FC876162

Overview
NameFC876162
Unique NameFC876162
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length361
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10311 contig Ccv1_Contig10311:2..362. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_ECOLC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=metE PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.762e-20
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:   49 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 348
            +H +G+PR+G +RELK A ES+W G S+ E+L  V  +LR+  W Q  +AGI  +P   F++YD VL T+ +LG VPPR+    G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLTVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPPRHQNKDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_ECOL6 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O6 GN=metE PE=3 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 6.762e-20
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:   49 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 348
            +H +G+PR+G +RELK A ES+W G S+ E+L  V  +LR+  W Q  +AGI  +P   F++YD VL T+ +LG VPPR+    G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPPRHQNKDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_ECOHS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O9:H4 (strain HS) GN=metE PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.762e-20
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:   49 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 348
            +H +G+PR+G +RELK A ES+W G S+ E+L  V  +LR+  W Q  +AGI  +P   F++YD VL T+ +LG VPPR+    G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLTVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPPRHQNKDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_ECO8A (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O8 (strain IAI1) GN=metE PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.762e-20
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:   49 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 348
            +H +G+PR+G +RELK A ES+W G S+ E+L  V  +LR+  W Q  +AGI  +P   F++YD VL T+ +LG VPPR+    G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLTVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPPRHQNKDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_ECO24 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=metE PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.762e-20
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:   49 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 348
            +H +G+PR+G +RELK A ES+W G S+ E+L  V  +LR+  W Q  +AGI  +P   F++YD VL T+ +LG VPPR+    G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLTVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPPRHQNKDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_BORPD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=metE PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.831e-20
Identity = 40/101 (39.60%), Postives = 70/101 (69.31%), Query Frame = 1 
Query:   49 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGE-IGFDVYFSMARGNA 348
            +H +G+PR+G +RELK A+E++W GK +A DL++   +LR++ W++ + +G++++P   F++YD +L+ T +LGAVP R+    G+ +  D  F M RG A
Sbjct:    4 THNLGFPRIGAQRELKRAVEAYWSGKKTAADLEETGRELRAAHWQRQAASGLQWVPVGDFAWYDHILEWTTLLGAVPARFGQPEGQPVSLDTLFRMGRGRA 104
[Close]
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_PROMH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Proteus mirabilis (strain HI4320) GN=metE PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.153e-19
Identity = 43/100 (43.00%), Postives = 64/100 (64.00%), Query Frame = 1 
Query:   49 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 348
            +H +G+PR+G  RELK A ES+W G  S  +L  V  +LR+  W+Q + AG++ +P   F++YDQVL T+ +LG +PPR+    G +  D  F +ARG A
Sbjct:    5 NHTLGFPRIGLNRELKKAQESYWAGNISQAELLAVGKELRARHWQQQANAGVELLPVGDFAWYDQVLGTSLLLGNIPPRHRNEDGRLDLDTLFRVARGRA 104
[Close]
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_ENT38 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Enterobacter sp. (strain 638) GN=metE PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.153e-19
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:   49 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 348
            +H +G+PR+G +RELK A ES+W G+S+ EDL  V  +LR+  W Q  +AGI  +P   F++YD VL T+ +LG VP R+    G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGQSTREDLLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNKDGSVDIDTLFRLGRGRA 104
[Close]
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_ECOUT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli (strain UTI89 / UPEC) GN=metE PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.153e-19
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:   49 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 348
            +H +G+PR+G +RELK A ES+W G S+ E+L  V  +LR+  W Q  +AGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPQRHQNNDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_ECOK1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O1:K1 / APEC GN=metE PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.153e-19
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:   49 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 348
            +H +G+PR+G +RELK A ES+W G S+ E+L  V  +LR+  W Q  +AGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPQRHQNNDGSVDIDTLFRIGRGRA 104
The following BLAST results are available for this feature:
BLAST of FC876162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 266
Match NameE-valueIdentityDescription
METE_ECOLC6.762e-2044.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOL66.762e-2044.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOHS6.762e-2044.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO8A6.762e-2044.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO246.762e-2044.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORPD8.831e-2039.605-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PROMH1.153e-1943.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ENT381.153e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOUT1.153e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOK11.153e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC32001A06EF DevOvary1 Citrus clementina cDNA clone C32001A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876162 ID=FC876162; Name=FC876162; organism=Citrus clementina; type=EST; length=361bp
CTCGACTCTCAATTTCTCTGCTCTTCTTTCTCTGTTTGTAAAATGGCATC
TCACATCGTTGGATACCCACGCATGGGCCCCAAGAGGGAGCTCAAGTTCG
CGTTGGAATCCTTCTGGGATGGCAAGAGCAGCGCCGAGGATTTGCAAAAG
GTGTCCGCTGATCTCAGATCCTCCATCTGGAAACAGATGTCCGAGGCCGG
GATCAAATACATTCCCAGCAACACTTTCTCCTACTACGACCAAGTGCTCG
ACACCACCGCAATGCTCGGTGCCGTGCCACCTAGGTATAACTGGAACGGC
GGCGAGATTGGATTCGATGTTTACTTCTCCATGGCCAGAGGAAACGCCTC
TGTTCCCGCTA
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