FC875475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_THEGJ (Probable aminomethyltransferase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=gcvT PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.363e-12 Identity = 45/145 (31.03%), Postives = 74/145 (51.03%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDE 653 +K+ + D+H + K+ FAGW MPI Y SI E L R +FDVSHM +GKD + FL+ + D++ +GT T+ NE G D++++ + +D +V ++ +K A A +K K G + I ++ Sbjct: 2 VKRVHIFDWHKEHAKKVEEFAGWEMPIWYS-SIKEEHLAVRNGVGIFDVSHMGEFIFRGKDALEFLQYVTTNDISKPPAISGTYTLVLNERGAVKDETLVFNLGNDTYMMVCDSDAFEKLEAWFNA-IKRGIEKFGSIDLEIENK 144
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_MYCTU (Aminomethyltransferase OS=Mycobacterium tuberculosis GN=gcvT PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.363e-12 Identity = 41/119 (34.45%), Postives = 55/119 (46.22%), Query Frame = 3 Query: 204 SDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNA 560 SD L L D H G F GW MP+ Y ++ E R LFDVSH+ ++G F+ + D+ + PG T+ E+GG IDD + V DD I+LV NA Sbjct: 2 SDVPELIHGPLEDRHRELGASFAEFGGWLMPVSYAGTVSEHNAT-RTAVGLFDVSHLGKALVRGPGAAQFVNSALTNDLGRIGPGKAQYTLCCTESGGVIDDLIAYYVSDDEIFLVPNA 119
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_MYCBO (Aminomethyltransferase OS=Mycobacterium bovis GN=gcvT PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.363e-12 Identity = 41/119 (34.45%), Postives = 55/119 (46.22%), Query Frame = 3 Query: 204 SDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNA 560 SD L L D H G F GW MP+ Y ++ E R LFDVSH+ ++G F+ + D+ + PG T+ E+GG IDD + V DD I+LV NA Sbjct: 2 SDVPELIHGPLEDRHRELGASFAEFGGWLMPVSYAGTVSEHNAT-RTAVGLFDVSHLGKALVRGPGAAQFVNSALTNDLGRIGPGKAQYTLCCTESGGVIDDLIAYYVSDDEIFLVPNA 119
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_BACSK (Aminomethyltransferase OS=Bacillus clausii (strain KSM-K16) GN=gcvT PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.363e-12 Identity = 40/128 (31.25%), Postives = 65/128 (50.78%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHM 602 L +T L++ + G K V F GW +P+ + I + R LFDVSHM L ++G D + L+ LV D++ L E+GG++DD ++ + ++ LV+NA D+ I AH+ Sbjct: 5 LLRTPLYELYDQAGAKTVDFGGWELPVSFS-GIKKEHHAVRNAAGLFDVSHMGELLVEGPDALNNLQALVTNDLSKLQDNQAQYNAMCTESGGTVDDLIVYRRNENAYLLVLNAANIQSDIEWIRAHV 131
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SACEN (Aminomethyltransferase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=gcvT PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.086e-12 Identity = 39/138 (28.26%), Postives = 64/138 (46.38%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 635 ++T LH+ H A G FAGW MP++Y E R LFD++HM + + G L+ ++A+ + + G T+ N GG +DD ++ ++ + +V NA A + + F A DVS Sbjct: 5 RQTPLHEIHEALGATFTEFAGWRMPLRYTGDAAEHNA-VRTAAGLFDLTHMGEIRISGPQAPEALDYALVANASAITVGRARYTMICNSEGGVLDDLIVYRLGEQEYLVVANAANAAVVSAELAERVARFEASHEDVS 141
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_PYRFU (Probable aminomethyltransferase OS=Pyrococcus furiosus GN=gcvT PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.086e-12 Identity = 44/146 (30.14%), Postives = 75/146 (51.37%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLA---HIEAHMKSFTAKGGDVSWHIHD 650 K+ L D+H + K+ FAGW MPI Y SI E L R +FDVSHM + KGKD + FL+ D++ +GT T+ NE G D++++ + ++ ++ +A +K A +++ ++ FT ++ +D Sbjct: 3 KRVHLFDWHKEHAKKIEEFAGWEMPIWYS-SIKEEHLAVRNAVGVFDVSHMGEILFKGKDALKFLQYTTTNDISKPPAISGTYTLVLNERGAIKDETLVFNMGNNEYLMICDADAFEKLYAWFTYLKKTIEQFTKLDLEIELKTYD 147
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_PROM5 (Aminomethyltransferase OS=Prochlorococcus marinus (strain MIT 9515) GN=gcvT PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.086e-12 Identity = 41/136 (30.15%), Postives = 71/136 (52.21%), Query Frame = 3 Query: 216 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKV-----KDDHIYLVVNAGCRDKDLAHIEAHMKS 608 +L K+ L+ ++ + K++ FAGW MPI + I E + R + FD+SHM +SL+G + +++K ++ + G G T+ NE GG IDD +I + I+L+VNA D I+ ++ + Sbjct: 2 DLLKSPLYSKYIESNAKLINFAGWEMPISFSGLINEHE-SVRTSAGFFDISHMGVISLRGINPKEYIQKFFPTNLYSFSEGQGLYTLILNEKGGIIDDLIIYDLGRQEGDISEIFLIVNASRYQDDFLWIKNNLNT 136
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_MYCPA (Aminomethyltransferase OS=Mycobacterium paratuberculosis GN=gcvT PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.031e-12 Identity = 41/119 (34.45%), Postives = 57/119 (47.90%), Query Frame = 3 Query: 204 SDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNA 560 S+ +L L D H G F GW MP+ Y ++ E R LFDVSH+ ++G F+ + D+ + PG T+ NE+GG IDD + V DD I+LV NA Sbjct: 2 SNEADLLHGPLEDRHRDLGASFAEFGGWLMPVSYAGTVSEHNAT-RNAVGLFDVSHLGKALVRGTGAARFVNSALTNDLNRIGPGKAQYTLCCNESGGVIDDLIAYYVDDDEIFLVPNA 119
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_MYCA1 (Aminomethyltransferase OS=Mycobacterium avium (strain 104) GN=gcvT PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.031e-12 Identity = 41/119 (34.45%), Postives = 57/119 (47.90%), Query Frame = 3 Query: 204 SDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNA 560 S+ +L L D H G F GW MP+ Y ++ E R LFDVSH+ ++G F+ + D+ + PG T+ NE+GG IDD + V DD I+LV NA Sbjct: 2 SNEADLLHGPLEDRHRDLGASFAEFGGWLMPVSYAGTVSEHNAT-RNAVGLFDVSHLGKALVRGTGAARFVNSALTNDLNRIGPGKAQYTLCCNESGGVIDDLIAYYVDDDEIFLVPNA 119
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_PROAC (Aminomethyltransferase OS=Propionibacterium acnes GN=gcvT PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.264e-12 Identity = 40/139 (28.78%), Postives = 64/139 (46.04%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 635 L++T L H + G FAGW+MP++Y + E R+N +FD+SHM + + G D L+ + ++ +A G ++ + GG +DD V + D +V NA + DLA F D S Sbjct: 4 LRRTPLAAVHESLGASFTDFAGWNMPVRYSSDLAEHHA-VRKNAGIFDLSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGDYLVVANAANAETDLAEFTKRCARFDVTVTDES 141 The following BLAST results are available for this feature:
BLAST of FC875475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 328
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875475 ID=FC875475; Name=FC875475; organism=Citrus clementina; type=EST; length=665bpback to top |