FC876181

Overview
NameFC876181
Unique NameFC876181
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length722
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10305 contig Ccv1_Contig10305:1..722. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1_CRYNE (Small COPII coat GTPase SAR1 OS=Cryptococcus neoformans GN=SAR1 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.483e-47
Identity = 99/181 (54.70%), Postives = 121/181 (66.85%), Query Frame = 3
Query:  180 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLXNFTTGKGEVNLAELNVRPLEVFMCSIVRKMGY 722
            MF+++WF+ VLASLGL  K AK+LFLGLDNAGKTTLLHMLK++RL   QPT +PTSEEL+IG +KF  +DLGGH  ARR+W                   ERFAESK              VPFL+LGNKID   A SEE+LR+ LGL   TTGKG++ L +  +RP+EVFMCS+V + GY
Sbjct:    1 MFIINWFWDVLASLGLMNKSAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGNVKFTTYDLGGHIQARRLWRDYFPEVDGIVFLVDSADAERFAESKAELDSLLSIESLAQVPFLILGNKIDAYGAVSEEQLRHELGLYQ-TTGKGKIPLRD--IRPIEVFMCSVVMRQGY 178          
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1_ASPOR (Small COPII coat GTPase sar1 OS=Aspergillus oryzae GN=sar1 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.483e-47
Identity = 100/181 (55.25%), Postives = 120/181 (66.30%), Query Frame = 3
Query:  180 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLXNFTTGKGEVNLAELNVRPLEVFMCSIVRKMGY 722
            M++++WFY VLASLGL  K AK+LFLGLDNAGKTTLLHMLK++R+   QPT +PTSEEL+IG  +F  FDLGGHQ ARR+W                   ERF ESK              VPFL+LGNKID P A SE+ELR+ LGL   TTGKG+V L    +RP+EVFMCS+V + GY
Sbjct:    1 MWIINWFYDVLASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAVLQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPLE--GIRPIEVFMCSVVMRQGY 178          
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1_ASPFU (Small COPII coat GTPase sar1 OS=Aspergillus fumigatus GN=sar1 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.483e-47
Identity = 99/181 (54.70%), Postives = 120/181 (66.30%), Query Frame = 3
Query:  180 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLXNFTTGKGEVNLAELNVRPLEVFMCSIVRKMGY 722
            M++++WFY +LASLGL  K AK+LFLGLDNAGKTTLLHMLK++R+   QPT +PTSEEL+IG  +F  FDLGGHQ ARR+W                   ERF ESK              VPFL+LGNKID P A SE+ELR+ LGL   TTGKG+V L    +RP+EVFMCS+V + GY
Sbjct:    1 MWIINWFYDILASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVATLQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPLE--GIRPIEVFMCSVVMRQGY 178          
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1_ASPTN (Small COPII coat GTPase sar1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=sar1 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.648e-47
Identity = 99/181 (54.70%), Postives = 120/181 (66.30%), Query Frame = 3
Query:  180 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLXNFTTGKGEVNLAELNVRPLEVFMCSIVRKMGY 722
            M++++WFY +LASLGL  K AK+LFLGLDNAGKTTLLHMLK++R+   QPT +PTSEEL+IG  +F  FDLGGHQ ARR+W                   ERF ESK              VPFL+LGNKID P A SE+ELR+ LGL   TTGKG+V L    +RP+EVFMCS+V + GY
Sbjct:    1 MWIINWFYDILASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDYERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPLE--GIRPIEVFMCSVVMRQGY 178          
