FC875475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_BURA4 (Aminomethyltransferase OS=Burkholderia ambifaria (strain MC40-6) GN=gcvT PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.297e-14 Identity = 45/123 (36.59%), Postives = 60/123 (48.78%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLA 584 L T L+ H A +MV F GW MP+ Y I E R + +FDVSHMC + G F E + +V L PG + N GG IDD ++ +D +VVNAG +KD+A Sbjct: 4 LNHTPLNAAHRALNARMVDFGGWDMPVNYGSQIEEHEA-VRTDAGMFDVSHMCVVDFTGSRVRAFFEHAIANNVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEDFFRVVVNAGTAEKDIA 125
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SYNP6 (Aminomethyltransferase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=gcvT PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.625e-14 Identity = 42/133 (31.58%), Postives = 70/133 (52.63%), Query Frame = 3 Query: 216 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVI--TKVKD--DHIYLVVNAGCRDKDLAHIEAHM 602 +L + LH + G + FAGW +P+Q++ +M+ L R+ LFD+SHM L+G L++L+ +D+ L PG +V NE GG +DD ++ + D + +L+VNA D D + H+ Sbjct: 8 SLLSSPLHSVCTSAGARFTGFAGWELPLQFQ-GLMQEHLAVRERAGLFDISHMGKFQLRGSGLRAALQRLLPSDLTTLLPGQAQYSVLLNEAGGCLDDLIVYWQGIVDGVEQAFLIVNAATTDSDRLWLTEHL 139
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SYNE7 (Aminomethyltransferase OS=Synechococcus elongatus (strain PCC 7942) GN=gcvT PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.625e-14 Identity = 42/133 (31.58%), Postives = 70/133 (52.63%), Query Frame = 3 Query: 216 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVI--TKVKD--DHIYLVVNAGCRDKDLAHIEAHM 602 +L + LH + G + FAGW +P+Q++ +M+ L R+ LFD+SHM L+G L++L+ +D+ L PG +V NE GG +DD ++ + D + +L+VNA D D + H+ Sbjct: 8 SLLSSPLHSVCTSAGARFTGFAGWELPLQFQ-GLMQEHLAVRERAGLFDISHMGKFQLRGSGLRAALQRLLPSDLTTLLPGQAQYSVLLNEAGGCLDDLIVYWQGIVDGVEQAFLIVNAATTDSDRLWLTEHL 139
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SACD2 (Aminomethyltransferase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=gcvT PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.625e-14 Identity = 47/132 (35.61%), Postives = 67/132 (50.76%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 L +T L H GGKMV F GW MP+ Y + E R + +FDVSHM + + G FL+ ++ DVA L G + N GG +DD ++ ++ + +VVN R+KDLA + H K F Sbjct: 2 LNETVLAPLHREIGGKMVDFGGWDMPLHYGSQVEEHQ-KVRTDAGMFDVSHMTVVDVTGAGAKTFLQYVLANDVAKLTKNGKALYSGMLNHEGGVVDDLIVYLMEWGY-RVVVNCATREKDLAWMVEHAKGF 131
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_BURVG (Aminomethyltransferase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=gcvT PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.625e-14 Identity = 45/123 (36.59%), Postives = 60/123 (48.78%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLA 584 L T L+ H A +MV F GW MP+ Y I E R + +FDVSHMC + G F E + +V L PG + N GG IDD ++ +D +VVNAG +KD+A Sbjct: 4 LNHTPLNAAHRALNARMVDFGGWDMPVNYGSQIEEHEA-VRTDAGMFDVSHMCVVDFTGSRVRAFFEHALANNVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEDFFRVVVNAGTAEKDIA 125
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_PROMS (Aminomethyltransferase OS=Prochlorococcus marinus (strain AS9601) GN=gcvT PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.346e-14 Identity = 46/134 (34.33%), Postives = 75/134 (55.97%), Query Frame = 3 Query: 216 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKV---KDD--HIYLVVNAGCRDKDLAHIEAHM 602 +L K+ L+ +V + K+V FAGW MPI + I E + R + LFD+SHM +S+KG + +++KL ++ G G TV N+ GG IDD +I + K+D + L+VNA ++D I+ ++ Sbjct: 2 DLLKSPLYSKYVESNAKLVDFAGWEMPISFSGLIKEHE-SVRYSAGLFDISHMGVISIKGINPKDYIQKLFPTNLYSFCEGQGLYTVMLNDKGGIIDDLIIYDLGIQKNDISELLLIVNASRYEEDFQWIKNNL 134
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_BURS3 (Aminomethyltransferase OS=Burkholderia sp. (strain 383) GN=gcvT PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.594e-14 Identity = 44/123 (35.77%), Postives = 60/123 (48.78%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLA 584 L T L+ H A +MV F GW MP+ Y I E R + +FDVSHMC + G F E + +V L PG + N GG IDD ++ ++ +VVNAG +KD+A Sbjct: 4 LNHTPLNAAHRALNARMVDFGGWDMPVNYGSQIEEHEA-VRTDAGMFDVSHMCVVDFTGSRVRAFFEHAIANNVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEEFFRVVVNAGTAEKDIA 125
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_MYCLE (Aminomethyltransferase OS=Mycobacterium leprae GN=gcvT PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.253e-13 Identity = 42/119 (35.29%), Postives = 60/119 (50.42%), Query Frame = 3 Query: 204 SDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNA 560 +DA L K L D H G F GW MP+ Y ++ E + R LFDVSH+ ++G F+ ++ D+ + PG T+ +E+GG IDD + V DD I+LV NA Sbjct: 2 TDAPELLKGPLEDRHRELGANFAEFGGWLMPVSYAGTVSEHSAT-RNAVGLFDVSHLGKALVRGPGAAQFVNSVLTNDLGRIRPGKAQYTLCCSESGGVIDDLIAYYVDDDEIFLVSNA 119
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_MYCLB (Aminomethyltransferase OS=Mycobacterium leprae (strain Br4923) GN=gcvT PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.253e-13 Identity = 42/119 (35.29%), Postives = 60/119 (50.42%), Query Frame = 3 Query: 204 SDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNA 560 +DA L K L D H G F GW MP+ Y ++ E + R LFDVSH+ ++G F+ ++ D+ + PG T+ +E+GG IDD + V DD I+LV NA Sbjct: 2 TDAPELLKGPLEDRHRELGANFAEFGGWLMPVSYAGTVSEHSAT-RNAVGLFDVSHLGKALVRGPGAAQFVNSVLTNDLGRIRPGKAQYTLCCSESGGVIDDLIAYYVDDDEIFLVSNA 119
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_LISIN (Aminomethyltransferase OS=Listeria innocua GN=gcvT PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.253e-13 Identity = 40/120 (33.33%), Postives = 61/120 (50.83%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKD 578 L KT +H + G K + F GW +P+Q+ E R + LFDVSHM + ++G D +L+ L+ D+ + G + E GG++DD V+ K + LVVNA +KD Sbjct: 4 LLKTPIHPLYAKYGAKTIDFGGWDLPVQFAGIKAEHEA-VRTDAGLFDVSHMGEILVEGPDSTSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTEKD 122 The following BLAST results are available for this feature:
BLAST of FC875475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 328
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875475 ID=FC875475; Name=FC875475; organism=Citrus clementina; type=EST; length=665bpback to top |