FC876174
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EF1A_THEON (Elongation factor 1-alpha OS=Thermococcus onnurineus (strain NA1) GN=tuf PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.470e-50 Identity = 104/208 (50.00%), Postives = 140/208 (67.31%), Query Frame = 3 Query: 84 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707 M KEK H+NIV IGHVD GKSTT G L++ I + +I++FE E+ E K SFK+AWV+D+LK ERERGITID+A KFET Y T+IDAPGHRDF+KNMITG SQAD AVL++ +T G QT+EHA LA TLG+ +I NKMD Y + ++ ++ ++V L +GY + P +P S +EGDN++++S + Sbjct: 1 MAKEKPHVNIVFIGHVDHGKSTTIGRLLFDTANIPENIIKKFE-EMGEKGK-SFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIGHIIVAINKMDMV--DYDEKKFKQVSEQVKKLLMMLGY--KDFPIIPISAWEGDNVVKKSDKM 195
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EF1A_THECE (Elongation factor 1-alpha OS=Thermococcus celer GN=tuf PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.225e-50 Identity = 104/208 (50.00%), Postives = 138/208 (66.35%), Query Frame = 3 Query: 84 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707 M KEK HINIV IGHVD GKSTT G L++ I + +I++FE E+ E K SFK+AWV+D+LK ERERGITID+A KFET Y T+IDAPGHRDF+KNMITG SQAD AVL++ T G QT+EHA LA TLG+ ++ NKMD Y + ++ + ++V L +GY + P +P S +EGDN++++S + Sbjct: 1 MAKEKPHINIVFIGHVDHGKSTTIGRLLFDTANIPENIIKKFE-EMGEKGK-SFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAVTDGVMP-------QTKEHAFLARTLGINNILVAVNKMDMV--NYDEKKFKAVAEQVKKLLMMLGY--KNFPIIPISAWEGDNVVKKSDKM 195
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EF1A_METVS (Elongation factor 1-alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=tuf PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.226e-49 Identity = 103/208 (49.52%), Postives = 135/208 (64.90%), Query Frame = 3 Query: 84 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLI--IDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEV-SSYLKKVGYNPEKVPFVPTSGFEGDNMIERS 698 M K K +N+ IGHVD+GKSTT G L+ G ID ++I R KE E K F++A+V+D LK ERERG+TID+A KF T KY T++D PGHRDFIKNMITG SQAD AVL+ +D G + QTREH L TLGV+Q+ NKMD T +S+A Y+E+ K + LK +G+NPE++ FVP + GDN+ ++S Sbjct: 1 MAKTKPILNVAFIGHVDAGKSTTVGRLLLDGGAIDPQLIVRLRKEAEEKGKAGFEFAYVMDGLKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAVLVVNVDDAKSGIQP------QTREHVFLIRTLGVRQLAVAVNKMD--TVNFSEADYNELKKMIGDQLLKMIGFNPEQINFVPVASLHGDNVFKKS 200
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EF1A_METVA (Elongation factor 1-alpha OS=Methanococcus vannielii GN=tuf PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.226e-49 Identity = 103/208 (49.52%), Postives = 135/208 (64.90%), Query Frame = 3 Query: 84 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLI--IDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEV-SSYLKKVGYNPEKVPFVPTSGFEGDNMIERS 698 M K K +N+ IGHVD+GKSTT G L+ G ID ++I R KE E K F++A+V+D LK ERERG+TID+A KF T KY T++D PGHRDFIKNMITG SQAD AVL+ +D G + QTREH L TLGV+Q+ NKMD T +S+A Y+E+ K + LK +G+NPE++ FVP + GDN+ ++S Sbjct: 1 MAKTKPILNVAFIGHVDAGKSTTVGRLLLDGGAIDPQLIVRLRKEAEEKGKAGFEFAYVMDGLKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAVLVVNVDDAKSGIQP------QTREHVFLIRTLGVRQLAVAVNKMD--TVNFSEADYNELKKMIGDQLLKMIGFNPEQINFVPVASLHGDNVFKKS 200
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EF1A_METMP (Elongation factor 1-alpha OS=Methanococcus maripaludis GN=tuf PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.226e-49 Identity = 103/210 (49.05%), Postives = 136/210 (64.76%), Query Frame = 3 Query: 84 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLI--IDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEV-SSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTN 704 M KEK +N+ IGHVD+GKSTT G L+ G ID ++I R KE E K F++A+V+D LK ERERG+TID+A KF T KY T++D PGHRDFIKNMITG SQAD AVL+ +D G + QTREH L+ TLG+ Q+ NKMD T +S+A Y+E+ K + LK VG+NP+ + F+P + GDN+ ++S N Sbjct: 1 MAKEKPILNVAFIGHVDAGKSTTVGRLLLDGGAIDPQLIVRLRKEAEEKGKAGFEFAYVMDGLKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAVLVVNVDDAKSGIQP------QTREHVFLSRTLGITQLAVAINKMD--TVNFSEADYNEMKKMLGDQLLKMVGFNPDNIDFIPVASLLGDNVFKKSEN 202
