FC876173

Overview
NameFC876173
Unique NameFC876173
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10302 contig Ccv1_Contig10302:1..713. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 4.561e-20
Identity = 48/136 (35.29%), Postives = 76/136 (55.88%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVN 569
            PPGP   PI+GNL  LG + ++S   +++ +GP++ LRLG              + LK HD     RP  +      YN++DI F P+G  WR +RKI+++ LFS K L  +R++R+EE  +L + ++ +  E  N
Sbjct:   29 PPGPIGLPIIGNLHQLGKLLYKSFHKISQEYGPVVLLRLGVVPVIVVSSKEGAEEVLKTHDLETCTRPKTAATGLFTYNFKDIGFAPFGDDWREMRKITTLELFSVKKLKSFRYIREEESELLVKKISKSVDETQN 164          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.780e-20
Identity = 56/157 (35.67%), Postives = 83/157 (52.87%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALA-SAGTEP-VNLAQRLNLCVVNALGRVMLG 626
            PPGP   PI+GNL  LG   H+S   L++ +GP+M+LR G              + LK HD     RP  S      YN++DI F  YG  WR +RK++ + LFS K L  +R++R+EE  +L + +  SA T+  V+L + L     + + R+  G
Sbjct:   29 PPGPISLPIIGNLHQLGKSLHRSFYKLSQEYGPVMFLRFGVVPVVVFSTKEAAEEVLKTHDLETCTRPKLSATGLFTYNFKDIGFAQYGEDWREMRKLAMLELFSSKKLKAFRYIREEESELLVKKVTESAQTQTLVDLRKALFSYTASIVCRLAFG 185          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.016e-19
Identity = 52/183 (28.42%), Postives = 94/183 (51.37%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVN------LAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMV 692
            PPGP+PWP++GNL  + P+  +     A  +GP++ +  G              + LK +D   ++RP N   +  + N QD+++  YGP +  +RK+ ++ LF+ K L+  R +R++E+  +  ++  A T P N      +   L++   N + R+  G R F +  G  D +  EFK++V
Sbjct:   32 PPGPRPWPVLGNLRQIKPIRCRCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNGQDLIWADYGPHYIKVRKLCNLELFTPKRLEALRPIREDEVTAMVESVYRAATAPGNEGKPMVVRNHLSMVAFNNITRLAFGKR-FMNANGDIDEQGREFKTIV 213          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.264e-19
Identity = 57/167 (34.13%), Postives = 86/167 (51.50%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQRL-----NLCVVNALGRVMLGFRVF 638
            PPGP   P +G + HL G +PH+ +  LA  +GPLM+L+LG              Q LK HD  F++RP       I YN +DI F PYG  WR +RKI  + + S K++  +  +R +E+  L  ++    T  E VN  +R+     ++   +A G+V+    VF
Sbjct:   32 PPGPWKLPFIGGMHHLAGGLPHRVLRDLAEKYGPLMHLQLGEVSAVVVTSPEMAKQVLKTHDIAFASRPKLLAMDIICYNRRDIAFSPYGDYWRQMRKICIMEVLSAKSVRSFSSIRHDEVVRLIDSIQPCFTSGELVNFTERIIWFTSSMTCRSAFGQVLKEQEVF 198          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.264e-19
Identity = 54/162 (33.33%), Postives = 85/162 (52.47%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQRLNLCVVNALGRVMLGFRVFG 641
            PPGP   PI+GNL  LG  PH+S+  L+  +GPL+YL+LG                LK  D +  +R   +    I+YN +D+ F PY   W+ +RK++ V L++ K +  +R++R+EE+A     +  + +  E VNL Q L     + + RV  G  + G
Sbjct:   30 PPGPPRLPIIGNLHQLGSKPHRSMFKLSEKYGPLVYLKLGKVPSVVASTPETVKDVLKTFDKDCCSRAFLTYPARISYNLKDLAFAPYSKYWKAVRKMTVVELYTAKRVKSFRNIREEEVASFVEFIKHSASLEEIVNLNQTLVKLSGSVICRVGFGINLEG 191          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.956e-19
Identity = 52/161 (32.30%), Postives = 84/161 (52.17%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQRLNLCVVNALGRVMLGFRVF 638
            PPGPK  PI+GNL     +  ++   LA  +GP+  L+ GF             + LKI+D    +RP  +G +   YN++DI   P+G  W ++RK+S V LFS K L  ++++ +EE  +  + L+   T   PVNL + +   V N + R+  G  ++
Sbjct:   29 PPGPKKLPIIGNLHQRRTLHPRNRRNLAEMYGPVALLQYGFVPVVAISSKEAAEEVLKINDLECCSRPEAAGMRATFYNFKDIGMAPFGDEWSLMRKLSVVELFSVKKLQSFKYIIEEENNLCVKKLSEFATRQSPVNLERAIFTLVGNIVCRIGYGINLY 189          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.956e-19
Identity = 52/167 (31.14%), Postives = 81/167 (48.50%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGG 656
            PP P   P++GNL  L   PH+S+  L+  +GPLM L  G              + LK HD  F+NRP +     +    +D+VF PYG  WR ++ +  ++L + K +  +  VR+EE+  +   L  AS  +   NL++       +   RV LG + + D T G
