FC876173

Overview
NameFC876173
Unique NameFC876173
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10302 contig Ccv1_Contig10302:1..713. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.187e-22
Identity = 56/160 (35.00%), Postives = 86/160 (53.75%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEP--VNLAQRLNLCVVNALGRVMLGFRV 635
            PPGPK  PI+GNL     +  ++   L+  +GP+++LR GF             + LK HD    +RP   G + I+YN++DI F PYG  WR +RK+S V LFS K L  +R++R+EE  +  + L+   +    VNL + L   V + + R+  G  +
Sbjct:   29 PPGPKKLPIIGNLHQRRELHPRNSRNLSEKYGPIVFLRYGFVPVVVISSKEAAEEVLKTHDLECCSRPETVGTRAISYNFKDIGFAPYGEDWRTMRKLSVVELFSSKKLQSFRYIREEENDLCVKKLSDLASRRSLVNLEKTLFTLVGSIVCRIGFGINL 188          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.857e-22
Identity = 64/188 (34.04%), Postives = 94/188 (50.00%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRP-PNSGAKHIAYNYQDIV--FRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVL 710
            PP PK  PI+G+L  + P+PHQ    L+  HGP+M L LG              +FLK H+ NFSNRP  N   K +AY+ QD +  F P+GP W+ ++K+    L SG+ +D +  VRQ+E       +   G   E V+    L     N + R+ L  +     T  +D +A+E K +V  +  L
Sbjct:   30 PPSPKALPIIGHLHLVSPIPHQDFYKLSTRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPGQNVAVKGLAYDSQDFLFAFAPFGPYWKFMKKLCMSELLSGRMMDQFLPVRQQETKRFISRVFRKGVAGEAVDFGDELMTLSNNIVSRMTLSQK-----TSENDNQAEEMKKLVSNIAEL 212          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.857e-22
Identity = 60/157 (38.22%), Postives = 82/157 (52.23%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFR 632
            PPGP+  P +GNL  LG +PHQS+  L+  HGPLM+L+LG              +  K HDS FS RP    A  + Y    + F PYG  WR +RKI  + L S K +  +  VR EE+ +L + +A     PVNL++       N + R+ LG R
Sbjct:   34 PPGPRKLPFIGNLHQLGTLPHQSLQYLSNKHGPLMFLQLGSIPTLVVSSAEMAREIFKNHDSVFSGRPSLYAANRLGYG-STVSFAPYGEYWREMRKIMILELLSPKRVQSFEAVRFEEVKLLLQTIA-LSHGPVNLSELTLSLTNNIVCRIALGKR 188          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.731e-22
Identity = 52/157 (33.12%), Postives = 84/157 (53.50%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQRLNLCVVNALGRVMLG 626
            PP P  +P++GNL  +G +PH+S+  LA  +GP+M L  GF             + L+ HD +  +RP   G + ++ N++D+ F PYG  W+  RK +   LF  K +  +RH+R+EE   L + L+ +     PV+L++ L     +   RV LG
Sbjct:   31 PPSPPKFPVIGNLHQIGELPHRSLQHLAERYGPVMLLHFGFVPVTVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRNFKDVCFTPYGNEWKARRKFALRELFCLKKVQSFRHIREEECNFLVKQLSESAVNRSPVDLSKSLFWLTASIFFRVALG 187          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.731e-22
Identity = 53/157 (33.76%), Postives = 86/157 (54.78%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQRLNLCVVNALGRVMLG 626
            PP P  +P++GNL  +G +PH+S+  LA  +GP+M L  GF             + L+ HD +  +RP   G + ++ +++DI F PYG  W+  RK +   LF  K +  +RH+R+EE   L + L+ +  +  PV+L++ L     + L RV LG
Sbjct:   31 PPSPPKFPVIGNLHQIGELPHRSLQHLAERYGPVMLLHFGFVPITVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRDFKDIGFTPYGNEWKARRKFALRELFCLKKVQSFRHIREEECNFLVKQLSESAVDRSPVDLSKSLFWLTASILFRVALG 187          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 3.731e-22
Identity = 52/157 (33.12%), Postives = 87/157 (55.41%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQRLNLCVVNALGRVMLG 626
            PP P   PI+GNL HL  +PH+    L+  +GPL++LRLG                LK +D    +RP   G+  ++Y ++DI F PYG  WR +RK++ + LFS K +  +R++R+EE+  + + ++ +  +  PV+L++       + + RV LG
Sbjct:   32 PPSPSSLPIIGNLHHLAGLPHRCFHKLSIKYGPLVFLRLGSVPVVVISSSEAAEAVLKTNDLECCSRPKTVGSGKLSYGFKDITFAPYGEYWREVRKLAVIELFSSKKVQSFRYIREEEVDFVVKKVSESALKQSPVDLSKTFFSLTASIICRVALG 188          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 105.145 bits (261), Expect = 3.731e-22
Identity = 56/169 (33.14%), Postives = 88/169 (52.07%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSD 662
            PP P   P++GNL  LGP PH+ +  L+  +GPLM L  G                +K HD  F+NRP +          +DI+F PYG  W+ ++ +  VHL + K +  + ++R+EE+ V+T  L  AS+ +  VNL++ L     + + R+ LG R + +  GG D
