FC876209

Overview
NameFC876209
Unique NameFC876209
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length667
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10894 contig Ccv1_Contig10894:38..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C77A1_SOLME (Cytochrome P450 77A1 (Fragment) OS=Solanum melongena GN=CYP77A1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.546e-11
Identity = 48/156 (30.77%), Postives = 80/156 (51.28%), Query Frame = 2
Query:  101 ALYLPIFLALYVLTKQFLNKIRRLPPSPFLELPIIGHLYLLK---RPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHM-GCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRL 556
            A  L   L +++LT++  +K   LPP P    PI+G+L+ +    +     + +L  ++G I  L+ GSR +++V+S   A E   +   +FA+RP     + +  CN  S+  A YG  WR+LRR     +LS SRL+     R   +  L+ R+
Sbjct:    4 AFSLLFSLFIFLLTRKPKSKTPNLPPGP-PGWPIVGNLFQVAGSGKQFFEYIRDLKPKYGSIFTLKMGSRTMIIVASAELAHEALIQKGQIFASRPRENPTRTIFSCNKFSVNAAVYGPVWRSLRRNMVQNMLSPSRLKEFREFREIAMDKLIERI 158          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C79B1_SINAL (Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.637e-11
Identity = 52/200 (26.00%), Postives = 95/200 (47.50%), Query Frame = 2
Query:   83 TSMKSLALYLPIFLALYVLTKQFLNKIRRLPPSPFLELPIIGHL--YLLKRPIHRTLSNLSKR-HGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADE---VKSLVRRLFHNQLIESVDLRMEIYDLTMNVMMRMIAGKRYYGKH 664
            T++++      + L   VL      K   LPP P    PIIG +   L  RP+ R L ++ K+ +  I  +R GS  V+ V+ P  A E   + D +FA+RP       +   + +    P+G+ ++ +R+V   E++  +R + L   RA+E   + + V  + +N   +SVD R        N + +++ G R + ++
Sbjct:   28 TTLQAFVAITLVMLLKKVLVNDTNKKKLSLPPGP-TGWPIIGMVPTMLKSRPVFRWLHSIMKQLNTEIACVRLGSTHVITVTCPKIAREVLKQQDALFASRPMTYAQNVLSNGYKTCVITPFGEQFKKMRKVVMTELVCPARHRWLHQKRAEENDHLTAWVYNMVNNS--DSVDFRFVTRHYCGNAIKKLMFGTRTFSQN 224          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C71A8_MENPI (Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.444e-11
Identity = 46/160 (28.75%), Postives = 81/160 (50.62%), Query Frame = 2
Query:  173 PPSPFLELPIIGHLYLLKRPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLIESVDLRMEIYDLTMNVMMRMIAGKRY 652
            PPSP  +LPI+G+L  L    H  L +++++HGPI+LL  GS R +     P       +N      RP    G              YG++WR L+ +  +++LS+ R+Q   ++R +E + L++++  +    +V+L      LT +V+ R   G++Y
Sbjct:   50 PPSP-RKLPILGNLLQLGSLPHHNLRSMARKHGPIMLLHLGSVRPVSSRRRPRGNH---ENSRSRLRRPR---GSRSAALQLQGRVGGYGEYWRQLKTICVVQLLSNKRVQSFRSVREEETELLMKKIGDSS--GNVNLSHMFTQLTNDVVCRSAIGRKY 200          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C79F2_ARATH (Hexahomomethionine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79F2 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 7.672e-11
Identity = 49/176 (27.84%), Postives = 85/176 (48.30%), Query Frame = 2
Query:  155 NKIRRLPPSPFLELPIIGHL--YLLKRP----IHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFH-NQLIESVDLRMEIYDLTMNVMMRMIAGKRYYGK 661
            ++ R+LPP      PI+G+L   ++ RP     H  +  L      I    F     + ++S   A E F + D   A+RP L + + +G N+ ++  + YG+H+  +++V + EI+S   L +L   R  E  +L+  +    Q  E+VD+R         V MRM+ G+R+  K
Sbjct:   39 DRCRQLPPGR-PGWPILGNLPELIMTRPRSKYFHLAMKELKT---DIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIVESIGDNYKTMGTSSYGEHFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMRMLFGRRHVTK 210          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.672e-11
Identity = 34/106 (32.08%), Postives = 63/106 (59.43%), Query Frame = 2
Query:  236 HRTLSNLSKRHGPILLLRFGSR-RVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVR 550
            ++ ++ L +++GPIL L+ GS    +V+ +  +A E F  +D+ F++RP + V         S+A APYG++WR  RR+ ++E+    R+   +NIR + V  ++R
Sbjct:   13 YKKIACLKEKYGPILWLKIGSSMNTMVIQTANSASELFRNHDVSFSDRPIVDVNLAHNYYKGSMALAPYGNYWRFSRRICTVEMFVHKRINETTNIRQESVDKMLR 118          
The following BLAST results are available for this feature:
BLAST of FC876209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
C77A1_SOLME1.546e-1130.77Cytochrome P450 77A1 (Fragment) OS=Solanum melonge... [more]
C79B1_SINAL2.637e-1126.00Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE... [more]
C71A8_MENPI3.444e-1128.75Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8... [more]
C79F2_ARATH7.672e-1127.84Hexahomomethionine N-hydroxylase OS=Arabidopsis th... [more]
C76A1_SOLME7.672e-1132.08Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]

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Properties
Property NameValue
Genbank descriptionC32001G02EF DevOvary1 Citrus clementina cDNA clone C32001G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876209 ID=FC876209; Name=FC876209; organism=Citrus clementina; type=EST; length=667bp
GGAAAAAGGAGTGAGGCAATGCCCCCGATCTGAATTAAAGGTTCTCTCTC
ATGTTTCTTGGGCATAGCTAGCAGCCATACATACATCAATGAAGAGCTTG
GCTCTCTACTTGCCCATATTTCTGGCACTGTATGTCCTCACAAAGCAATT
TTTAAACAAAATCAGACGCCTCCCACCAAGTCCATTTCTTGAGCTACCCA
TAATTGGACATCTCTACCTCCTCAAGCGACCAATTCATAGAACACTATCC
AATTTATCAAAACGACACGGTCCCATTCTCCTCCTCCGATTCGGTTCTCG
CCGTGTCCTTGTTGTCTCATCACCACCAGCAGCCGAAGAATGCTTCACTA
AAAACGACATCGTCTTCGCCAACCGCCCTTCCTTGATGGTCGGCAAACAC
ATGGGTTGCAACTTCACGAGCCTCGCCTGGGCCCCATACGGCGACCACTG
GAGAAACCTTAGACGAGTCGCCTCGCTCGAAATTCTGTCCTCTTCTCGCC
TCCAACTCTTATCTAATATTCGCGCTGATGAGGTCAAATCTTTGGTCCGC
CGTCTCTTTCACAATCAATTGATCGAATCCGTTGACTTGAGGATGGAGAT
TTATGATCTCACAATGAATGTCATGATGAGGATGATCGCTGGAAAGAGAT
ATTACGGCAAACACGTG
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