FC875276
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875276 vs. ExPASy Swiss-Prot
Match: RL15E_HALMA (50S ribosomal protein L15e OS=Haloarcula marismortui GN=rpl15e PE=1 SV=3) HSP 1 Score: 130.568 bits (327), Expect = 7.853e-30 Identity = 75/188 (39.89%), Postives = 101/188 (53.72%), Query Frame = 1 Query: 61 AYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 624 AY+++ + W+ + LQ R E+R ++ R+ RPTR DKAR GYKAKQ K QGVT++ ++ + VAEERA R LRVLNSY + +D K+ EVIL+DP H AI+ND ++W+C R RGLT AG++ RGL GKG K RPS R+ Sbjct: 5 AYSYIRDAWKNPGDGQLAELQWQRQQEWRNEGAVERIERPTRLDKARSQGYKAKQGVIVARVSVRKGSARKRRHKAGRRSK--RQGVTRITRRKDIQRVAEERASRTFPNLRVLNSYSVGQDGRQKWHEVILIDPNHPAIQNDDDLSWICADDQADRVFRGLTGAGRRNRGLSGKGKGSEKTRPSLRS 190
BLAST of FC875276 vs. ExPASy Swiss-Prot
Match: RL15E_SULIY (50S ribosomal protein L15e OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl15e PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.750e-29 Identity = 74/187 (39.57%), Postives = 103/187 (55.08%), Query Frame = 1 Query: 55 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRG----KGHLHHK 603 + Y ++ W ++ + + R R E+R+ PSIVR+ +PTR ++AR LGYKAKQ +P GV + + +AEERA RK L VL SY++ ED YKY+E+I+VDP+H I+NDP WL +P +++R RGLTSAGKK RGLR KG + HK Sbjct: 3 LSVYHYIENTWNSEEWK--KGVLRQRFIEWRKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNK--GRRPKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFRGLTSAGKKARGLRKSKGFKGTVKHK 185
BLAST of FC875276 vs. ExPASy Swiss-Prot
Match: RL15E_SULIN (50S ribosomal protein L15e OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl15e PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.750e-29 Identity = 74/187 (39.57%), Postives = 103/187 (55.08%), Query Frame = 1 Query: 55 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRG----KGHLHHK 603 + Y ++ W ++ + + R R E+R+ PSIVR+ +PTR ++AR LGYKAKQ +P GV + + +AEERA RK L VL SY++ ED YKY+E+I+VDP+H I+NDP WL +P +++R RGLTSAGKK RGLR KG + HK Sbjct: 3 LSVYHYIENTWNSEEWK--KGVLRQRFIEWRKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNK--GRRPKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFRGLTSAGKKARGLRKSKGFKGTVKHK 185
BLAST of FC875276 vs. ExPASy Swiss-Prot
Match: RL15E_SULIM (50S ribosomal protein L15e OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl15e PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.750e-29 Identity = 74/187 (39.57%), Postives = 103/187 (55.08%), Query Frame = 1 Query: 55 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRG----KGHLHHK 603 + Y ++ W ++ + + R R E+R+ PSIVR+ +PTR ++AR LGYKAKQ +P GV + + +AEERA RK L VL SY++ ED YKY+E+I+VDP+H I+NDP WL +P +++R RGLTSAGKK RGLR KG + HK Sbjct: 3 LSVYHYIENTWNSEEWK--KGVLRQRFIEWRKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNK--GRRPKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFRGLTSAGKKARGLRKSKGFKGTVKHK 185
BLAST of FC875276 vs. ExPASy Swiss-Prot
Match: RL15E_SULIL (50S ribosomal protein L15e OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl15e PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.750e-29 Identity = 74/187 (39.57%), Postives = 103/187 (55.08%), Query Frame = 1 Query: 55 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRG----KGHLHHK 603 + Y ++ W ++ + + R R E+R+ PSIVR+ +PTR ++AR LGYKAKQ +P GV + + +AEERA RK L VL SY++ ED YKY+E+I+VDP+H I+NDP WL +P +++R RGLTSAGKK RGLR KG + HK Sbjct: 3 LSVYHYIENTWNSEEWK--KGVLRQRFIEWRKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNK--GRRPKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFRGLTSAGKKARGLRKSKGFKGTVKHK 185
BLAST of FC875276 vs. ExPASy Swiss-Prot
