FC876176
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876176 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.066e-13 Identity = 50/163 (30.67%), Postives = 80/163 (49.08%), Query Frame = 2 Query: 212 DDGSVMLKLAQSLQNLPSD------WSSTSSTGYCEWTGINCDNSN--RVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIP 673 +D +L++ +SL P + W+S + YC WTG+ CDN+ RV ++L GL+G++SP L L NN+ G IP +L+N TSL+ ++L +N T L N++ L + DN + P L +L L + + + G IP Sbjct: 25 NDLQTLLEVKKSLVTNPQEDDPLRQWNS-DNINYCSWTGVTCDNTGLFRVIALNLTGLGLTGSISPWFGRFDNLIHLDLSSNNLVGPIPTALSNLTSLESLFLFSNQLTGEIPSQLGSLVNIRSLRIGDNELVG--DIPETLGNLVNLQMLALASCRLTGPIP 184
BLAST of FC876176 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.290e-13 Identity = 48/142 (33.80%), Postives = 65/142 (45.77%), Query Frame = 2 Query: 254 NLPSDWSSTSSTGYCEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPS-LANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPD 676 N+ W T C W + C+N N V + L + LSG L P++ L L+ L NNI G +PS L N T+L + L N+FT L L+ L L N N P P LT +L L + N + G +PD Sbjct: 48 NVLQSWDPTL-VNPCTWFHVTCNNENSVIRVDLGNADLSGQLVPQLGQLKNLQYLELYSNNITGPVPSDLGNLTNLVSLDLYLNSFTGPIPDSLGKLFKLRFLRL--NNNSLTGPIPMSLTNIMTLQVLDLSNNRLSGSVPD 186
BLAST of FC876176 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.910e-13 Identity = 45/163 (27.61%), Postives = 87/163 (53.37%), Query Frame = 2 Query: 212 DDGSVMLKLAQSLQ---NLPSDWSSTSSTGYCEWTGINCDN-SNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDVFY 685 ++G+ +L++ +S + N+ DW+++ S+ YC W G++C+N + V ++L+ L G +SP I L L ++ + N ++G IP + + +SLQ++ L N + L L+ L L +N + P P+ L++ +L L + + G IP + Y Sbjct: 25 EEGATLLEIKKSFKDVNNVLYDWTTSPSSDYCVWRGVSCENVTFNVVALNLSDLNLDGEISPAIGDLKSLLSIDLRGNRLSGQIPDEIGDCSSLQNLDLSFNELSGDIPFSISKLKQLEQLILKNNQLIG--PIPSTLSQIPNLKILDLAQNKLSGEIPRLIY 185
BLAST of FC876176 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.539e-12 Identity = 49/142 (34.51%), Postives = 66/142 (46.48%), Query Frame = 2 Query: 254 NLPSDWSSTSSTGYCEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPS-LANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPD 676 N+ W T C W + C+N N V + L + LSG L PE+ L L+ L NNI G IPS L N T+L + L N+F+ L+ L+ L L N N P LT T+L L + N + G +PD Sbjct: 45 NVLQSWDPTL-VNPCTWFHVTCNNENSVIRVDLGNAELSGHLVPELGVLKNLQYLELYSNNITGPIPSNLGNLTNLVSLDLYLNSFSGPIPESLGKLSKLRFLRL--NNNSLTGSIPMSLTNITTLQVLDLSNNRLSGSVPD 183
BLAST of FC876176 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12 Identity = 48/151 (31.79%), Postives = 76/151 (50.33%), Query Frame = 2 Query: 248 LQNLPSD----WSSTSSTGYCEWTGINCD-NSNRVTTISLAKSGLSGTL-SPEISSLTQLETLSFQMNNIAGAIPS-LANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDV 679 LQ +P + W+ + S C W G+ C+ N + + ++ L +GL G + S + LT+L LS + N ++G IPS +N T L+ +YL +N F+ F L NL L +S N PF + T LT L++ N G +P + Sbjct: 36 LQQIPHENRLQWNESDSA--CNWVGVECNSNQSSIHSLRLPGTGLVGQIPSGSLGRLTELRVLSLRSNRLSGQIPSDFSNLTHLRSLYLQHNEFSGEFPTSFTQLNNLIRLDISSNNFTGSIPF--SVNNLTHLTGLFLGNNGFSGNLPSI 182
BLAST of FC876176 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.429e-12 Identity = 52/161 (32.30%), Postives = 76/161 (47.20%), Query Frame = 2 Query: 227 MLKLAQSLQN--LPSDWSSTSSTGYCEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAI-PSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDVFYSFFNL 700 ++ +SL+N L S W+ +SS +C+W G+ C RV ++SL L G + EISSL L L N +G I P + N LQ + L N+ T + L L L LSDN P P+ +L++L + N ++ G IP NL Sbjct: 30 LISFKRSLENPSLLSSWNVSSSASHCDWVGVTC-LLGRVNSLSLPSLSLRGQIPKEISSLKNLRELCLAGNQFSGKIPPEIWNLKHLQTLDLSGNSLTGLLPRLLSELPQLLYLDLSDNHFSGSLP-PSFFISLPALSSLDVSNNSLSGEIPPEIGKLSNL 188
