FC875267

Overview
NameFC875267
Unique NameFC875267
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875267 vs. ExPASy Swiss-Prot
Match: NAC74_ORYSJ (NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.640e-16
Identity = 46/149 (30.87%), Postives = 73/149 (48.99%), Query Frame = 2
Query:  119 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAVENSPDFEVLASVLELHMCCEI 565
            GF F+P D ++I     K+          I E+D+Y  EPW+LP   ++ +++  W+FF     K     R  R T  GYWK TG+   IK   +T  IGTKK L F        + +TEW++HE  ++   + +    + + ++ C I
Sbjct:   12 GFGFHPKDTELISHYLKKKIHGQKIEYEIIPEVDIYKHEPWDLPAKCDVPTQDNKWHFFAARDRKYPNGSRSNRATVAGYWKSTGKDRAIKMGKQT--IGTKKTLVFHEGRPPTGR-RTEWIMHEYYIDER-ECQACPDMKDAYVLCRI 156          
BLAST of FC875267 vs. ExPASy Swiss-Prot
Match: NAC3_ARATH (NAC domain-containing protein 3 OS=Arabidopsis thaliana GN=NAC003 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.640e-16
Identity = 52/132 (39.39%), Postives = 72/132 (54.55%), Query Frame = 2
Query:  104 MDSLVGFRFYPTDEQIIL-LLTMKRRDPAGFSV-RTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHE 493
            M++ VG RF PTDE+I++  L  K  D     V R I  + +   +PWELPC S I+ ++  W FF     K     +  R+TK G+WK TGR   I R    + IG KKIL F      +++ K++WVIHE
Sbjct:    1 METPVGLRFCPTDEEIVVDYLWPKNSDRDTSHVDRFINTVPVCRLDPWELPCQSRIKLKDVAWCFFRPKENKYGRGDQQMRKTKSGFWKSTGRPKPIMR--NRQQIGEKKILMF----YTSKESKSDWVIHE 126          
BLAST of FC875267 vs. ExPASy Swiss-Prot
Match: NA102_ARATH (NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.797e-16
Identity = 51/130 (39.23%), Postives = 65/130 (50.00%), Query Frame = 2
Query:  119 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAVEN 508
            GFRF+PTDE+++     +R      +V  I EIDLY F PWELP    +  E+E WYFF     K     R  R    GYWK TG    I    K + +G KK L F     A +  KT W++HE  + N
Sbjct:   53 GFRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELP-EMALYGEKE-WYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPIG---KPKTLGIKKALVFYA-GKAPKGIKTNWIMHEYRLAN 176          
BLAST of FC875267 vs. ExPASy Swiss-Prot
Match: NAC69_ARATH (NAC domain-containing protein 69 OS=Arabidopsis thaliana GN=NAC69 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.653e-16
Identity = 53/136 (38.97%), Postives = 72/136 (52.94%), Query Frame = 2
Query:  113 LVGFRFYPTDEQIIL-LLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTE-VIGTKKILSFSRDDAAAEKDKTEWVIHEIAVENSP 514
            LVG+RFYPT E++I   L  K           I EI++ S++P  LP  S+I+S++ VWYFFC   Y +A+ K  +R T  GYWK TG    IK K      IG KK L +  +    +   T WV+HE  +   P
Sbjct:    5 LVGYRFYPTGEELINHYLKNKILGKTWLVDEAISEINICSYDPIYLPSLSKIKSDDPVWYFFCPKEYTSAKKKVTKRTTSSGYWKATGVDRKIKDKRGNRGEIGIKKTLVY-YEGRVPKGVWTPWVMHEYHITCLP 139          
BLAST of FC875267 vs. ExPASy Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.653e-16
Identity = 49/130 (37.69%), Postives = 67/130 (51.54%), Query Frame = 2
Query:  119 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAVEN 508
            GFRF+PTDE++I      +    G S   I E+DL   EPWELP  +++   E  WYF+     K     R  R T  GYWK TG+   +      +++G KK L F +   A    KT+WV+HE  +EN
Sbjct:   25 GFRFHPTDEELITFYLASKIFHGGLSGIHISEVDLNRCEPWELPEMAKMGERE--WYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVFYK-GRAPRGLKTKWVMHEYRLEN 151          
BLAST of FC875267 vs. ExPASy Swiss-Prot
Match: NAC55_ARATH (NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.232e-16
Identity = 49/125 (39.20%), Postives = 66/125 (52.80%), Query Frame = 2
Query:  119 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHE 493
            GFRFYPTDE++++    ++     FS++ I EIDLY F+PW LP  S+    E+ WYFF     K     R  R    GYWK TG    I  + +   +G KK L F     A +  KT W++HE
Sbjct:   17 GFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLP--SKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRR--VGIKKALVF-YIGKAPKGTKTNWIMHE 136          
BLAST of FC875267 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.139e-16
Identity = 48/125 (38.40%), Postives = 66/125 (52.80%), Query Frame = 2
Query:  119 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHE 493
