FC876173

Overview
NameFC876173
Unique NameFC876173
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10302 contig Ccv1_Contig10302:1..713. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.364e-22
Identity = 57/180 (31.67%), Postives = 94/180 (52.22%), Query Frame = 3
Query:  165 PGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELM 704
            P P   P++GNL  L   PH+S+  L+  +GPLM L  G                LK HD  F++RP +   + + Y  +++   PYG  WR ++ +S +HL S K +  ++ VRQEE+ ++   +  + ++PVNL++ L+    + + RV LG R +G GT        +FK ++  LM
Sbjct:   31 PSPPRLPLIGNLHQLSQHPHRSLCYLSHRYGPLMLLHFGSVPVIVASTAEAARDVLKTHDRVFASRPRSKIFEKLLYKSRNMASAPYGEYWRQMKSVSVLHLLSNKMVRSFQDVRQEEITLMMETIRKSSSKPVNLSKILSSLTNDVICRVALG-RKYGVGT--------DFKELIDRLM 201          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.312e-22
Identity = 54/160 (33.75%), Postives = 83/160 (51.88%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQRLNLCVVNALGRVMLGFRV 635
            PPGPK  PI+GNL +L  +PH     L++  GP+M L  GF             + LK  D    +RP     + I+YN++DI F PYG  W+ LRK+  + L + K    +R++R+EE  +L + L  +  +  PVNL + L   V + + R+  G  +
Sbjct:   33 PPGPKTLPIIGNLHNLTGLPHTCFRNLSQKFGPVMLLHFGFVPVVVISSKEGAEEALKTQDLECCSRPETVATRMISYNFKDIGFAPYGEEWKALRKLVVMELLNTKKFQSFRYIREEENDLLIKKLTESALKKSPVNLKKTLFTLVASIVCRLAFGVNI 192          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.312e-22
Identity = 53/163 (32.52%), Postives = 86/163 (52.76%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGT 650
            P  P   P++GNL  LG  PH+S+  L+  +GPLM LR G                LK +D  F++RP +   + I Y  +D+   PYG  WR ++ +  +HL + K +  +R+VRQEE++++   +  + +  VNL++ L     + + RV LG R + D T
Sbjct:   33 PASPPRLPLIGNLHQLGRHPHRSLCSLSNRYGPLMLLRFGLVPVLVVSSADVARDILKTYDRVFASRPRSKIFEKIFYEARDVALAPYGEYWRQMKSVCVLHLLTNKMVRSFRNVRQEEISLMMEKIQKSSSLQVNLSELLGSLTNDVISRVALG-RKYSDET 194          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.086e-21
Identity = 50/155 (32.26%), Postives = 85/155 (54.84%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLG 626
            PPGP+ WPI+GN+  +  + H+ +A LA+ +G L +LR+GF             Q L++ DS FSNRP      ++ Y+  D+ F  YGP WR +RK+  + +FS K  + +  VR +E+  + R+++    +P+N+ +++     N   R   G
Sbjct:   41 PPGPRGWPIIGNMLMMDQLTHRGLANLAKKYGGLCHLRMGFLHMYAVSSPEVARQVLQVQDSVFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKVCVMKVFSRKRAESWASVR-DEVDKMVRSVSCNVGKPINVGEQIFALTRNITYRAAFG 194          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.086e-21
Identity = 59/180 (32.78%), Postives = 96/180 (53.33%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL---ASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMV 692
            PP P  +PI+GNL  LG +PHQS+  L++ +G +M L+ G              Q LKIHD +  +RP  +G + ++YNY DI F P+   W+ LR+I    LFS K +  ++ ++++E+  L  ++   AS GT PVNL+++     V    +       FG    G+   +D F+ ++
Sbjct:   32 PPSPPGFPIIGNLHQLGELPHQSLWRLSKKYGHVMLLKFGSIPTVVVSSSETAKQVLKIHDLHCCSRPSLAGPRALSYNYLDIAFSPFDDYWKELRRICVQELFSVKRVQSFQPIKEDEVKKLIDSVSESASQGT-PVNLSEKFTSLTVRVTCKA-----TFGVNFQGTVLNSDRFEKLI 205          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.418e-21
Identity = 60/180 (33.33%), Postives = 90/180 (50.00%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLG---PMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMV 692
            PPGP   PI+GNL  L     +P Q++  L R +GPLM+L+LG              + +K HD +F  RP     + + Y   DI F PYG  WR +RKI ++ L S K +  + H+RQ+E   L +++ S+   P++L+ +L           +LG  V     G  +   DEF S+V
Sbjct:   34 PPGPWRLPIIGNLHQLALAASLPDQALQKLVRKYGPLMHLQLGEISTLVVSSPKMAMEMMKTHDVHFVQRPQLLAPQFMVYGATDIAFAPYGDYWRQIRKICTLELLSAKRVQSFSHIRQDENKKLIQSIHSSAGSPIDLSGKL---------FSLLGTTVSRAAFGKENDDQDEFMSLV 204          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.418e-21
Identity = 50/161 (31.06%), Postives = 86/161 (53.42%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGD 644
            P  P   P++GNL  LG  PH+S+  L+  +GPLM L LG                LK HD  F++RP +   + + Y+ +D+ F PYG  WR ++ +  + L S K +  +R+VRQEE++++   +  + +  VN+++ L     + + R+ LG +  G+