Match: RL15E_SULIK (50S ribosomal protein L15e OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl15e PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.750e-29 Identity = 74/187 (39.57%), Postives = 103/187 (55.08%), Query Frame = 1 Query: 55 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRG----KGHLHHK 603 + Y ++ W ++ + + R R E+R+ PSIVR+ +PTR ++AR LGYKAKQ +P GV + + +AEERA RK L VL SY++ ED YKY+E+I+VDP+H I+NDP WL +P +++R RGLTSAGKK RGLR KG + HK Sbjct: 3 LSVYHYIENTWNSEEWK--KGVLRQRFIEWRKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNK--GRRPKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFRGLTSAGKKARGLRKSKGFKGTVKHK 185
BLAST of FC875276 vs. ExPASy Swiss-Prot
Match: RL15E_SULIA (50S ribosomal protein L15e OS=Sulfolobus islandicus (strain M.16.27) GN=rpl15e PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.750e-29 Identity = 74/187 (39.57%), Postives = 103/187 (55.08%), Query Frame = 1 Query: 55 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRG----KGHLHHK 603 + Y ++ W ++ + + R R E+R+ PSIVR+ +PTR ++AR LGYKAKQ +P GV + + +AEERA RK L VL SY++ ED YKY+E+I+VDP+H I+NDP WL +P +++R RGLTSAGKK RGLR KG + HK Sbjct: 3 LSVYHYIENTWNSEEWK--KGVLRQRFIEWRKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNK--GRRPKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFRGLTSAGKKARGLRKSKGFKGTVKHK 185
BLAST of FC875276 vs. ExPASy Swiss-Prot
Match: RL15E_METAC (50S ribosomal protein L15e OS=Methanosarcina acetivorans GN=rpl15e PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.750e-29 Identity = 73/188 (38.83%), Postives = 102/188 (54.26%), Query Frame = 1 Query: 64 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQ-GVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 624 Y +V + W+ + L+ R +R+ S+ R+ RPTR D+AR LGYKAKQ G+ T + G ++ S + +AE RA R+ L VLNSYW+ ED +K+FEVILVDP H I++D +NW+C+P + R RG TSAG+K RG+ +G K RPS RA Sbjct: 6 YGYVRDAWKNPDETYVNELRWERLQVWRKQGSVTRIERPTRIDRARSLGYKAKQGIVVVRVNVRRGGLGHVRPNR---GRRTQKMGKNKVSGGMSIQRIAEVRADRRYPNLEVLNSYWVGEDGKHKWFEVILVDPHHPVIKSDKNLNWVCDPSSRGRATRGKTSAGRKGRGMATRGKGTEKTRPSIRA 190
BLAST of FC875276 vs. ExPASy Swiss-Prot
Match: RL15E_UNCMA (50S ribosomal protein L15e OS=Uncultured methanogenic archaeon RC-I GN=rpl15e PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.984e-29 Identity = 72/192 (37.50%), Postives = 105/192 (54.69%), Query Frame = 1 Query: 61 AYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 636 AY+++ + W+ + L R E+R+ P++V++ RPTR D+AR LGYKAKQ K + G+ L + S + +AE RA RK + VLNSYW+ +D +K++E+ILVDP H +I +D ++W+ H+ R RGLTSAGKK RG R KG K PS +A +R Sbjct: 5 AYSYIRDAWKNPSKTYVGELFWERLQEWRKEPTVVKIDRPTRLDRARALGYKAKQGIIVARAHVRRGGRRKSRYSR--GRKSKHMGLRTLTRRTSIQRMAEVRASRKFPNMEVLNSYWVGQDGKHKWYEIILVDPHHPSIASDKNLSWITKGTHRGRAERGLTSAGKKGRGQRRKGKGTEKNYPSVQAHDRR 194
BLAST of FC875276 vs. ExPASy Swiss-Prot
Match: RL15E_SULTO (50S ribosomal protein L15e OS=Sulfolobus tokodaii GN=rpl15e PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.984e-29 Identity = 73/184 (39.67%), Postives = 103/184 (55.98%), Query Frame = 1 Query: 64 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGL---RG-KGHLHHK 603 Y ++ + W QSD + + R R E+R+ P++ R+ +PTR ++AR +GYKAKQ +P GV + R +AEE+A RK L VL SY++ ED YKY+E+I+VDP H I++DP + WL +P ++ R RGLTSAGKK RGL RG KG + HK Sbjct: 6 YNYIEQTW---QSDEWKKVLRQRLIEWRKSPAVERIDKPTRLNRARAIGYKAKQGFVVVRVRVRRGGLNKPRPNS--GRRPKRMGVYGYSPAKGYRWIAEEKAARKFPNLEVLGSYYVGEDGMYKYYEIIMVDPNHPVIKSDPNLKWLQDPANRKRVFRGLTSAGKKARGLLKSRGLKGTVKHK 184 The following BLAST results are available for this feature:
BLAST of FC875276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 93
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875276 ID=FC875276; Name=FC875276; organism=Citrus clementina; type=EST; length=689bpback to top |