FC876174
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_ANAVT (Elongation factor Tu OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=tuf PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.412e-21 Identity = 64/204 (31.37%), Postives = 106/204 (51.96%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERS 698 + K H+NI IGHVD GK+T T + L + + V + +++ +D E+ RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV +++ NK D A E+V+ E+ L + ++ + +P V SG + +++ ++ Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAITMTLAALGQAVAKGYDQ---------------IDNAPEEKARGITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLAKQVGVPKLVVFLNKED----MMEDAELLELVELELRELLTEYEFDGDDIPIVRGSGLQALDVMTKN 185
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU3_STRRA (Elongation factor Tu-3 OS=Streptomyces ramocissimus GN=tuf3 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.412e-21 Identity = 70/204 (34.31%), Postives = 100/204 (49.02%), Query Frame = 3 Query: 78 TAMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSG---FEGD 680 TA + K H+NI +GHVD GK+T T + K +AE +F +D+ E RGITI+IA ++ET + +D PGH D++KNM+TG +Q D A+L++ + G QT EH LLA +GV ++ NK DA + + D + EV L + GY + P V SG EGD Sbjct: 4 TAYVRTKPHLNIGTMGHVDHGKTTLTAAIT---------------KVLAERGSGTFVPFDRIDRAPEEAARGITINIAHVEYETDTRHYAHVDMPGHADYVKNMVTGAAQLDGAILVVSALDGIMP-------QTAEHVLLARQVGVDHIVVALNKADAGDEELT----DLVELEVRDLLSEHGYGGDGAPVVRVSGLKALEGD 181
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_METEP (Sulfate adenylyltransferase subunit 1 OS=Methylobacterium extorquens (strain PA1) GN=cysN PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.412e-21 Identity = 67/209 (32.06%), Postives = 107/209 (51.20%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMI 689 + K + + G VD GKST G L++ I F+ +V + + S K+ A ++D L+AERE+GITID+A F T + V D PGH + +NM TG S AD AV+++D+ G Q+R HALL LG++++ NKMD +S+ +++ IV ++ + + +V +P S GDN++ Sbjct: 20 QNKEVLRFITCGSVDDGKSTLIGRLLHDTKQI-------FDDQVTALQRDSRKHGTQGGEVDLALLVDGLQAEREQGITIDVAYRFFSTDRRSFIVADTPGHEQYTRNMATGASTADLAVILVDARHG-------LTRQSRRHALLVSLLGIRRVALAINKMDLV--GWSQDKFEAIVSGFQAFAAPLNFT--EVRAIPLSAKNGDNVV 210
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_THEAQ (Elongation factor Tu OS=Thermus aquaticus GN=tuf PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.844e-21 Identity = 66/189 (34.92%), Postives = 95/189 (50.26%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 656 + K H+N+ IGHVD GK+T T L Y + V EV + +DK ER RGITI+ A ++ET K + + +D PGH D+IKNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D D + EV L + + ++VP + Sbjct: 8 RTKPHVNVGTIGHVDHGKTTLTAALTYVAAAENPNV------EVKDYGD--------IDKAPEERARGITINTAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFMNKVDMVD---DPELLDLVEMEVRDLLNQYEFPGDEVPVI 172
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_STRU0 (Elongation factor Tu OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=tuf PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.844e-21 Identity = 70/204 (34.31%), Postives = 102/204 (50.00%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTS---GFEGDNMIE 692 + K H+NI IGHVD GK+T T + L + + + YA + D ERERGITI+ A ++ET + IDAPGH D++KNMITG +Q D A+L++ ST G QTREH LL+ +GVK +I NK+D + + + E+ L + + + +P + S EGD+ E Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLA-----------RRLPTSVNQPKDYASI-DAAPEERERGITINTAHVEYETETRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKIDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDSKYE 189
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_STRPZ (Elongation factor Tu OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=tuf PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.844e-21 Identity = 70/204 (34.31%), Postives = 102/204 (50.00%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTS---GFEGDNMIE 692 + K H+NI IGHVD GK+T T + L + + + YA + D ERERGITI+ A ++ET + IDAPGH D++KNMITG +Q D A+L++ ST G QTREH LL+ +GVK +I NK+D + + + E+ L + + + +P + S EGD+ E Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLA-----------RRLPTSVNQPKDYASI-DAAPEERERGITINTAHVEYETETRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDSKYE 189
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_STRP8 (Elongation factor Tu OS=Streptococcus pyogenes serotype M18 GN=tuf PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.844e-21 Identity = 70/204 (34.31%), Postives = 102/204 (50.00%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTS---GFEGDNMIE 692 + K H+NI IGHVD GK+T T + L + + + YA + D ERERGITI+ A ++ET + IDAPGH D++KNMITG +Q D A+L++ ST G QTREH LL+ +GVK +I NK+D + + + E+ L + + + +P + S EGD+ E Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLA-----------RRLPTSVNQPKDYASI-DAAPEERERGITINTAHVEYETETRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDSKYE 189
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_RHOE4 (Elongation factor Tu OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=tuf PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.844e-21 Identity = 75/204 (36.76%), Postives = 107/204 (52.45%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK----EVSSYLKKVGYNPEKVPFVPTS---GFEGD 680 + K H+NI IGHVD GK+TTT I K + + F ++N+ S +DK E+ RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D DEI++ EV L ++ E+ P +P S EGD Sbjct: 8 RTKPHVNIGTIGHVDHGKTTTTA-------AITKVLADAFP----DLNEASAFDQ--IDKAPEEKARGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADMVDD-------DEILELVEMEVRELLAAQEFD-EEAPVIPISALKALEGD 183
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_OENOB (Elongation factor Tu OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=tuf PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.844e-21 Identity = 70/195 (35.90%), Postives = 98/195 (50.26%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFE 674 + K H+NI IGHVD GK+T T + L EK +A+ YA + D ERERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D D + EV L + + + +P + S + Sbjct: 9 RTKPHVNIGTIGHVDHGKTTLTAAITKVLS----------EKGLAQAQD----YASI-DAAPEERERGITINTAHVEYETDKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVNYIVVFLNKTDLVD---DPELIDLVEMEVRELLSEYDFPGDDIPIIRGSALK 178
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_MYCPE (Elongation factor Tu OS=Mycoplasma penetrans GN=tuf PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.844e-21 Identity = 70/204 (34.31%), Postives = 103/204 (50.49%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPTS---GFEGD 680 + K H+NI IGH+D GK+T T + + K GG ++ KY + DK E+ RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L++ ++ G QTREH LLA +GV +M+ NK D S A ++V+ EV L G++ + P + S EGD Sbjct: 8 RSKAHVNIGTIGHIDHGKTTLTAAICTYLAKKGGA-----------------KAMKYDEI-DKAPEEKARGITINTAHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAASDGPMP-------QTREHILLARQVGVPKMVVFLNKCDMV----SDAEMQDLVEMEVRELLSSYGFDGDNTPVIRGSALKALEGD 182 The following BLAST results are available for this feature:
BLAST of FC876174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876174 ID=FC876174; Name=FC876174; organism=Citrus clementina; type=EST; length=707bpback to top |