FC875475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_ARATH (Aminomethyltransferase, mitochondrial OS=Arabidopsis thaliana GN=GDCST PE=1 SV=1) HSP 1 Score: 334.339 bits (856), Expect = 3.334e-91 Identity = 159/185 (85.95%), Postives = 177/185 (95.68%), Query Frame = 3 Query: 111 MRGGSLWQLGQSITRRLALADKKTIARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLL 665 MRGGSLWQLGQSITRRLA +DKK ++RR+FAS+A+ LKKTAL+DFHVA+GGKMVPFAGWSMPIQYKDSIM+ST+NCR+NGSLFDV+HMCGLSLKGKDCVPFLE LV+ADVAGLAPGTG+LTVFTNE GG+IDDSVITKV D+HIYLVVNAGCRDKDLAHIE HMK+F +KGGDVSWHIHDERSLL Sbjct: 1 MRGGSLWQLGQSITRRLAQSDKKVVSRRYFASEAD-LKKTALYDFHVAHGGKMVPFAGWSMPIQYKDSIMDSTVNCRENGSLFDVAHMCGLSLKGKDCVPFLETLVVADVAGLAPGTGSLTVFTNEKGGAIDDSVITKVTDEHIYLVVNAGCRDKDLAHIEEHMKAFKSKGGDVSWHIHDERSLL 184
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_MESCR (Aminomethyltransferase, mitochondrial OS=Mesembryanthemum crystallinum GN=GDCST PE=2 SV=1) HSP 1 Score: 331.643 bits (849), Expect = 2.161e-90 Identity = 157/185 (84.86%), Postives = 174/185 (94.05%), Query Frame = 3 Query: 111 MRGGSLWQLGQSITRRLALADKKTIARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLL 665 MRGG LWQLGQS+TRRLA A+KK IARR FAS+A+ LKKTAL+DFHVANGGKMVPFAGWSMPIQYKDSIM+ST+NCR+NGSLFDV+HMCGLSLKGKDC+PFLEKLV+ D+AGLAPGTGTL+V TNE GG+IDD+VITKV DDHIYLVVNAGCR+KDLAHIE HMK+F AKGGDVSWHIHDERSLL Sbjct: 1 MRGGGLWQLGQSVTRRLAQAEKKVIARRCFASEAD-LKKTALYDFHVANGGKMVPFAGWSMPIQYKDSIMDSTINCRENGSLFDVAHMCGLSLKGKDCIPFLEKLVVGDIAGLAPGTGTLSVLTNEKGGAIDDTVITKVTDDHIYLVVNAGCREKDLAHIEEHMKAFKAKGGDVSWHIHDERSLL 184
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_FLAPR (Aminomethyltransferase, mitochondrial OS=Flaveria pringlei GN=GDCST PE=2 SV=1) HSP 1 Score: 330.872 bits (847), Expect = 3.686e-90 Identity = 162/185 (87.57%), Postives = 174/185 (94.05%), Query Frame = 3 Query: 111 MRGGSLWQLGQSITRRLALADKKTIARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLL 665 MRGG LWQLGQSITRRL +DKKTIARR +AS+A+ LKKT L+DFHVANGGKMVPFAGWSMPIQYKDSIMEST+NCR+NGSLFDVSHMCGLSLKGKDCVPFLEKLV+ADVAGL PGTG+LTVFTNE GG+IDDSVITKV DDHIYLVVNAGCRDKDLAHIE HMK+F AKGGDVSWHI+DERSLL Sbjct: 1 MRGG-LWQLGQSITRRLGQSDKKTIARRCYASEAD-LKKTVLYDFHVANGGKMVPFAGWSMPIQYKDSIMESTINCRENGSLFDVSHMCGLSLKGKDCVPFLEKLVVADVAGLRPGTGSLTVFTNEKGGAIDDSVITKVTDDHIYLVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWHIYDERSLL 183