Sbjct:   34 PPSPWRIPVIGNLHQLSLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSSEAAHEILKTHDLKFANRPKSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKVREEEVNAMMEKLEKASCSSSAENLSELFVTLTSDVTSRVSLGKKYWEDETAG 200          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.043e-19
Identity = 49/157 (31.21%), Postives = 82/157 (52.23%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHL--GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLG 626
            PPGP   PI+GN+ +L   P+PH  +  L+  +G LM+L+LG              + +K HD  F++RP    A+ + Y+++ + F PYG  WR LRKI ++ L S K +  ++ +R+E +    + +A+     VN+ + +   V     R  LG
Sbjct:   36 PPGPWKLPIIGNMHNLVGSPLPHHRLRDLSAKYGSLMHLKLGEVSTIVVSSPEYAKEVMKTHDHIFASRPYVLAAEIMDYDFKGVAFTPYGDYWRQLRKIFALELLSSKRVQSFQPIREEVLTSFIKRMATIEGSQVNVTKEVISTVFTITARTALG 192          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.586e-19
Identity = 56/174 (32.18%), Postives = 89/174 (51.15%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADE 677
            PPGP   PIVGNL  L  M H+ +  L++ HGP+M+L+LGF             + LK HD     RP  + A+  + N ++I    Y   WR LRK++    FS K +  +R+VR+EE  ++ + L     +  PV+L++ L     + + R + G + F D    S+ + +E
Sbjct:   33 PPGPAKLPIVGNLHQLQGMVHRCLHELSKKHGPVMHLQLGFVPLVLISSSEAAEEALKTHDIECCTRPNTNAARVFSRNNKNIGLGAYSDEWRELRKVAVREYFSVKKVQSFRYVREEENHLMVKKLRDLALKQSPVDLSKTLFCLAASTVFRPVFG-QSFSDNKHFSEEKIEE 205          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 6.586e-19
Identity = 53/161 (32.92%), Postives = 84/161 (52.17%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQRLNLCVVNALGRVMLGFRVF 638
            PPGP   PI+GNL  L  + H+ +  L++ HGP+M+LRLGF             + LK HD    +RP    ++  + N +DI F  YG  WR LRK+S    FS K +  ++++R+EE  ++ + L    ++  PV+L++ L     + + R   G   F
Sbjct:   33 PPGPAKLPIIGNLHQLQGLLHKCLHDLSKKHGPVMHLRLGFAPMVVISSSEAAEEALKTHDLECCSRPITMASRVFSRNGKDIGFGVYGDEWRELRKLSVREFFSVKKVQSFKYIREEENDLMIKKLKELASKQSPVDLSKILFGLTASIIFRTAFGQSFF 193          
The following BLAST results are available for this feature:
BLAST of FC876173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
C71BZ_ARATH4.561e-2035.29Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71BL_ARATH7.780e-2035.67Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
C98A1_SORBI1.016e-1928.42Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C71D7_SOLCH2.264e-1934.13Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71BD_ARATH2.264e-1933.33Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
C71BF_ARATH2.956e-1932.30Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]
C71AI_ARATH2.956e-1931.14Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C71D9_SOYBN5.043e-1931.21Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C71BP_ARATH6.586e-1932.18Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C71B4_ARATH6.586e-1932.92Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC32001B09EF DevOvary1 Citrus clementina cDNA clone C32001B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876173 ID=FC876173; Name=FC876173; organism=Citrus clementina; type=EST; length=713bp
GGCGACTACTCGTACCATTTCTACACTTTCTCTGGGAAACGAAACAAAGA
GCAATGTCTACTTTACCACTACTGATACTGTACACATCACTTTTGGCAAT
TGTCATTTCTTTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCT
CCCACCGTCTGCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTC
CCTCACTTGGGCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAAC
CCACGGCCCCCTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGG
CCGCTTCCGCTTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAAC
TTCTCCAACCGCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTA
TCAGGACATCGTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGA
AGATCAGCTCCGTTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGG
CACGTTCGCCAGGAAGAGATGGCGGTGCTCACGCGCGCGTTGGCGAGTGC
AGGAACGGAGCCGGTGAACTTAGCTCAACGGTTGAACTTGTGCGTTGTGA
ATGCCCTAGGGCGGGTGATGCTAGGCTTCAGAGTGTTCGGCGACGGTACC
GGAGGGAGCGACCCGAGGGCTGACGAGTTCAAATCAATGGTTGTGGAGCT
GATGGTGCTGGCG
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