FC875475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_BURCC (Aminomethyltransferase OS=Burkholderia cenocepacia (strain MC0-3) GN=gcvT PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.253e-13 Identity = 44/123 (35.77%), Postives = 59/123 (47.97%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLA 584 L T L+ H A +MV F GW MP+ Y I E R + +FDVSHMC + G F E + V L PG + N GG IDD ++ ++ +VVNAG +KD+A Sbjct: 4 LNHTPLNAAHRALNARMVDFGGWDMPVNYGSQIEEHAA-VRTDAGMFDVSHMCVVDFTGSRVRAFFEHAIANHVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEEFFRVVVNAGTAEKDIA 125
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_PROM2 (Aminomethyltransferase OS=Prochlorococcus marinus (strain MIT 9215) GN=gcvT PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.636e-13 Identity = 45/134 (33.58%), Postives = 76/134 (56.72%), Query Frame = 3 Query: 216 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKV---KDD--HIYLVVNAGCRDKDLAHIEAHM 602 +L K+ L+ +V + K+V FAGW MPI + I E + R + LFD+SHM +S+KG + +++KL ++ + G G TV N+ GG IDD +I + ++D + L+VNA ++D I+ ++ Sbjct: 2 DLLKSPLYSKYVESNAKLVNFAGWEMPISFSGLIKEHE-SVRSSAGLFDISHMGVISIKGINPKDYIQKLFPTNLYSFSEGQGLYTVMLNDKGGIIDDLIIYDLGIQENDLSELLLIVNASRYEEDFQWIKNNL 134
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_PROM0 (Aminomethyltransferase OS=Prochlorococcus marinus (strain MIT 9301) GN=gcvT PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.137e-13 Identity = 43/134 (32.09%), Postives = 76/134 (56.72%), Query Frame = 3 Query: 216 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKV---KDD--HIYLVVNAGCRDKDLAHIEAHM 602 +L+K+ L+ ++ + K+V FAGW MPI + I E + R + LFD+SHM +S+KG + +++K ++ + G G TV N+ GG IDD +I + ++D + L+VNA ++D I+ ++ Sbjct: 2 DLRKSPLYSKYIESNAKLVDFAGWEMPISFSGLIKEHE-SVRSSAGLFDISHMGVISVKGINPKDYIQKFFPTNLYSFSEGQGLYTVMLNDKGGIIDDLIIYDLGIQENDITELLLIVNASRYEEDFQWIKNNL 134
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_LISMH (Aminomethyltransferase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=gcvT PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.137e-13 Identity = 44/139 (31.65%), Postives = 68/139 (48.92%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 635 L KT +H + G K + F GW +P+Q+ E R + LFDVSHM + ++G D +L+ L+ D+ + G + E GG++DD V+ K + LVVNA KD + +++ GDVS Sbjct: 4 LLKTPIHPLYAKYGAKTIDFGGWDLPVQFAGIKAEHEA-VRTDAGLFDVSHMGEILVEGPDSTSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTAKDFEWMVKNIQ------GDVS 135
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_HALHL (Aminomethyltransferase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=gcvT PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.137e-13 Identity = 48/140 (34.29%), Postives = 68/140 (48.57%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL--APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHI--EAHMKSFTAKGGD 629 ++T L+D HV G ++V FAGW MP+ Y + E R + LFDVSHM L G L + + DVA L PG + N GG +DD ++ +D +V NA R+K + +AH TA+ D Sbjct: 3 QRTPLYDQHVGAGARVVDFAGWEMPLHYGSQLAEHQA-VRSDVGLFDVSHMAVTDLSGPGARALLREQLANDVAKLDGRPGQALYSCLLNGRGGVVDDLIVYLREDASYRVVSNAATREKVRPRLLEQAHAAGVTAEARD 141
