FC876173

Overview
NameFC876173
Unique NameFC876173
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10302 contig Ccv1_Contig10302:1..713. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.562e-26
Identity = 59/157 (37.58%), Postives = 91/157 (57.96%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQRLNLCVVNALGRVMLG 626
            PPGP   PI+GNL +L  +PH+ +  L + HGP+M L+LG+             + LK HD +  +RP    +K I+YN++DI F PYG  WR LRK++ + LFS K  + +R++R+EE  +L + L+ A  +  PVNL + L     + + R+  G
Sbjct:   32 PPGPPKLPIIGNLHYLNGLPHKCLLNLWKIHGPVMQLQLGYVPLVVISSNQAAEEVLKTHDLDCCSRPETIASKTISYNFKDIGFAPYGEEWRALRKLAVIELFSLKKFNSFRYIREEENDLLVKKLSEASEKQSPVNLKKALFTLSASIVCRLAFG 188          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.114e-25
Identity = 65/185 (35.14%), Postives = 97/185 (52.43%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVL 710
            PP P   PI+GNL  LG +PH+S+  LA   GPL+ L LG              + LK HD  F++RP  + A+ I Y+  D+ F PYG  WR +RKI  + L S K ++ YR +R+EE+ ++   ++ + +  E VNL++ L L     + RV      FG    G + R ++F  +  EL  L
Sbjct:   32 PPSPPNLPIIGNLHQLGNLPHRSLRSLANELGPLILLHLGHIPTLIVSTAEIAEEILKTHDLIFASRPSTTAARRIFYDCTDVAFSPYGEYWRQVRKICVLELLSIKRVNSYRSIREEEVGLMMERISQSCSTGEAVNLSELLLLLSSGTITRV-----AFGKKYEGEEERKNKFADLATELTTL 211          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.337e-24
Identity = 61/187 (32.62%), Postives = 89/187 (47.59%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL----ASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVL 710
            PP P   P++GNL  LG  PH+S+  L+R +GP+M L  G              + +K  D NFSNRP  S  + + Y+  D+ F PYG  WR +R I  + L S K +  +R VR+EE +++   +     +  T  VNL   L     +   R+ LG +  G  TG  +      K  + E  VL
Sbjct:   28 PPSPPKLPVLGNLHQLGTFPHRSLQSLSRRYGPVMQLHFGSVPVLVASSPEAAREIMKNQDLNFSNRPNLSIPRRLLYDNHDVAFAPYGEYWRQIRSICVLQLLSNKRVQSFRRVREEETSIMVEKIMQLQKTTPTAAVNLTDLLTCLTNDVFCRIALGKKYGGTTTGDGEYHVRSLKKNLAEFYVL 214          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.206e-24
Identity = 58/162 (35.80%), Postives = 90/162 (55.56%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTR--ALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFG 641
            PPGP   PI+GNL  LG  PH+++  L++T+GPLM L+LG                LK +D    +RP  +    I YN +D+VF PY   WR +RK++ V L++ K +  +RH+R+EE+A   R    A++  E VNL+Q++     + + R+  G  + G
Sbjct:   30 PPGPPRLPIIGNLHQLGEKPHRAMVELSKTYGPLMSLKLGSVTTVVATSVETVRDVLKTYDLECCSRPYMTYPARITYNLKDLVFSPYDKYWRQVRKLTVVELYTAKRVQSFRHIREEEVASFVRFNKQAASSEETVNLSQKILKMSGSVICRIGFGINLEG 191          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 8.880e-24
Identity = 60/179 (33.52%), Postives = 96/179 (53.63%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMV 692
            PP P  +PI+GNL  LG +PHQS+  L++ +GP+M L+ G              Q LKIHD N  +RP  +G + ++YNY DIVF P+   W+ LR++    LFS K +   + +R+EE+  L  + + +  +  PVNL+++L    V  + +       FG    G+   +D F  ++
Sbjct:   32 PPSPPGFPIIGNLHQLGELPHQSLWSLSKKYGPVMLLKFGSIPTVVVSSSETAKQALKIHDLNCCSRPSLAGPRALSYNYLDIVFSPFNDYWKELRRMCVQELFSPKQVHLIQPIREEEVKKLMNSFSESAAQKTPVNLSEKLASLTVGVICKA-----AFGVSFQGTVLNSDNFDKLI 205          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.515e-23
Identity = 53/161 (32.92%), Postives = 87/161 (54.04%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGD 644
            PP P   P++GNL  LG   H+S+  L+R +GPLM L LG              + LK HD  F+NRP +  ++ + YN +D+   PYG  WR ++ +  +HL S K +  +R VR+EE+ ++   +  + + P N+++ L     + + RV LG +  G+
Sbjct:   31 PPSPPGLPLIGNLHQLGRHTHRSLCDLSRRYGPLMLLHLGRVPVLIVSSADMAQEILKTHDQAFANRPRSKLSQKLLYNNRDVASAPYGEYWRQMKSVCVIHLLSNKMVRSFRDVREEEITLMMAKIRKSSSLPFNVSKVLECLTNDVICRVALGRKYGGE 191          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.375e-23
Identity = 61/183 (33.33%), Postives = 99/183 (54.10%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELM 704
            PP P   PI+GNL  LG +PHQS+  L++ +GP+M L+LG              Q LKIHD +  +RP  +GA+ ++YNY DI F PY   W+ +RK++   LFS K +   + ++ EE+  L  +++ +  +  P+NL + L    V+ + R    F V  +GT  +  R +      +E++