Sbjct:   33 PRSPPRLPLIGNLHQLGHHPHRSLCSLSHRYGPLMLLHLGRVPVLVVSSADVARDILKTHDRVFASRPRSKLFEKLFYDGRDVAFAPYGEYWRQIKSVCVLRLLSNKMVTSFRNVRQEEISLMMEKIQKSSSLQVNVSELLGSLTNDVISRIALGRKYSGE 193          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.852e-21
Identity = 58/170 (34.12%), Postives = 84/170 (49.41%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMA-VLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPR 668
            PP P+  PI+GNL  LG  PH+S+  L++ +GP+M L LG                LK HD  ++ RP  S A  + Y  +D+ F P+G  W  +R I  +HL S K +  YR VR+EE A ++ +         +NL + L     N   RV LG R + +   G D +
Sbjct:   37 PPSPRKLPIIGNLHQLGSHPHRSLRKLSQKYGPVMLLHLGSKPVIVASSVDAARDILKTHDHVWATRPKYSIADSLLYGSKDVGFSPFGEYWWQVRSIVVLHLLSNKRVQSYRDVREEETANMIEKIRQGCDASVINLGEHLCFLTNNITSRVALG-RTYDERESGIDAK 205          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.418e-21
Identity = 54/159 (33.96%), Postives = 83/159 (52.20%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAG----TEPVNLAQRLNLCVVNALGRVMLG 626
            PPGPK  PI+GNL   G   H+S+  +++ +GP+M L  G              + LK HD    +RP   G+    YN++DI F PYG  WR +RKI+   LFS K L  +R++R++E  +L R ++ +     T  VNL + +     + + R+  G
Sbjct:   29 PPGPKGLPIIGNLHQFGRFLHKSLHKISQEYGPVMLLHFGVVPVIIVSSKEGAEEVLKTHDLETCSRPKTVGSGLFTYNFKDIGFAPYGENWREMRKIAVSELFSQKKLKSFRYIREDESQLLVRKVSKSALETPTSSVNLRKVIFTFAASIICRLSFG 187          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.158e-21
Identity = 57/182 (31.32%), Postives = 95/182 (52.20%), Query Frame = 3
Query:  165 PGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELM 704
            P P  +PI+GNL  +G +PHQ++  L++ +GP+M+L LG              Q L++HD +   RP  SG + ++YNY DI F PY   W+ +RK+    LFS K +   + ++ EE+  +  ++A + ++  PVNL  +     V+ + R       FG    G+   +D F  +V E +
Sbjct:   32 PCPPGFPIIGNLHQIGELPHQTLWKLSKKYGPVMHLMLGRVPTVVVSSSDTARQVLRVHDLHCCTRPSLSGPRELSYNYLDIAFSPYDDYWKEVRKLCVQELFSTKQVHSIQPIKDEEVKKMIDSIAESASQKNPVNLNNKCLELTVSVVCRT-----AFGVSFEGTVLNSDRFNKIVREAL 208          
The following BLAST results are available for this feature:
BLAST of FC876173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
C71AN_ARATH6.364e-2231.67Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C71B7_ARATH8.312e-2233.75Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
C71AM_ARATH8.312e-2232.52Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
C84A1_ARATH1.086e-2132.26Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C71BX_ARATH1.086e-2132.78Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]
C71D8_SOYBN1.418e-2133.33Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71AL_ARATH1.418e-2131.06Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
C71A4_SOLME1.852e-2134.12Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C71B5_ARATH2.418e-2133.96Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C71BW_ARATH3.158e-2131.32Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC32001B09EF DevOvary1 Citrus clementina cDNA clone C32001B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876173 ID=FC876173; Name=FC876173; organism=Citrus clementina; type=EST; length=713bp
GGCGACTACTCGTACCATTTCTACACTTTCTCTGGGAAACGAAACAAAGA
GCAATGTCTACTTTACCACTACTGATACTGTACACATCACTTTTGGCAAT
TGTCATTTCTTTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCT
CCCACCGTCTGCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTC
CCTCACTTGGGCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAAC
CCACGGCCCCCTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGG
CCGCTTCCGCTTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAAC
TTCTCCAACCGCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTA
TCAGGACATCGTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGA
AGATCAGCTCCGTTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGG
CACGTTCGCCAGGAAGAGATGGCGGTGCTCACGCGCGCGTTGGCGAGTGC
AGGAACGGAGCCGGTGAACTTAGCTCAACGGTTGAACTTGTGCGTTGTGA
ATGCCCTAGGGCGGGTGATGCTAGGCTTCAGAGTGTTCGGCGACGGTACC
GGAGGGAGCGACCCGAGGGCTGACGAGTTCAAATCAATGGTTGTGGAGCT
GATGGTGCTGGCG
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