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1_ASPNC (Small COPII coat GTPase SAR1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sar1 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.648e-47
Identity = 100/181 (55.25%), Postives = 120/181 (66.30%), Query Frame = 3
Query:  180 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLXNFTTGKGEVNLAELNVRPLEVFMCSIVRKMGY 722
            M+L++WFY +LASLGL  K AK+LFLGLDNAGKTTLLHMLK++R+   QPT +PTSEEL+IG  +F  FDLGGHQ ARR+W                   ERF ESK              VPFL+LGNKID P A SE+ELR+ LGL   TTGKG+V L    +RP+EVFMCS+V + GY
Sbjct:    1 MWLINWFYDLLASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPLE--GIRPIEVFMCSVVMRQGY 178          
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1_CHAGB (Small COPII coat GTPase SAR1 OS=Chaetomium globosum GN=SAR1 PE=3 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 9.988e-47
Identity = 98/181 (54.14%), Postives = 121/181 (66.85%), Query Frame = 3
Query:  180 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLXNFTTGKGEVNLAELNVRPLEVFMCSIVRKMGY 722
            M++++WFY VL+SLGL  K AK+LFLGLDNAGKTTLLHMLK++R+   QPT +PTSEELSIG ++F  FDLGGHQ ARR+W                   ERF E+K              VPF+VLGNKID P A SE+ELR+ LG+   TTGKG+V L    +RP+EVFMCS+V + GY
Sbjct:    1 MWIINWFYDVLSSLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELSIGNVRFTTFDLGGHQQARRLWKDYFPEVNGVVFLVDAKDHERFPEAKAELDALLSMEELSKVPFVVLGNKIDHPDAVSEDELRHQLGMYQ-TTGKGKVPLE--GIRPIEVFMCSVVMRQGY 178          
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1B_MOUSE (GTP-binding protein SAR1b OS=Mus musculus GN=Sar1b PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.304e-46
Identity = 99/184 (53.80%), Postives = 115/184 (62.50%), Query Frame = 3
Query:  183 FLLDWFYG----VLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLXNFTTGKGEVNLAELNVRPLEVFMCSIVRKMGY 722
            F+ DW Y     VL  LGL++K  K++FLGLDNAGKTTLLHMLKD+RL QH PT +PTSEEL+I  + F  FDLGGH  ARRVW                   ER  ESK+            NVP L+LGNKID P A SEE LR   GL   TTGKG V+L ELN RPLEVFMCS++++ GY
Sbjct:    3 FIFDWIYSGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGY 186          
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1_TRIRE (Small COPII coat GTPase sar1 OS=Trichoderma reesei GN=sar1 PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.704e-46
Identity = 96/181 (53.04%), Postives = 120/181 (66.30%), Query Frame = 3
Query:  180 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLXNFTTGKGEVNLAELNVRPLEVFMCSIVRKMGY 722
            M++++WFY VL+SLGL  K AK+LFLGLDNAGKTTLLHMLK++R+   QPT +PTSEEL+IG ++F  FDLGGHQ ARR+W                   ERF E+K              VPF++LGNKID P A SE+ELR+ LGL   TTGKG V L    +RP+E+FMCS+V + GY
Sbjct:    1 MWIVNWFYDVLSSLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELAIGNVRFNTFDLGGHQQARRIWRDYFPDVNGVVFLVDAKDHERFPEAKAELDALLSMEELSKVPFVILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGRVQLE--GIRPIELFMCSVVMRQGY 178          
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1_MAGGR (Small COPII coat GTPase SAR1 OS=Magnaporthe grisea GN=SAR1 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.704e-46
Identity = 97/181 (53.59%), Postives = 121/181 (66.85%), Query Frame = 3
