FC875476
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875476 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.241e-33 Identity = 76/183 (41.53%), Postives = 109/183 (59.56%), Query Frame = 2 Query: 167 NDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHAC-KFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVVLVGYGS 706 + LP DWREKG + VKDQGSCGSCW+FS A+E N + TG L+SLSEQ+LVDCD S + GC+GGLM+ AFE+ +K GG+ EEDYPY +R C ++ K+ + ++ V ++ ++ V + P+++A+ A Q Y G+ C +DHGVV+ GYG+ Sbjct: 16 DSLPESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDR--------SYNEGCDGGLMDYAFEFVIKNGGIDTEEDYPY--KERNGVCDQYRKNAKVVKIDSYEDVPVNNEKALQKAVAHQPVSIALEAGGRDFQHYKSGIFTGK-CGTAVDHGVVIAGYGT 187
BLAST of FC875476 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.621e-33 Identity = 87/224 (38.84%), Postives = 122/224 (54.46%), Query Frame = 2 Query: 53 GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINAVYMQ--TYIGGVSCPYICSRRLDHGVVLVGYGS 706 G+ D+T E + L LR+P + +N LP DWREKG V VK QGSCG+CW+FS GALE L TGKLVSLS Q LVD C E+ G + GCNGG M +AF+Y + G+ E YPY + C++D K AA+ + ++ + ED + + GP++VAI+A + Y GV C++ ++HGV++VGYG+ Sbjct: 76 GMNHLGDMTGEEV----ISLMGSLRVPSQWQRNVTYRSNSNQKLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVD----CSTEKYG--NKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAMN--GKCRYDSKKRAATCSKYTELPFGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSCTQNVNHGVLVVGYGN 287
BLAST of FC875476 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.118e-33 Identity = 82/227 (36.12%), Postives = 129/227 (56.83%), Query Frame = 2 Query: 38 PSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSK--IAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGV--SCPYICSRRLDHGVVLVGYG 703 P+AT+ + +FSDL+ +E + GL R+ + P + P FDWRE+ V +K+QG+CG+CW+F+T ++E + +L+ LSEQQL+DCD S D GCNGGL+++AFE ++ GG+ E DYP+ G R C D+ + + + V + V ++E+++ L GP+ +AI+A + Y GV SC + L+H V+LVGYG Sbjct: 98 PTATYKINKFSDLSKSELIAKFTGLSIPERVSNFCKTIILNQPPDKGPLHFDWREQNKVTSIKNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCD---------SVDMGCNGGLLHTAFEEIMRMGGVQTELDYPFVG--RNRRCGLDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPIPMAIDAADIVNYYRGVISSCE---NNGLNHAVLLVGYG 310
BLAST of FC875476 vs. ExPASy Swiss-Prot
Match: CATV_NPVHC (Viral cathepsin OS=Hyphantria cunea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.766e-33 Identity = 82/236 (34.75%), Postives = 130/236 (55.08%), Query Frame = 2 Query: 2 NLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVVLVGYG 703 NL + + D +A + + +FSDL+ E Y GL L+ + + P + P +FDWR V VK+QG CG+CW+F+T +LE + +L++LSEQQL+DCD+ D+GCNGGL+++A+E ++ GG+ E DYPY G+D C+ D +K V + +++ E+++ L GP+ VAI+A + Y G+ Y + +H V+LVGYG Sbjct: 55 NLEEIIIKNQNDTTAQYEINKFSDLSKDETISKYTGLALPLQTQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGICGACWAFATLASLESQFAIKHNQLINLSEQQLIDCDY---------VDAGCNGGLLHTAYEAVMQMGGVQAENDYPYEGSDGN--CRVDVAKFVVKVKKCYRYIAVFEEKLKDLLRIVGPIPVAIDASDIVNYRRGI-MRYCSNYGFNHAVLLVGYG 278
BLAST of FC875476 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.766e-33 Identity = 83/223 (37.22%), Postives = 118/223 (52.91%), Query Frame = 2 Query: 53 GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKN-GPLAVAINAVYMQ--TYIGGVSCPYICSRRLDHGVVLVGYG 703 G+ D+T E + L LR+P + +N LP DWREKG V VK QGSCG+CW+FS GALE L TGKLVSLS Q LVDC + + GCNGG M AF+Y + G+ E YPY TD+ C++D AA+ + ++ + + + V N GP+ V ++A + Y GV C+++++HGV+++GYG Sbjct: 76 GMNHLGDMTSEEV----MSLMSSLRVPNQWQRNITYKSNPNQMLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSEKYG-------NKGCNGGFMTEAFQYIIDNKGIDSEASYPYKATDQ--KCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPACTQKVNHGVLVIGYG 285
