FC875266
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL5I_ARATH (RING-H2 finger protein ATL5I OS=Arabidopsis thaliana GN=ATL5I PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.347e-15 Identity = 40/92 (43.48%), Postives = 52/92 (56.52%), Query Frame = 1 Query: 394 LDREVIDTFPTFVYSDVKTLKVGKGA-------LECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQP 648 LD+ ID P F Y ++ G G +CAVCL EF + + LRL+P C H FH CID WL+S++TCP+CR L S PG + P Sbjct: 108 LDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLFS-PGFSMENP 198
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL3J_ARATH (RING-H2 finger protein ATL3J OS=Arabidopsis thaliana GN=ATL3J PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.347e-15 Identity = 36/87 (41.38%), Postives = 54/87 (62.07%), Query Frame = 1 Query: 406 VIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQPSELGSS 666 V+D+ P F +S V + +CAVCL++FE ++ LRL+P C H FH +CID WL S+ TCP+CRS L + + + +GS+ Sbjct: 93 VLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRSPLFASESDLMKSLAVVGSN 179
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL4G_ARATH (RING-H2 finger protein ATL4G OS=Arabidopsis thaliana GN=ATL4G PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.003e-15 Identity = 37/91 (40.66%), Postives = 54/91 (59.34%), Query Frame = 1 Query: 394 LDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQPSELGSS 666 L+ +I + P F +S V L A+EC+VCL+EF+D+E+ R++P C H FH CID W SH++CP+CRS + G E+ S Sbjct: 52 LNPSIIKSLPIFTFSAVTALF----AMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFHSHSSCPLCRSQIEPFAGGVKSSMDEVAIS 138
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL1A_ARATH (RING-H2 finger protein ATL1A OS=Arabidopsis thaliana GN=ATL1A PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.003e-15 Identity = 36/85 (42.35%), Postives = 51/85 (60.00%), Query Frame = 1 Query: 394 LDREVIDTFPTFVYSDVKTLK----VGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGET 636 LD I P F + + K + EC+VCLNEF++DE LR+IP C HVFH +CID WL+ + CP+CR++++ E T Sbjct: 102 LDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFT 186
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL3G_ARATH (RING-H2 finger protein ATL3G OS=Arabidopsis thaliana GN=ATL3G PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 5.228e-15 Identity = 41/90 (45.56%), Postives = 51/90 (56.67%), Query Frame = 1 Query: 394 LDREVIDTFPTFVYSDVKTL---KVGKGAL----ECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTP 642 LD VI T P F+YS VGK + +CAVCL EFE+ + +R +P C H FH ECID WL SH CP+CR+ + G TP Sbjct: 121 LDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAILGSAGVLTP 210
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL5N_ARATH (Putative RING-H2 finger protein ATL5N OS=Arabidopsis thaliana GN=ATL5N PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.521e-14 Identity = 35/74 (47.30%), Postives = 47/74 (63.51%), Query Frame = 1 Query: 394 LDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNL 615 +D+ ID P Y + L+ +CAVCL EF ++ LRL+PKC H FH ECID WL +++TCP+CR NL Sbjct: 96 IDQSFIDALPLLHYKTMIGLR--HDLSDCAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNSTCPLCRDNL 167
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL4H_ARATH (Putative RING-H2 finger protein ATL4H OS=Arabidopsis thaliana GN=ATL4H PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.389e-14 Identity = 31/58 (53.45%), Postives = 43/58 (74.14%), Query Frame = 1 Query: 475 ECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQP 648 +C++CL EF +DE+LRL+PKC+H FH CID WL+SH+ CP+CR+ + TT QP Sbjct: 180 DCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKIIV---PTTQQP 234
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL4E_ARATH (RING-H2 finger protein ATL4E OS=Arabidopsis thaliana GN=ATL4E PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.389e-14 Identity = 35/92 (38.04%), Postives = 57/92 (61.96%), Query Frame = 1 Query: 394 LDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPG-ETTPQPSELGSS 666 L +++ + P +Y + +K +C+VCL +++ +E L+ +P C H FH ECID WL SHTTCP+CR +L +P + + Q +E+ SS Sbjct: 87 LSKDIREMLPVVIYKESFIVKDS----QCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSLIPKPSLDLSHQSTEIVSS 174
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL3E_ARATH (Putative RING-H2 finger protein ATL3E OS=Arabidopsis thaliana GN=ATL3E PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.389e-14 Identity = 30/61 (49.18%), Postives = 42/61 (68.85%), Query Frame = 1 Query: 463 KGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQ 645 K LEC VCL+E D + R++P CDH FH ECID+WL+S++TCP+CR + + T P+ Sbjct: 83 KYVLECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNSTCPICRKRVCLKQSRTRPE 143
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL2K_ARATH (RING-H2 finger protein ATL2K OS=Arabidopsis thaliana GN=ATL2K PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.389e-14 Identity = 36/87 (41.38%), Postives = 48/87 (55.17%), Query Frame = 1 Query: 394 LDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQPSE 654 LD VI + PTFV +K ECAVCL+ E+ + R++P C HVFH C+D WL + +TCPVCR+ P+P E Sbjct: 76 LDSLVIASLPTFVVG----IKNDVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAEPSHPRLEPEPRE 158 The following BLAST results are available for this feature:
BLAST of FC875266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875266 ID=FC875266; Name=FC875266; organism=Citrus clementina; type=EST; length=673bpback to top |