Query:  180 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLXNFTTGKGEVNLAELNVRPLEVFMCSIVRKMGY 722
            M++++WFY VL+SLGL  K AK+LFLGLDNAGKTTLLHMLK++R+   QPT +PTSEEL+IG ++F  FDLGGHQ ARR+W                   +RF E+K              VPF++LGNKID P A SEEELR+ LGL   TTGKG+V L    +RP+EVFMCS+V + GY
Sbjct:    1 MWIINWFYDVLSSLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHDRFPEAKAELDALLSMEELAKVPFVILGNKIDHPEAISEEELRHQLGLYQ-TTGKGKVPLE--GIRPIEVFMCSVVMRQGY 178          
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1B_RAT (GTP-binding protein SAR1b OS=Rattus norvegicus GN=Sar1b PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.704e-46
Identity = 99/184 (53.80%), Postives = 115/184 (62.50%), Query Frame = 3
Query:  183 FLLDWFYG----VLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLXNFTTGKGEVNLAELNVRPLEVFMCSIVRKMGY 722
            F+ DW Y     VL  LGL++K  K++FLGLDNAGKTTLLHMLKD+RL QH PT +PTSEEL+I  + F  FDLGGH  ARRVW                   ER  ESK+            NVP L+LGNKID P A SEE LR   GL   TTGKG V+L ELN RPLEVFMCS++++ GY
Sbjct:    3 FIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHLQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGY 186          
The following BLAST results are available for this feature:
BLAST of FC876181 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
SAR1_CRYNE4.483e-4754.70Small COPII coat GTPase SAR1 OS=Cryptococcus neofo... [more]
SAR1_ASPOR4.483e-4755.25Small COPII coat GTPase sar1 OS=Aspergillus oryzae... [more]
SAR1_ASPFU4.483e-4754.70Small COPII coat GTPase sar1 OS=Aspergillus fumiga... [more]
SAR1_ASPTN7.648e-4754.70Small COPII coat GTPase sar1 OS=Aspergillus terreu... [more]
SAR1_ASPNC7.648e-4755.25Small COPII coat GTPase SAR1 OS=Aspergillus niger ... [more]
SAR1_CHAGB9.988e-4754.14Small COPII coat GTPase SAR1 OS=Chaetomium globosu... [more]
SAR1B_MOUSE1.304e-4653.80GTP-binding protein SAR1b OS=Mus musculus GN=Sar1b... [more]
SAR1_TRIRE1.704e-4653.04Small COPII coat GTPase sar1 OS=Trichoderma reesei... [more]
SAR1_MAGGR1.704e-4653.59Small COPII coat GTPase SAR1 OS=Magnaporthe grisea... [more]
SAR1B_RAT1.704e-4653.80GTP-binding protein SAR1b OS=Rattus norvegicus GN=... [more]

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Properties
Property NameValue
Genbank descriptionC32001C09EF DevOvary1 Citrus clementina cDNA clone C32001C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876181 ID=FC876181; Name=FC876181; organism=Citrus clementina; type=EST; length=722bp
CTCGCCGGGGAAGCAGTCCCTGGTTGATTACGTTCGCCCACTGAACTTGC
TCATCTTAGGGTCAGTATCAAATCGAAACAGAGGCCTTGAATTGGACGAT
CTGATTCGTTCTCAGCCTTAGATCGTCGTAAATTCAAGCTCGATCCGTTT
TCGTTTCTAATTTGTCTACCGATAAAGCCATGTTTCTCCTCGACTGGTTC
TACGGCGTGCTGGCCTCCCTCGGTCTTTGGCAGAAAGAGGCCAAGATCTT
GTTTTTAGGGCTTGATAATGCTGGAAAAACAACGTTGCTTCACATGTTGA
AAGATGAGAGATTGGTTCAACATCAGCCAACACAGTATCCCACATCGGAA
GAGCTTAGTATTGGGAAAATTAAGTTCAAGGCGTTTGATTTGGGAGGCCA
TCAGATTGCTAGGAGAGTCTGGAAGGATTACTATGCGAAGGTTGATGCTG
TGGTATACCTAGTGGATGCCTATGACAAAGAGAGGTTTGCAGAATCAAAG
AAAGAACTGGATGCACTCCTTTCTGATGAGGCATTGGCCAATGTTCCTTT
TCTTGTGTTAGGAAACAAGATTGACATCCCTTATGCTGCTTCTGAGGAAG
AGTTGCGTTACCACCTTGGCCTATNCAATTTCACCACTGGGAAAGGGGAG
GTTAATCTAGCGGAACTCAATGTCCGTCCACTGGAGGTGTTTATGTGTAG
CATAGTTCGCAAAATGGGATAT
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