Sbjct:   34 PPSPWRLPVIGNLHQLGPNPHRYLHSLSLRYGPLMLLHFGRVPVLVVSCPDVTNDIMKTHDLKFANRPKSKAINIFMEGGRDIIFGPYGEDWKSMKSLGVVHLLNNKMVRSFENLREEEIKVMTEKLEEASSSSSSVNLSKLLMTLTNDIICRITLG-RKYNEEEGGID 201          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.873e-22
Identity = 56/162 (34.57%), Postives = 86/162 (53.09%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQRLNLCVVNALGRVMLGFRVFG 641
            PPGP   PI+GNL  LG  PH+S+  L+ T+GPLM L+ G              + LK  D    +RP  +    + YN +D+ F PY   WR +RK++ V L++ K +  ++H R+EE+A L   +  A +  +PVNL ++L     + + RV  G  + G
Sbjct:   30 PPGPPRLPIIGNLHQLGSKPHRSMFKLSETYGPLMSLKFGSVSTVVASTPETVKEVLKTFDVECCSRPNMTYPARVTYNLKDLCFSPYSKYWREVRKMTVVELYTAKRVQSFQHTRKEEVAALVDFIKQAASLEKPVNLNKKLMKLSGSVICRVAFGINLQG 191          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 104.76 bits (260), Expect = 4.873e-22
Identity = 57/167 (34.13%), Postives = 86/167 (51.50%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSD 662
            PP P   P++ NL  LG  PH+S+  L+  +GPLM L  G                LK HD  F++RP +     I YN +D+   PYG  WR ++ +  +HLFS K +  +R VRQEE++++   +  + +  +NL++ L     N + RV LG R +G  T   D
Sbjct:   34 PPSPPRLPLIRNLHQLGRHPHRSLCSLSHRYGPLMLLHFGSVPVLVVSSADAAKDVLKTHDRVFASRPRSKIFDKIFYNGRDVALAPYGEYWRQMKSVCVLHLFSNKMVRSFRDVRQEEISLMIEKIRISSSLRINLSEILVNLTNNVICRVALG-RKYGGKTDFKD 199          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.364e-22
Identity = 57/160 (35.62%), Postives = 85/160 (53.12%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAG--TEPVNLAQRLNLCVVNALGRVMLGFRV 635
            PPGP   P +GNL  L  +P ++   L   +GP++ LR GF             + LKIHD    +RP  +G + I+YN++DI F PYG  W+ +RK+S V LF+ K    +R +R+EE  +L + L        PVNL + L   V + + R+  GF +
Sbjct:   29 PPGPPKLPFIGNLHQLQELPPRN---LNHKYGPVILLRFGFVPLVVISSKEAAEEVLKIHDLECCSRPETAGTRKISYNFKDIGFAPYGEEWKAMRKLSVVELFTAKKHQYFRSIREEENDLLVKKLTELALTRSPVNLKKTLFTLVGSIVCRIGFGFNL 185          
The following BLAST results are available for this feature:
BLAST of FC876173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
C71BS_ARATH2.187e-2235.00Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C93A1_SOYBN2.857e-2234.04Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C71A9_SOYBN2.857e-2238.22Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]
C71BK_ARATH3.731e-2233.12Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
C71BJ_ARATH3.731e-2233.76Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
C71B2_ARATH3.731e-2233.12Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C71AR_ARATH3.731e-2233.14Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
C71BC_ARATH4.873e-2234.57Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]
C71AO_ARATH4.873e-2234.13Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C71BT_ARATH6.364e-2235.63Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC32001B09EF DevOvary1 Citrus clementina cDNA clone C32001B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876173 ID=FC876173; Name=FC876173; organism=Citrus clementina; type=EST; length=713bp
GGCGACTACTCGTACCATTTCTACACTTTCTCTGGGAAACGAAACAAAGA
GCAATGTCTACTTTACCACTACTGATACTGTACACATCACTTTTGGCAAT
TGTCATTTCTTTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCT
CCCACCGTCTGCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTC
CCTCACTTGGGCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAAC
CCACGGCCCCCTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGG
CCGCTTCCGCTTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAAC
TTCTCCAACCGCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTA
TCAGGACATCGTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGA
AGATCAGCTCCGTTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGG
CACGTTCGCCAGGAAGAGATGGCGGTGCTCACGCGCGCGTTGGCGAGTGC
AGGAACGGAGCCGGTGAACTTAGCTCAACGGTTGAACTTGTGCGTTGTGA
ATGCCCTAGGGCGGGTGATGCTAGGCTTCAGAGTGTTCGGCGACGGTACC
GGAGGGAGCGACCCGAGGGCTGACGAGTTCAAATCAATGGTTGTGGAGCT
GATGGTGCTGGCG
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