.811e-1232.39Sporamin B OS=Ipomoea batatas PE=2 SV=1[more]
PIP21_PEA3.671e-1226.92Kunitz-type trypsin inhibitor-like 1 protein OS=Pi... [more]
KTI1_SOYBN1.068e-1128.06Kunitz-type trypsin inhibitor KTI1 OS=Glycine max ... [more]
ITRA_SOYBN1.822e-1129.80Trypsin inhibitor A OS=Glycine max GN=KTI3 PE=1 SV... [more]
IAAS_WHEAT1.822e-1130.25Endogenous alpha-amylase/subtilisin inhibitor OS=T... [more]
SPI7_SOLTU3.108e-1129.70Serine protease inhibitor 7 OS=Solanum tuberosum P... [more]
SPI6_SOLTU3.108e-1129.21Probable serine protease inhibitor 6 OS=Solanum tu... [more]
ICI2_CANLI3.108e-1129.12Subtilisin inhibitor CLSI-II OS=Canavalia lineata ... [more]
SPI1_SOLTU4.059e-1129.21Serine protease inhibitor 1 OS=Solanum tuberosum P... [more]

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Properties
Property NameValue
Genbank descriptionC31402A05EF CTVClemen1 Citrus clementina cDNA clone C31402A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875262 ID=FC875262; Name=FC875262; organism=Citrus clementina; type=EST; length=732bp
AAGTACTCACTCAATCAGCTCTCTGAAAGATAACAAAATGAGTACTCCTT
TTGTAACTGCAATCTCCTTCCTTGTCCTTACCTTTGCCACAAAACCGCTT
GTGGGACTCGCTGATCCTTTGGTTGATGTCAATGGCAACAAGGTCGAAGC
ATCCCGAGACTACTATTTGGTCTCAGCAATTCGAGGAGCAGGCGGCAGCG
GCCTCACCCTCTTCAGGGGCAGAAACGAACTCTGCCCACTTGATGTTGTC
CAACTAAGTTCCGACTCAGAAAGAGGAACCCGTTTAAGATTCTCAATGTA
TGATAAAACTAGTATTATCAATGAAGATGTGGATCTGAACGTGAGATTCT
CGACAGAGACTCGCTGCAACGAACCAACAGTATGGAGAGTCGACAGCTAT
GATCCATCGAGAGGAAAATGGTTTATAACAACTGGTGGTGTTGAAGGAAA
CCCTGGAGCTCAAACTTTGAAAAACTGGTTTAAGTTTGAGAGAATTGGAG
GAGATCGAGCTACGTACAAGATTGTTCACTGTCCTTCCGTTTGCGAATCC
TGTGTATCTTTATGCAATGATGTTGGGGTTTCTAACGATCATGCTCGACG
TTTGGCTCTCACTAACGGGCGCGCGCTTGCTGTTGTTCTAGTCCCTGGTA
ATGAGAGATCAGCCTCATGTGCGTCTTGAATGCCCTTGTATCATTACTCT
AAATATGGATCGGGCTAGCTCCTGACGCTTAT
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