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_CORJK (Aminomethyltransferase OS=Corynebacterium jeikeium (strain K411) GN=gcvT PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.791e-13 Identity = 40/131 (30.53%), Postives = 67/131 (51.15%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 LKKTALH H G + F GW MP++Y + E R +FD+SHM + + G FL+ +I+ ++ + G ++ E+GG IDD + ++ D+ +V NAG D ++ ++ + F Sbjct: 4 LKKTALHLVHEKLGARFTDFGGWDMPLKYSSELDEHHA-VRNAVGVFDLSHMGEVRVTGPQAAEFLDHALISKLSAVKVGKAKYSMICTESGGIIDDLITYRLGDNEFLIVPNAGNVDNVVSALQGRTEGF 133
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_THEON (Probable aminomethyltransferase OS=Thermococcus onnurineus (strain NA1) GN=gcvT PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.219e-13 Identity = 46/144 (31.94%), Postives = 75/144 (52.08%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDE 653 K+ + D+H N K+ FAGW MPI Y SI + L R ++FDVSHM KGKD + FL+ + D++ +GT T+ NE G D++++ + +D +V ++ +K A A +K K G++ I ++ Sbjct: 3 KRVHIFDWHKKNAKKVEEFAGWEMPIWYS-SIKDEHLAVRNGVAIFDVSHMGEFIFKGKDALEFLQYVTTNDISKPPAISGTYTLVLNERGAVKDETLVFNMGNDTYMMVCDSDAFEKLEAWFNA-IKRGIEKFGELDLEIENK 144
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_PYRKO (Probable aminomethyltransferase OS=Pyrococcus kodakaraensis GN=gcvT PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.219e-13 Identity = 46/145 (31.72%), Postives = 75/145 (51.72%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDE 653 +K+ + D+H + K+ FAGW MPI Y SI E L R +FDVSHM +GKD + FL+ + D++ +GT T+ NE G D++++ + +D +V ++ +K A A +K K GD+ I ++ Sbjct: 2 VKRVHIFDWHKEHAKKVEEFAGWEMPIWYS-SIKEEHLAVRNGVGIFDVSHMGEFIFRGKDALEFLQYVTTNDISKPPAISGTYTLVLNERGAVKDETLVFNMGNDTYMMVCDSDAFEKLDAWFNA-IKRGIEKFGDIDLEIENK 144
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_PROMP (Aminomethyltransferase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=gcvT PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.122e-13 Identity = 42/136 (30.88%), Postives = 72/136 (52.94%), Query Frame = 3 Query: 216 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKD-----DHIYLVVNAGCRDKDLAHIEAHMKS 608 +L K+ L+ ++ + K+V FAGW MPI + I E + R + FD+SHM +SL+G + +++K ++ + G G T+ NE GG IDD +I + I+L+VNA D + I+ ++ + Sbjct: 2 DLLKSPLYSKYIESNAKLVNFAGWEMPISFSGLINEHE-SVRTSAGFFDISHMGVISLRGINPKEYIQKFFPTNLYSFSEGQGLYTLMLNEKGGIIDDLIIYDLGQQEEDISEIFLIVNASRYQTDFSWIKNNLNT 136
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_STRCO (Aminomethyltransferase OS=Streptomyces coelicolor GN=gcvT PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.061e-12 Identity = 40/146 (27.40%), Postives = 72/146 (49.32%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDER 656 L++TAL H A G M FAGW MP++Y S E + R LFD+SHM +++ G L ++ ++ + PG T+ E+GG +DD ++ ++++ +V NA ++ + + + T + + D+R Sbjct: 6 LRRTALDATHRALGATMTDFAGWDMPLRY-GSEREEHVAVRTRAGLFDLSHMGEITVTGPQAAELLNFALVGNIGTVKPGRARYTMICREDGGILDDLIVYRLEEAEYMVVANA-------SNAQVVLDALTERAAGFDAEVRDDR 143 The following BLAST results are available for this feature:
BLAST of FC875475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 328
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875475 ID=FC875475; Name=FC875475; organism=Citrus clementina; type=EST; length=665bpback to top |