BLAST of FC875476 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.612e-33 Identity = 86/221 (38.91%), Postives = 117/221 (52.94%), Query Frame = 2 Query: 53 GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINAVYMQ--TYIGGVSCPYICSRRLDHGVVLVGYGS 706 G+ D+T E LR + PK LP DWREKG V VK QGSCG+CW+FS GALEG L TGKL+SLS Q LVDC +E E+ G + GC GG M AF+Y + GG+ + YPY TD C ++ AA+ + + + DED + + GP++V I+A + Y GV C+ ++HGV++VGYG+ Sbjct: 84 GMNDMGDMTNEEISCRMGALRISRQSPKTVTFRSY-SNRTLPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNE---EKYG--NKGCGGGYMTEAFQYIIDNGGIEADASYPYKATD--EKCHYNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTGNVNHGVLVVGYGT 296
BLAST of FC875476 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.161e-33 Identity = 89/243 (36.63%), Postives = 129/243 (53.09%), Query Frame = 2 Query: 2 NLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAP---ILPTNDLPADFDWREKG-AVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINAVY-MQTYIGGVSCPYICSR---RLDHGVVLVGYG 703 N R+ + + + G+ QFSD++ AE + YL P++ + T P+ DWR+KG V PVK+QG+CGSCW+FSTTGALE A +A+GK+++L+EQQLVDC + + GC GGL + AFEY L G+M E+ YPY G + CKF+ K A V N ++L DE + + P++ A Y GV C + +++H V+ VGYG Sbjct: 59 NWRKIQAHNQRNHTFKMGLNQFSDMSFAEIKHKYLWSE-----PQNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFN-------NHGCQGGLPSQAFEYILYNKGIMGEDSYPYIG--KNGQCKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYG 287
BLAST of FC875476 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.793e-32 Identity = 97/241 (40.25%), Postives = 125/241 (51.87%), Query Frame = 2 Query: 2 NLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASV---ANFSVVSLDEDQIAANLVKNGPLAVAINAVY-MQTYIGGVSCPYICS---RRLDHGVVLVGYG 703 NL+ + S G+ +F+DLT EFR+ LG + + L LP DWR+ G V PVK QG CGSCW+FSTTGALE A A GK +SLSEQQLVDC + + GCNGGL + AFEY GGL EE YPYTG + CKF ++ I V N ++ + E + A LV+ P++VA V + Y GV C ++H V+ VGYG Sbjct: 84 NLKMIRSHNRKGLSYKLGINEFTDLTWDEFRKHKLGASQNCSATTKGNLK--LTNVVLPETKDWRKDGIVSPVKAQGKCGSCWTFSTTGALEAAYAQAFGKGISLSEQQLVDCAGAFN-------NFGCNGGLPSQAFEYIKFNGGLDTEEAYPYTG--KNGICKFSQANIGVKVISSVNITLGAEYELKYAVALVR--PVSVAFEVVKGFKQYKSGVYASTECGDTPMDVNHAVLAVGYG 311
BLAST of FC875476 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.793e-32 Identity = 93/244 (38.11%), Postives = 131/244 (53.69%), Query Frame = 2 Query: 2 NLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAP---ILPTNDLPADFDWREKGA-VGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVA--INAVYMQTYIGGVSCPYICSR---RLDHGVVLVGYG 703 NLR + + G+ QFSD++ E +R YL P++ + T P DWR+KG V PVK+QGSCGSCW+FSTTGALE A +ATGKL L+EQQLVDC + + GC GGL + AFEY G+M E+ YPY G D CK+ SK A V + + ++L DE+ + + + P++ A + A +M Y G+ C + +++H V+ VGYG Sbjct: 61 NLREINAHNARNHTFKMGLNQFSDMSFDELKRKYLWSE-----PQNCSATKSNYLRGTGPYPPSMDWRKKGNFVTPVKNQGSCGSCWTFSTTGALESAVAIATGKLPFLAEQQLVDCAQNFN-------NHGCQGGLPSQAFEYIRYNKGIMGEDTYPYRGQDGD--CKYQPSKAIAFVKDVANITLNDEEAMVEAVALHNPVSFAFEVTADFMM-YRKGIYSSTSCHKTPDKVNHAVLAVGYG 289
BLAST of FC875476 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.994e-32 Identity = 87/225 (38.67%), Postives = 121/225 (53.78%), Query Frame = 2 Query: 53 GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINAVYMQT---YIGGVSCPYICSRRLDHGVVLVGYGS 706 G+ D+TP E +G LR+P+ +++ L ++ LP DWREKG V VK QGSCGSCW+FS GALEG L TGKLVSLS Q LVDC E E+ G + GC GG M AF+Y + + E YPY D C +D AA+ + + + DE+ + + GP++V I+ + Y GV C+ ++HGV++VGYG+ Sbjct: 74 GMNHMGDMTPEEV----IGYMGSLRIPRPWNRSGTLKSSSNQTLPDSVDWREKGCVTNVKYQGSCGSCWAFSAEGALEGQLKLKTGKLVSLSAQNLVDCSTE---EKYG--NKGCGGGFMTEAFQYIIDT-SIDSEASYPYKAMD--EKCLYDPKNRAATCSRYIELPFGDEEALKEAVATKGPVSVGIDDASHSSFFLYQSGVYDDPSCTENMNHGVLVVGYGT 286 The following BLAST results are available for this feature:
BLAST of FC875476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 163
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875476 ID=FC875476; Name=FC875476; organism=Citrus clementina; type=EST; length=711bpback to top |