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EF1A_METM5 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=tuf PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.226e-49 Identity = 102/208 (49.04%), Postives = 136/208 (65.38%), Query Frame = 3 Query: 84 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLI--IDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEV-SSYLKKVGYNPEKVPFVPTSGFEGDNMIERS 698 M KEK +N+ IGHVD+GKSTT G L+ G ID ++I R +KE E K F++A+V+D LK ERERG+TID+A KF T KY T++D PGHRDFIKNMITG SQAD A+L+ +D G + QTREH L+ TLG+ Q+ NKMD T +S+A Y+E+ K + LK VG+NP+ + FVP + GDN+ ++S Sbjct: 1 MAKEKPILNVAFIGHVDAGKSTTVGRLLLDGGAIDPQLIVRLKKEAEEKGKAGFEFAYVMDGLKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAILVVNVDDAKSGIQP------QTREHVFLSRTLGISQLAVAINKMD--TVNFSEADYNEMKKMLGDQLLKMVGFNPDNITFVPVASLHGDNVFKKS 200
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EF1A_METM7 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=tuf PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.601e-49 Identity = 102/208 (49.04%), Postives = 135/208 (64.90%), Query Frame = 3 Query: 84 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLI--IDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEV-SSYLKKVGYNPEKVPFVPTSGFEGDNMIERS 698 M KEK +N+ IGHVD+GKSTT G L+ G ID ++I R KE E K F++A+V+D LK ERERG+TID+A KF T KY T++D PGHRDFIKNMITG SQAD A+L+ +D G + QTREH L+ TLG+ Q+ NKMD T +S+A Y+E+ K + LK VG+NP+ + FVP + GDN+ ++S Sbjct: 1 MAKEKPILNVAFIGHVDAGKSTTVGRLLLDGGAIDPQLIVRLRKEAEEKGKAGFEFAYVMDGLKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAILVVNVDDAKSGIQP------QTREHVFLSRTLGISQLAVAINKMD--TVNFSEADYNEMKKMLGDQLLKMVGFNPDNITFVPVASLHGDNVFKKS 200
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EF1A_METM6 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=tuf PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.566e-49 Identity = 102/208 (49.04%), Postives = 134/208 (64.42%), Query Frame = 3 Query: 84 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLI--IDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEV-SSYLKKVGYNPEKVPFVPTSGFEGDNMIERS 698 M KEK +N+ IGHVD+GKSTT G L+ G ID ++I R KE E K F++A+V+D LK ERERG+TID+A KF T KY T++D PGHRDFIKNMITG SQAD A+L+ +D G + QTREH L+ TLG+ Q+ NKMD T +S+A Y+E+ K + LK VG+NP + FVP + GDN+ ++S Sbjct: 1 MAKEKPILNVAFIGHVDAGKSTTVGRLLLDGGAIDPQLIVRLRKEAEEKGKAGFEFAYVMDGLKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAILVVNVDDAKSGIQP------QTREHVFLSRTLGISQLAVAINKMD--TVNFSEADYNEMKKMLGDQLLKMVGFNPANITFVPVASLHGDNVFKKS 200
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EF1A_METKA (Elongation factor 1-alpha OS=Methanopyrus kandleri GN=tuf PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.566e-49 Identity = 98/207 (47.34%), Postives = 134/207 (64.73%), Query Frame = 3 Query: 84 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTN 704 M KEK HIN+ IGHVD GKST G L+Y G I+ + ++ + K+ ++D L+ ERERG+TID+A KFET Y T++D PGHRDF+KNMITG SQAD A+L++ + G QT+EHA LA TLG+ Q+I NKMD Y + RY+E+ +EV+ LK +GYN +++PF+P S FEGDN++E+S N Sbjct: 1 MAKEKEHINLAFIGHVDHGKSTLVGRLLYDTGVIEDK----------DLGEGEDKFRVIMDTLEEERERGVTIDLAHTKFETDNYEFTIVDCPGHRDFVKNMITGASQADAAILVVAADDGVMP-------QTKEHAFLAKTLGIDQLIVAINKMDLV--DYDENRYEEVKQEVAELLKTIGYNVDEIPFIPISAFEGDNVVEKSDN 188
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: ERF3_ZYGRO (Eukaryotic peptide chain release factor GTP-binding subunit OS=Zygosaccharomyces rouxii GN=SUP35 PE=3 SV=2) HSP 1 Score: 193.741 bits (491), Expect = 7.945e-49 Identity = 91/195 (46.67%), Postives = 133/195 (68.21%), Query Frame = 3 Query: 96 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYN-PEKVPFVPTSGFEG 677 K H++I+ +GHVD+GKST G+++Y G +DKR +E++E+E + K+ + +WV+D + ER+ G TI++ FET K T++DAPGH+ ++ MI G SQAD +L+I + G +E G K GQTREHALLA T GV ++I NKMD T +SK RYD+ VK +S++LK +GYN E+V F+P SG+ G Sbjct: 235 KDHMSIIFMGHVDAGKSTMGGNILYMTGSVDKRTVEKYEREAKDAGKQGWYLSWVMDTNREERDDGKTIEVGRAYFETEKRRYTILDAPGHKMYVSEMIGGASQADVGILVISARKGEYETGFEKGGQTREHALLAKTQGVNKLIVTINKMDDPTVNWSKERYDQCVKNLSNFLKAIGYNVKEEVVFMPVSGYSG 429 The following BLAST results are available for this feature:
BLAST of FC876174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876174 ID=FC876174; Name=FC876174; organism=Citrus clementina; type=EST; length=707bpback to top |