FC876170
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876170 vs. ExPASy Swiss-Prot
Match: AMYB_THETU (Thermophilic beta-amylase OS=Thermoanaerobacter thermosulfurogenes PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 9.817e-16 Identity = 41/98 (41.84%), Postives = 54/98 (55.10%), Query Frame = 3 Query: 327 VFVMLPLDTLSNSGHLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKGGPLNYNWEGYAELIQMVKKHGLKLQVVMSFHQCGGNVGDSCTIPLPPWV 620 VFVM PL+ +++ A L+ LK+ GV G+ D WWG VE G ++W Y V+ GLK +MS H CGGNVGD+ IP+P WV Sbjct: 40 VFVMGPLEKVTDFN------AFKDQLITLKNNGVYGITTDIWWGYVENAGENQFDWSYYKTYADTVRAAGLKWVPIMSTHACGGNVGDTVNIPIPSWV 131
BLAST of FC876170 vs. ExPASy Swiss-Prot
Match: AMYB_PAEPO (Beta/alpha-amylase OS=Paenibacillus polymyxa PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.282e-15 Identity = 40/96 (41.67%), Postives = 52/96 (54.17%), Query Frame = 3 Query: 333 VMLPLDTLSNSGHLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKGGPLNYNWEGYAELIQMVKKHGLKLQVVMSFHQCGGNVGDSCTIPLPPWV 620 VM PL +++ G K L LK+ GV + D WWG VE G ++W Y VK+ GLK ++S H+CGGNVGD C IPLP W+ Sbjct: 45 VMGPLAKINDWGSFKK------QLQTLKNNGVYAITTDVWWGYVESAGDNQFDWSYYKTYANAVKEAGLKWVPIISTHKCGGNVGDDCNIPLPSWL 134
BLAST of FC876170 vs. ExPASy Swiss-Prot
Match: AMYB_BACFI (Beta-amylase (Fragment) OS=Bacillus firmus PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.282e-15 Identity = 40/96 (41.67%), Postives = 52/96 (54.17%), Query Frame = 3 Query: 333 VMLPLDTLSNSGHLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKGGPLNYNWEGYAELIQMVKKHGLKLQVVMSFHQCGGNVGDSCTIPLPPWV 620 VM PL +++ G K L LK+ GV + D WWG VE G ++W Y VK+ GLK ++S H+CGGNVGD C IPLP W+ Sbjct: 45 VMGPLAKINDWGSFKK------QLQTLKNNGVYAITTDVWWGYVESAGDNQFDWSYYKTYADAVKEAGLKWVPIISTHKCGGNVGDDCNIPLPSWL 134
BLAST of FC876170 vs. ExPASy Swiss-Prot
Match: AMYB_BACCI (Beta-amylase OS=Bacillus circulans PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.085e-14 Identity = 34/73 (46.58%), Postives = 43/73 (58.90%), Query Frame = 3 Query: 402 LMALKSAGVEGVMVDAWWGLVEKGGPLNYNWEGYAELIQMVKKHGLKLQVVMSFHQCGGNVGDSCTIPLPPWV 620 L LK+ GV + D WWG VE G ++W Y VK+ GLK ++S H+CGGNVGD C IPLP W+ Sbjct: 63 LTTLKNNGVYAITTDVWWGYVESAGDNQFDWSYYKTYADTVKQAGLKWVPIISTHRCGGNVGDDCNIPLPSWL 135
BLAST of FC876170 vs. ExPASy Swiss-Prot
Match: AMYB_BACCE (Beta-amylase OS=Bacillus cereus GN=spoII PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.327e-12 Identity = 31/74 (41.89%), Postives = 43/74 (58.11%), Query Frame = 3 Query: 414 KSAGVEGVMVDAWWGLVEKGGPLNYNWEGYAELIQMVKKHGLKLQVVMSFHQCGGNVGDSCTIPLPPWVLEEIS 635 K G + VD WWG +EK G +++ Q VK G+K+ ++S HQCGGNVGD C +P+P WV + S Sbjct: 69 KQNGFYAITVDFWWGDMEKNGDQQFDFSYAQRFAQSVKNAGMKMIPIISTHQCGGNVGDDCNVPIPSWVWNQKS 142 The following BLAST results are available for this feature:
BLAST of FC876170 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876170 ID=FC876170; Name=FC876170; organism=Citrus clementina; type=EST; length=649bpback to top |