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SOLTU (Aminomethyltransferase, mitochondrial OS=Solanum tuberosum GN=GDCST PE=2 SV=1) HSP 1 Score: 329.717 bits (844), Expect = 8.212e-90 Identity = 162/185 (87.57%), Postives = 173/185 (93.51%), Query Frame = 3 Query: 111 MRGGSLWQLGQSITRRLALADKKTIARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLL 665 MRGG LWQLGQSITRRLA ADKKTI RR FASDA+ LKKT L+DFHV NGGKMVPFAGWSMPIQYKDSIM+ST+NCR+NGSLFDVSHMCGLSLKGKD +PFLEKLVIADVAGLAPGTG+LTVFTNE GG+IDDSV+TKV +DHIYLVVNAGCRDKDLAHIE HMKSF +KGGDVSWHIHDERSLL Sbjct: 1 MRGG-LWQLGQSITRRLAQADKKTIGRRCFASDAD-LKKTVLYDFHVVNGGKMVPFAGWSMPIQYKDSIMDSTVNCRENGSLFDVSHMCGLSLKGKDTIPFLEKLVIADVAGLAPGTGSLTVFTNEKGGAIDDSVVTKVTNDHIYLVVNAGCRDKDLAHIEEHMKSFKSKGGDVSWHIHDERSLL 183
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_FLATR (Aminomethyltransferase, mitochondrial OS=Flaveria trinervia GN=GDCST PE=3 SV=1) HSP 1 Score: 329.717 bits (844), Expect = 8.212e-90 Identity = 161/185 (87.03%), Postives = 173/185 (93.51%), Query Frame = 3 Query: 111 MRGGSLWQLGQSITRRLALADKKTIARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLL 665 MRGG LWQ+GQSITRRL +DKKTI RR +AS+A+ LKKT L+DFHVANGGKMVPFAGWSMPIQYKDSIMEST+NCR+NGSLFDVSHMCGLSLKGKDCV FLEKLV+ADVAGLAPGTG+LTVFTNE GG+IDDSVITKV DDHIYLVVNAGCRDKDLAHIE HMK+F AKGGDVSWHIHDERSLL Sbjct: 1 MRGG-LWQVGQSITRRLGQSDKKTIVRRWYASEAD-LKKTVLYDFHVANGGKMVPFAGWSMPIQYKDSIMESTINCRENGSLFDVSHMCGLSLKGKDCVAFLEKLVVADVAGLAPGTGSLTVFTNEKGGAIDDSVITKVTDDHIYLVVNAGCRDKDLAHIEQHMKAFKAKGGDVSWHIHDERSLL 183
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_FLAAN (Aminomethyltransferase, mitochondrial OS=Flaveria anomala GN=GDCST PE=3 SV=1) HSP 1 Score: 325.094 bits (832), Expect = 2.023e-88 Identity = 159/185 (85.95%), Postives = 173/185 (93.51%), Query Frame = 3 Query: 111 MRGGSLWQLGQSITRRLALADKKTIARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLL 665 MRGG LWQLGQSITRRL +DKKTI RR +AS+A+ LKKT L+DFHVA+GGKMVPFAGWSMPIQYKDSIM+ST+NCR+NGSLFDVSHMCGLSLKGKDCV FLEKLV+ADVAGLAPGTG+LTVFTNE GG+IDDSVITKV DDHIYLVVNAGCRDKDLAHIE HMK+F AKGGDVSWHI+DERSLL Sbjct: 1 MRGG-LWQLGQSITRRLGQSDKKTIVRRCYASEAD-LKKTVLYDFHVAHGGKMVPFAGWSMPIQYKDSIMDSTINCRENGSLFDVSHMCGLSLKGKDCVAFLEKLVVADVAGLAPGTGSLTVFTNEKGGAIDDSVITKVTDDHIYLVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWHIYDERSLL 183
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_PEA (Aminomethyltransferase, mitochondrial OS=Pisum sativum GN=GDCST PE=1 SV=2) HSP 1 Score: 316.235 bits (809), Expect = 9.396e-86 Identity = 160/186 (86.02%), Postives = 170/186 (91.40%), Query Frame = 3 Query: 111 MRGGSLWQLGQSITRRLALA-DKKTIARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLL 665 MRGG LWQLGQSITRRLA DKK +ARR FA+++E LKKT L+DFHVA+GGKMVPFAGWSMPIQYKDSIM+STLNCRQNGSLFDVSHMCGLSLKGKD V FLEKLVIADVA LA GTGTLTVFTNE GG+IDDSVITKV DDH+YLVVNAGCRDKDLAHIE HMK+F AKGGDVSWHIHDERSLL Sbjct: 1 MRGG-LWQLGQSITRRLANGGDKKAVARRCFATESE-LKKTVLYDFHVAHGGKMVPFAGWSMPIQYKDSIMDSTLNCRQNGSLFDVSHMCGLSLKGKDVVSFLEKLVIADVAALAHGTGTLTVFTNEKGGAIDDSVITKVTDDHLYLVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWHIHDERSLL 184
