FC876162

Overview
NameFC876162
Unique NameFC876162
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length361
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10311 contig Ccv1_Contig10311:2..362. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_ECO7I (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=metE PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.153e-19
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:   49 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 348
            +H +G+PR+G +RELK A ES+W G S+ E+L  V  +LR+  W Q  +AGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_ECO45 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=metE PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.153e-19
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:   49 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 348
            +H +G+PR+G +RELK A ES+W G S+ E+L  V  +LR+  W Q  +AGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPQRHQNNDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_YERPS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pseudotuberculosis GN=metE PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.506e-19
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:   49 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 348
            +H +G+PR+G KRELK A ES+W G S+ E+L  V  +LR+  W+Q  +AG+  +P   F++YD VL T+ +LG VP R+    G I  D  F + RG A
Sbjct:    5 NHTLGFPRVGLKRELKKAQESYWAGNSTQEELLNVGRELRARHWQQQQQAGVDLVPVGDFAWYDHVLTTSLLLGNVPERHQNADGSIDIDTLFRIGRGRA 104
[Close]
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_YERPP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis (strain Pestoides F) GN=metE PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.506e-19
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:   49 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 348
            +H +G+PR+G KRELK A ES+W G S+ E+L  V  +LR+  W+Q  +AG+  +P   F++YD VL T+ +LG VP R+    G I  D  F + RG A
Sbjct:    5 NHTLGFPRVGLKRELKKAQESYWAGNSTQEELLNVGRELRARHWQQQQQAGVDLVPVGDFAWYDHVLTTSLLLGNVPERHQNADGSIDIDTLFRIGRGRA 104
[Close]
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_YERPN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=metE PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.506e-19
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:   49 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 348
            +H +G+PR+G KRELK A ES+W G S+ E+L  V  +LR+  W+Q  +AG+  +P   F++YD VL T+ +LG VP R+    G I  D  F + RG A
Sbjct:    5 NHTLGFPRVGLKRELKKAQESYWAGNSTQEELLNVGRELRARHWQQQQQAGVDLVPVGDFAWYDHVLTTSLLLGNVPERHQNADGSIDIDTLFRIGRGRA 104
[Close]
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_YERPE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis GN=metE PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.506e-19
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:   49 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 348
            +H +G+PR+G KRELK A ES+W G S+ E+L  V  +LR+  W+Q  +AG+  +P   F++YD VL T+ +LG VP R+    G I  D  F + RG A
Sbjct:    5 NHTLGFPRVGLKRELKKAQESYWAGNSTQEELLNVGRELRARHWQQQQQAGVDLVPVGDFAWYDHVLTTSLLLGNVPERHQNADGSIDIDTLFRIGRGRA 104
[Close]
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_YERPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=metE PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.506e-19
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:   49 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 348
            +H +G+PR+G KRELK A ES+W G S+ E+L  V  +LR+  W+Q  +AG+  +P   F++YD VL T+ +LG VP R+    G I  D  F + RG A
Sbjct:    5 NHTLGFPRVGLKRELKKAQESYWAGNSTQEELLNVGRELRARHWQQQQQAGVDLVPVGDFAWYDHVLTTSLLLGNVPERHQNADGSIDIDTLFRIGRGRA 104
[Close]
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_YERP3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=metE PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.506e-19
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:   49 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 348
            +H +G+PR+G KRELK A ES+W G S+ E+L  V  +LR+  W+Q  +AG+  +P   F++YD VL T+ +LG VP R+    G I  D  F + RG A
Sbjct:    5 NHTLGFPRVGLKRELKKAQESYWAGNSTQEELLNVGRELRARHWQQQQQAGVDLVPVGDFAWYDHVLTTSLLLGNVPERHQNADGSIDIDTLFRIGRGRA 104
[Close]
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_YERE8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=metE PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.506e-19
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:   49 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 348
            +H +G+PR+G KRELK A ES+W G S+ E+L  V  +LR+  W+Q  +AG+  +P   F++YD VL T+ +LG VP R+    G I  D  F + RG A
Sbjct:    5 NHTLGFPRVGLKRELKKAQESYWAGNSTQEELLNVGRELRARHWQQQQQAGVDLVPVGDFAWYDHVLTTSLLLGNVPERHQNADGSIDLDTLFRIGRGRA 104
[Close]
BLAST of FC876162 vs. ExPASy Swiss-Prot
Match: METE_SALAR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=metE PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.506e-19
Identity = 43/100 (43.00%), Postives = 64/100 (64.00%), Query Frame = 1 
Query:   49 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 348
            +H +G+PR+G +RELK A ES+W G ++ E+L  V  +LR+  W+Q  +AGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 THTLGFPRVGLRRELKKAQESYWAGNATREELLAVGRELRARHWQQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104
The following BLAST results are available for this feature:
BLAST of FC876162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 266
Match NameE-valueIdentityDescription
METE_ECO7I1.153e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO451.153e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPS1.506e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPP1.506e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPN1.506e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPE1.506e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPA1.506e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERP31.506e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERE81.506e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALAR1.506e-1943.005-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC32001A06EF DevOvary1 Citrus clementina cDNA clone C32001A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876162 ID=FC876162; Name=FC876162; organism=Citrus clementina; type=EST; length=361bp
CTCGACTCTCAATTTCTCTGCTCTTCTTTCTCTGTTTGTAAAATGGCATC
TCACATCGTTGGATACCCACGCATGGGCCCCAAGAGGGAGCTCAAGTTCG
CGTTGGAATCCTTCTGGGATGGCAAGAGCAGCGCCGAGGATTTGCAAAAG
GTGTCCGCTGATCTCAGATCCTCCATCTGGAAACAGATGTCCGAGGCCGG
GATCAAATACATTCCCAGCAACACTTTCTCCTACTACGACCAAGTGCTCG
ACACCACCGCAATGCTCGGTGCCGTGCCACCTAGGTATAACTGGAACGGC
GGCGAGATTGGATTCGATGTTTACTTCTCCATGGCCAGAGGAAACGCCTC
TGTTCCCGCTA
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