FC876173

Overview
NameFC876173
Unique NameFC876173
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10302 contig Ccv1_Contig10302:1..713. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.983e-15
Identity = 56/168 (33.33%), Postives = 76/168 (45.24%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGG 656
            PPGP   P+VG L HL    P  ++  LA  +GP+M+LR G              + L+  D  F++RP    ++   Y   DI F PYG  WRMLRK+ +V L S K +     +R  E   L R +  A+ G +P  LA  L  C      +       FG   GG
Sbjct:   36 PPGPWNLPLVGGLLHLLRSQPQVALRDLAGKYGPVMFLRTGQVDTVVISSPAAAQEVLRDKDVTFASRPSLLVSEIFCYGNLDIGFAPYGAYWRMLRKLCTVELLSTKMVRQLAPIRDGETLALVRNIEAAAGGKKPFTLATLLISCTNTFTAKA-----AFGQACGG 198          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.983e-15
Identity = 55/158 (34.81%), Postives = 82/158 (51.90%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGP-LMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEM-AVLTRA-LASAGTEPVNLAQRLNLCVVNALGRVMLG 626
            P  P   PI+G+L  +G +P+ S+A LA  +GP LM LRLG                L+ +D  FS+RP +  +  I Y   D  F PYG  +R  RK+ +VHL +   +   R  R+EE+   L R   A+A  EPV++++ L+  V N + R + G
Sbjct:   69 PSPPMKLPIIGHLHLMGDIPYVSLAALATRYGPDLMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSRPRSLVSDIIMYGATDSCFAPYGDHFRKARKLVTVHLLNASKVRSQRPAREEEVRGALDRVRRAAAAREPVDMSELLHSFVNNLVCRAVSG 226          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.590e-15
Identity = 44/156 (28.21%), Postives = 84/156 (53.85%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVF-RPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAQRLNLCVVNALGRVM 620
            PPGP   PI+GN+  +G  PH S A L++T+GP+M L+ G              + L+ +D   S+R P +  + I ++   +V+  P   RWR+LRK+S+  LFS + ++  + +R+ ++  L   +  +S   E V++++   +  +N +  ++
Sbjct:   39 PPGPPRLPIIGNIHLVGRNPHHSFADLSKTYGPIMSLKFGSLNTVVVTSPEAAREVLRTYDQILSSRTPTNSIRSINHDKVSVVWLPPSSSRWRLLRKLSATQLFSPQRIEATKTLRENKVKELVSFMSESSEREEAVDISRATFITALNIISNIL 194          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.418e-15
Identity = 55/189 (29.10%), Postives = 90/189 (47.62%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQ-FLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEE-MAVLTRALASAGTE-------PVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVEL 701
            PPGP   P VG+L  + P  H+ +   +  +GP+  LR G              + F   +D   S+RP    AK++AYN+  +   PYG  WR LR+I S  + S   L +++H+R++E + +LTR      T         + L   L+    N + R++ G R +GD     +  A+ FK +V ++
Sbjct:   29 PPGPPSRPFVGHLHLMKPPIHRLLQRYSNQYGPIFSLRFGSRRVVVITSPSLAQESFTGQNDIVLSSRPLQLTAKYVAYNHTTVGTAPYGDHWRNLRRICSQEILSSHRLINFQHIRKDEILRMLTRLSRYTQTSNESNDFTHIELEPLLSDLTFNNIVRMVTGKRYYGDDVNNKE-EAELFKKLVYDI 216          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.769e-15
Identity = 46/159 (28.93%), Postives = 74/159 (46.54%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT----EPVNLAQRLNLCVVNALGRVMLG 626
            PP P   P++GNL  L    H+S+  L+  +GPLM L  G                LK +D   +NRP       I    +D+ F PYG  W+ ++ I   +L S K +  Y+ +R++E+ ++   + +A +     PVNL+Q       + + R  LG
Sbjct:   34 PPSPWRLPVIGNLHQLSLNTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDILKTYDVICANRPKTKVIDKILRGGRDVAFAPYGEYWKQMKSICIQNLLSNKMVRSYKKIREDEIKLMIEKVENASSCSPPSPVNLSQLFMTLTNDIICRAALG 192          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.535e-15
Identity = 52/188 (27.66%), Postives = 90/188 (47.87%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVF-RPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSD-PRADEFKSMVVELMVLA 713
            PPGP   PI+GN+  +G  PH S A LA+ +GP+M L+ G              + L+ HD   S R  N   +   +    +++  P   RWRMLRK+S   +FS +  +  + +R +++  L   +  +S   E V++++     V+N +  ++     F    G  D  +++EF+  V+  M  A
Sbjct:   39 PPGPPRLPIIGNIHQVGKNPHSSFADLAKIYGPIMSLKFGCLNSVVITSPEAAREVLRTHDQILSGRKSNDSIRCFGHEEVSVIWLPPSSARWRMLRKLSVTLMFSPQRTEATKALRMKKVQELVSFMNESSERKEAVDISRASYTTVLNIISNIL-----FSVDLGSYDSKKSNEFQDTVIGAMEAA 221          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.535e-15
Identity = 56/187 (29.95%), Postives = 89/187 (47.59%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQ---EEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLA 713