BLAST of FC876176 vs. ExPASy Swiss-Prot
Match: Y4372_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g37250 OS=Arabidopsis thaliana GN=At4g37250 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.479e-12 Identity = 49/157 (31.21%), Postives = 76/157 (48.41%), Query Frame = 2 Query: 215 DGSVMLKLAQSLQNLPSDWSSTSSTGY---CEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIP 673 DG V++K S+ P T + + C W GI+C+N ++V T+SL S L G++ ++ SL L++L N+ G +P S NA L+ + L +N + L NL L+LSD N P L +LT + ++N G IP Sbjct: 25 DGLVLMKFKSSVLVDPLSLLQTWNYKHESPCSWRGISCNNDSKVLTLSLPNSQLLGSIPSDLGSLLTLQSLDLSNNSFNGPLPVSFFNARELRFLDLSSNMISGEIPSAIGDLHNLLTLNLSD--NALAGKLPTNLASLRNLTVVSLENNYFSGEIP 179
BLAST of FC876176 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.479e-12 Identity = 49/163 (30.06%), Postives = 80/163 (49.08%), Query Frame = 2 Query: 215 DGSVMLKLAQSLQNLPSDWSSTSSTGYCEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAI-PSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDVFYSFFNL 700 DG +L L + +L S W T C W GI C NRV ++S+ + L+ + P++SSL+ L+ L+ N++G I PS T L+ + L +N+ + L+ LQ L L N N P++++ +L L + + + G IP F S +L Sbjct: 30 DGQALLSLKRPSPSLFSSWDPQDQTP-CSWYGITCSADNRVISVSIPDTFLNLSSIPDLSSLSSLQFLNLSSTNLSGPIPPSFGKLTHLRLLDLSSNSLSGPIPSELGRLSTLQFLIL--NANKLSGSIPSQISNLFALQVLCLQDNLLNGSIPSSFGSLVSL 189
BLAST of FC876176 vs. ExPASy Swiss-Prot
Match: RLK90_ARATH (Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana GN=RLK902 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.479e-12 Identity = 51/161 (31.68%), Postives = 79/161 (49.07%), Query Frame = 2 Query: 215 DGSVMLKLAQSLQNLPSDWSSTSSTGYCEWTGINCDNSNRVTTISLAKSGLSGTLSPEI-SSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKS----TSLTTLYMDNANIFGLIPDV 679 D S +L ++ W T C WTG+ CD RVT + L LSG + I +LTQL TLS ++N + G++P L + + L+ +YL N F+ L+NL L+L++N F E++ T L TLY++N + G + D+ Sbjct: 34 DKSALLSFRSAVGGRTLLWD-VKQTSPCNWTGVLCDGG-RVTALRLPGETLSGHIPEGIFGNLTQLRTLSLRLNGLTGSLPLDLGSCSDLRRLYLQGNRFSGEIPEVLFSLSNLVRLNLAEN------EFSGEISSGFKNLTRLKTLYLENNKLSGSLLDL 186
BLAST of FC876176 vs. ExPASy Swiss-Prot
Match: RLK_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RLK OS=Arabidopsis thaliana GN=RLK PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.639e-12 Identity = 49/160 (30.63%), Postives = 75/160 (46.88%), Query Frame = 2 Query: 215 DGSVMLKLAQSL----QNLPSDWSSTSSTGYCEWTGINCDNSNRVTTISLAKSGLSGTLSPE-ISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNF-TSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPD 676 D +LK +SL +N + W++ S C W+G+ C N V + + LSG++ E +S LT L TLSF N G P +L+ +YL NN F +P F+G+ L+ + L+ N P+ + K L L +D G IP+ Sbjct: 34 DSEAILKFKESLVVGQENALASWNAKSPP--CTWSGVLC-NGGSVWRLQMENLELSGSIDIEALSGLTSLRTLSFMNNKFEGPFPDFKKLAALKSLYLSNNQFGGDIPGDAFEGMGWLKKVHLAQNKFTG--QIPSSVAKLPKLLELRLDGNQFTGEIPE 188 The following BLAST results are available for this feature:
BLAST of FC876176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876176 ID=FC876176; Name=FC876176; organism=Citrus clementina; type=EST; length=700bpback to top |