Sbjct:   32 PPSPPGCPIIGNLHQLGELPHQSLWKLSKKYGPVMLLKLGRVPTVIVSSSETAKQALKIHDLHCCSRPGFAGARELSYNYLDIAFSPYDDYWKEVRKLAVQELFSSKQVHSIQPIKDEEVKKLIDSISESAAQKTPINLNKTLLALTVSVVCRT--AFSVNFEGTVLNSERFNNIVREALEML 212          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 3.375e-23
Identity = 54/142 (38.03%), Postives = 85/142 (59.86%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQR 581
            PP P  +PI+GNL  LG +PHQS+  L++T+GP+M L+LG              Q LKI+D +  +RP  +GAK ++YNY DI F P+   W+ LR+I    LFS K +   + +++EE+  L  +   + ++  PVNL+++
Sbjct:   32 PPSPPGFPIIGNLHQLGELPHQSLWSLSKTYGPVMLLKLGSVPTVVVSSSETAKQVLKINDLHCCSRPSLAGAKELSYNYLDIAFSPFDDYWKELRRICVQELFSAKRVHSIQPIKEEEVRKLIVSATESASQKSPVNLSEK 173          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.518e-23
Identity = 65/185 (35.14%), Postives = 94/185 (50.81%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLA 713
            PPGP   PI+G++PHL G  PH+ +  LA+ +GPLM+L+LG              + +K HD  F++RP +     + Y   DI F PYG  WR +RKI +V L S K +     +R+EE+  L + +AS     VNL+Q ++  +     R   G R             +EF S V E+M LA
Sbjct:   20 PPGPWKLPIIGSIPHLVGSPPHRKLRDLAKKYGPLMHLQLGEVIFIIVSSAEYAKEVMKTHDVTFASRPRSLFTDIVFYGSTDIGFSPYGDYWRQVRKICNVELLSMKRVQSLWPIREEEVKNLIQRIASEEGSVVNLSQAIDSLIFTITSRSAFGKRYM---------EQEEFISCVREVMKLA 195          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.518e-23
Identity = 56/163 (34.36%), Postives = 87/163 (53.37%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGD 644
            PP P   P++GNL  L   PH++++ L+  HGPLM LR G                +K HD  F+NRP    A  I+   +D+VF PYG  WR ++ + ++HL S K +      R+EE+ +L   L  AS  +  VNL++ +   V + +G+V+LG +  G+
Sbjct:   33 PPSPWRLPVIGNLHQLSLHPHRALSSLSARHGPLMLLRFGRVPVLIVSSADVAHDVMKTHDLKFANRPITKSAHKISNGGRDLVFAPYGEYWRNVKSLCTIHLLSNKMVQSSEKRREEEITLLMETLEEASLSSSSVNLSKLITNMVSDIMGKVVLGKKYSGE 195          
The following BLAST results are available for this feature:
BLAST of FC876173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
C71BN_ARATH5.562e-2637.58Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C71A1_PERAE2.114e-2535.14Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C71A6_NEPRA2.337e-2432.62Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C71B1_THLAR5.206e-2435.80Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C71BY_ARATH8.880e-2433.52Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]
C71AP_ARATH1.515e-2332.92Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]
C71BV_ARATH3.375e-2333.33Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
C71B9_ARATH3.375e-2338.03Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
C71DB_LOTJA7.518e-2335.14Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71AG_ARATH7.518e-2334.36Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC32001B09EF DevOvary1 Citrus clementina cDNA clone C32001B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876173 ID=FC876173; Name=FC876173; organism=Citrus clementina; type=EST; length=713bp
GGCGACTACTCGTACCATTTCTACACTTTCTCTGGGAAACGAAACAAAGA
GCAATGTCTACTTTACCACTACTGATACTGTACACATCACTTTTGGCAAT
TGTCATTTCTTTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCT
CCCACCGTCTGCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTC
CCTCACTTGGGCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAAC
CCACGGCCCCCTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGG
CCGCTTCCGCTTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAAC
TTCTCCAACCGCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTA
TCAGGACATCGTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGA
AGATCAGCTCCGTTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGG
CACGTTCGCCAGGAAGAGATGGCGGTGCTCACGCGCGCGTTGGCGAGTGC
AGGAACGGAGCCGGTGAACTTAGCTCAACGGTTGAACTTGTGCGTTGTGA
ATGCCCTAGGGCGGGTGATGCTAGGCTTCAGAGTGTTCGGCGACGGTACC
GGAGGGAGCGACCCGAGGGCTGACGAGTTCAAATCAATGGTTGTGGAGCT
GATGGTGCTGGCG
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