            PPGP   P+VGN+  LG  PH+S+A  ++T+GP+M L+LG              + L+ HD   S R  N   +   ++   IV+ P   RWR L+K  + +L S + LD  + +R    EE+  L       G E ++LA+   +   N +   +    +    T  S+  + EF + VV L  +A
Sbjct:   39 PPGPPILPLVGNIFQLGFNPHRSLAAFSKTYGPIMSLKLGRLTAVVISSPEAAKEALRTHDHVMSARTFNDALRAFDHHKHSIVWIPPSARWRFLKKTITKYLLSPQNLDAIQSLRMRKVEELVSLVNEFRERG-EAIDLARASFVTSFNIISNALFSVDL---ATYDSNSSSYEFHNTVVHLTDIA 221          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.535e-15
Identity = 48/159 (30.19%), Postives = 85/159 (53.46%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVL---TRALASAGTEPVNLAQRLNLCVVNALGRVMLG 626
            PPGP   P++G+L  L G +P  ++A +A+ +GP+ +++LG              + +K+ D   ++R  + G K + Y+  DI+F PY   WR +RKI    L S + +  +  +RQ+E++ L    R+ A+AG E V+L +R+     + + R   G
Sbjct:   36 PPGPPKLPLIGHLHLLWGKLPQHALASVAKQYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACADRFESIGTKIMWYDNDDIIFSPYSVHWRQMRKICVSELLSARNVRSFGFIRQDEVSRLLGHLRSSAAAG-EAVDLTERIATLTCSIICRAAFG 193          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.192e-14
Identity = 46/158 (29.11%), Postives = 79/158 (50.00%), Query Frame = 3
Query:  162 PPGPK-PWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQRLNLCVVNALGRVMLG 626
            PP P    PI+G++  LGP+ HQS   L+  +GPL  L  G              Q L+ ++  F+ R  ++  K + Y    + F PYG  WR ++K+S   L   +++++++H+R +E   L R L++     E VN+ + L     N +  +M+G
Sbjct:   33 PPSPFFRLPIIGHMHMLGPLLHQSFHNLSHRYGPLFSLNFGSVLCVVASTPHFAKQLLQTNELAFNCRIESTAVKKLTYE-SSLAFAPYGDYWRFIKKLSMNELLGSRSINNFQHLRAQETHQLLRLLSNRARAFEAVNITEELLKLTNNVISIMMVG 189          
BLAST of FC876173 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.740e-14
Identity = 43/156 (27.56%), Postives = 81/156 (51.92%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRP-YGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAG--TEPVNLAQRLNLCVVNALGRVM 620
            PPGP   PI+GN+  +G  PH+S A L++T+GP+M L+LG              + L+ HD   S R P +  + I +    +V+ P    RWR+LR++S   L S + ++  + +R  ++  L   ++ +    E V++++   +  +N +  ++
Sbjct:   39 PPGPPRLPIIGNIHLVGKHPHRSFAELSKTYGPVMSLKLGSLNTVVIASPEAAREVLRTHDQILSARSPTNAVRSINHQDASLVWLPSSSARWRLLRRLSVTQLLSPQRIEATKALRMNKVKELVSFISESSDREESVDISRVAFITTLNIISNIL 194          
The following BLAST results are available for this feature:
BLAST of FC876173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
C99A3_ORYSJ1.983e-1533.33Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C71C4_MAIZE1.983e-1534.81Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C76C2_ARATH2.590e-1528.21Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C81F1_ARATH4.418e-1529.10Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
C71AJ_ARATH5.769e-1528.93Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
C76C4_ARATH7.535e-1527.66Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C76C3_ARATH7.535e-1529.95Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C71DD_MENPI7.535e-1530.19Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
C93B1_GLYEC2.192e-1429.11Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C76C1_ARATH3.740e-1427.56Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC32001B09EF DevOvary1 Citrus clementina cDNA clone C32001B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876173 ID=FC876173; Name=FC876173; organism=Citrus clementina; type=EST; length=713bp
GGCGACTACTCGTACCATTTCTACACTTTCTCTGGGAAACGAAACAAAGA
GCAATGTCTACTTTACCACTACTGATACTGTACACATCACTTTTGGCAAT
TGTCATTTCTTTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCT
CCCACCGTCTGCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTC
CCTCACTTGGGCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAAC
CCACGGCCCCCTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGG
CCGCTTCCGCTTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAAC
TTCTCCAACCGCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTA
TCAGGACATCGTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGA
AGATCAGCTCCGTTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGG
CACGTTCGCCAGGAAGAGATGGCGGTGCTCACGCGCGCGTTGGCGAGTGC
AGGAACGGAGCCGGTGAACTTAGCTCAACGGTTGAACTTGTGCGTTGTGA
ATGCCCTAGGGCGGGTGATGCTAGGCTTCAGAGTGTTCGGCGACGGTACC
GGAGGGAGCGACCCGAGGGCTGACGAGTTCAAATCAATGGTTGTGGAGCT
GATGGTGCTGGCG
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