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_CHICK (Aminomethyltransferase, mitochondrial OS=Gallus gallus GN=AMT PE=2 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 3.499e-40 Identity = 80/162 (49.38%), Postives = 106/162 (65.43%), Query Frame = 3 Query: 174 KKTIARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERS 659 + +ARRH +S E LK+T L H A GG+MVPFAGWS+P+QY +ES L+ R++ SLFDVSHM + G+D V FLE LV+ D+A L PG GTLT+ TNE G +DD ++T +DH+Y+V NAGC DKD A +E A GGDV + +R+ Sbjct: 7 RAALARRHLSSAPEGLKQTPLDALHRARGGRMVPFAGWSLPVQYGRGHLESHLHTRRHCSLFDVSHMLQTRVYGRDRVRFLESLVVGDIAELRPGQGTLTLLTNERGDIVDDLIVTNTAEDHLYVVSNAGCADKDRAVMEGRAAELRAAGGDVHLEVSGQRA 168
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_MOUSE (Aminomethyltransferase, mitochondrial OS=Mus musculus GN=Amt PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 9.527e-38 Identity = 74/154 (48.05%), Postives = 108/154 (70.13%), Query Frame = 3 Query: 183 IARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHI 644 + R +S + L++T L+DFH+A+GGKMV FAGWS+P+QY+DS ++S L+ R++ SLFDVSHM + G D V LE +V+ D+A L P GTL++FTNE GG +DD +++ + H+Y+V NAGCRDKDLA ++ +K F +G DV + Sbjct: 21 VQSRPLSSVQDVLRRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHVDSHLHTRRHCSLFDVSHMLQTKIFGCDRVKLLESVVVGDIAELRPNQGTLSLFTNEAGGILDDLIVSNTSEGHLYVVSNAGCRDKDLALMQDKVKEFQNRGLDVGLEV 174
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_BOVIN (Aminomethyltransferase, mitochondrial OS=Bos taurus GN=AMT PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.772e-37 Identity = 73/148 (49.32%), Postives = 102/148 (68.92%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSL 662 L +T L+DFH+A+GGKMV FAGWS+P+QY+DS + S L+ RQ+ SLFDVSHM + G D V +E LV+ D+A L P GTL++FTNE GG +DD ++T + H+Y+V NAGCR+KDL ++ ++ KG DV+ + D L Sbjct: 27 LHRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHVNSHLHTRQHCSLFDVSHMLQTKIFGCDRVKLMESLVVGDIAELKPNQGTLSLFTNEAGGILDDLIVTSASEGHLYVVSNAGCREKDLTLMQDKVRELQNKGSDVALEVMDNALL 174 The following BLAST results are available for this feature:
BLAST of FC875475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 328
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875475 ID=FC875475; Name=FC875475; organism=Citrus clementina; type=EST; length=665bpback to top |