            GFRFYPTDE++++    ++     FS++ I +IDLY F+PW+LP  S+    E+ WYFF     K     R  R    GYWK TG    I    +   +G KK L F     A +  KT W++HE
Sbjct:   17 GFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLYKFDPWDLP--SKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRR--VGIKKALVFYA-GKAPKGTKTNWIMHE 136          
BLAST of FC875267 vs. ExPASy Swiss-Prot
Match: NAC19_ARATH (NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.388e-15
Identity = 48/125 (38.40%), Postives = 66/125 (52.80%), Query Frame = 2
Query:  119 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHE 493
            GFRFYPTDE++++    ++     FS++ I EIDLY F+PW LP  ++    E+ WYFF     K     R  R    GYWK TG    I    + + +G KK L F     A +  KT W++HE
Sbjct:   17 GFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLP--NKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIIST--EGQRVGIKKALVF-YIGKAPKGTKTNWIMHE 136          
BLAST of FC875267 vs. ExPASy Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.368e-15
Identity = 45/135 (33.33%), Postives = 68/135 (50.37%), Query Frame = 2
Query:  119 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNI--KRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAV-ENSP 514
            GFRF+PTDE++++    ++ D     V  I ++DLY F+PWELP  +    +E  WYFF     K     R  R    GYWK TG    +       ++ +G KK L F       +  K++W++HE  + +N P
Sbjct:   20 GFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELPAKASFGEQE--WYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVF-YSGKPPKGVKSDWIMHEYRLTDNKP 151          
BLAST of FC875267 vs. ExPASy Swiss-Prot
Match: NAC68_ORYSJ (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.039e-15
Identity = 44/125 (35.20%), Postives = 61/125 (48.80%), Query Frame = 2
Query:  119 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHE 493
            GFRF+PTDE++++    ++       V  I E+DLY  +PW+LP  +    +E  WYFF     K     R  R    GYWK TG    +  K     +G KK L F     A    KT+W++HE
Sbjct:   24 GFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALFGRKE--WYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVF-YSGKAPRGVKTDWIMHE 145          
The following BLAST results are available for this feature:
BLAST of FC875267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
NAC74_ORYSJ1.640e-1630.87NAC domain-containing protein 74 OS=Oryza sativa s... [more]
NAC3_ARATH1.640e-1639.39NAC domain-containing protein 3 OS=Arabidopsis tha... [more]
NA102_ARATH2.797e-1639.23NAC domain-containing protein 102 OS=Arabidopsis t... [more]
NAC69_ARATH3.653e-1638.97NAC domain-containing protein 69 OS=Arabidopsis th... [more]
NAC31_ARATH3.653e-1637.69Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thal... [more]
NAC55_ARATH6.232e-1639.20NAC domain-containing protein 55 OS=Arabidopsis th... [more]
NAC72_ARATH8.139e-1638.40NAC domain-containing protein 72 OS=Arabidopsis th... [more]
NAC19_ARATH1.388e-1538.40NAC domain-containing protein 19 OS=Arabidopsis th... [more]
NAC18_ARATH2.368e-1533.33NAC domain-containing protein 18 OS=Arabidopsis th... [more]
NAC68_ORYSJ4.039e-1535.20NAC domain-containing protein 68 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionC31402A11EF CTVClemen1 Citrus clementina cDNA clone C31402A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875267 ID=FC875267; Name=FC875267; organism=Citrus clementina; type=EST; length=678bp
GACTGGCTCTTTTAAGATTTTGCTGACCAAATTGGAAAGAAGAAGCTCTT
ACTCTCTCATTCTTGTTCTACGTTTCTCCTGCTGGGTGTTGAATCAGAAA
CCAATGGACAGTCTCGTGGGGTTCAGATTCTATCCAACTGATGAACAAAT
TATTCTTCTACTGACGATGAAGAGACGTGACCCTGCAGGTTTCTCCGTCC
GTACGATCAAGGAAATCGATCTCTACAGCTTTGAGCCCTGGGAGCTACCC
TGCCATTCTGAGATTCAGTCTGAGGAAGAAGTGTGGTACTTTTTCTGTGA
ACCTTGTTACAAAAATGCCGAGAGTAAACGGGTACGTAGAAGAACAAAGG
AAGGCTATTGGAAAAAGACTGGCAGAGGTTCTAACATCAAGCGCAAATAC
AAAACTGAGGTGATTGGTACGAAGAAGATTTTGTCTTTTTCCCGCGATGA
TGCTGCTGCCGAGAAAGATAAGACTGAGTGGGTTATACACGAGATAGCTG
TTGAAAATAGCCCTGACTTTGAGGTATTAGCCTCTGTTTTAGAACTGCAT
ATGTGTTGTGAAATTGTCTGTTTATTTTCTTGAAAAATAATTGTAAAATA
CTCTGTTCCTGTTATTGCAGAAGGATTTTGTTGTGTGTCGCCTTGAAAGA
AACGGGAGAAGAGACGCTTGGTGTTGTT
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