FC876209

Overview
NameFC876209
Unique NameFC876209
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length667
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10894 contig Ccv1_Contig10894:38..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.306e-18
Identity = 58/167 (34.73%), Postives = 91/167 (54.49%), Query Frame = 2
Query:  164 RRLPPSPFLELPIIGHLYLLKRPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTS----LAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLI-ESVDLRMEIYDLTMNVMMRMIAGKR 649
            + LPPSP   LPIIGHL+L+    H+    LS RHGPI+ L  GS   +V S+  AA+E    ++I F+NRP   V    G  + S     A+AP+G +W+ ++++   E+LS   +     +R  E K  + R+F   +  E+VD   E+  L+ N++ RM   ++
Sbjct:   27 KNLPPSP-KALPIIGHLHLVSPIPHQDFYKLSTRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPGQNVAV-KGLAYDSQDFLFAFAPFGPYWKFMKKLCMSELLSGRMMDQFLPVRQQETKRFISRVFRKGVAGEAVDFGDELMTLSNNIVSRMTLSQK 191          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.306e-18
Identity = 58/194 (29.90%), Postives = 106/194 (54.64%), Query Frame = 2
Query:   68 LAAIHTSMKSLALYLPIFLALYVLTKQFLNKIRRLPPSPF--LELPIIGHLYLLKRPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLIESVDLRMEIYDLTMNVMMRMIAG 643
            L+ +     SL + + +F+ +  +T+      RR PP P      PIIG++ ++ +  HR L+NL+K++G +  LR G   +  VSSP  A +     D VF+NRP+ +   ++  +   +A+A YG  WR +R+V  +++ S  R +  +++R DEV  +VR +  N + + +++  +I+ LT N+  R   G
Sbjct:    9 LSKLSDPTTSLVIVVSLFIFISFITR------RRRPPYPPGPRGWPIIGNMLMMDQLTHRGLANLAKKYGGLCHLRMGFLHMYAVSSPEVARQVLQVQDSVFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKVCVMKVFSRKRAESWASVR-DEVDKMVRSVSCN-VGKPINVGEQIFALTRNITYRAAFG 194          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.306e-18
Identity = 52/182 (28.57%), Postives = 98/182 (53.85%), Query Frame = 2
Query:  116 IFLALYVLTKQFLNKIRRLPPSPFLELPIIGHLYLLKRPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLIES-VDLRMEIYDLTMNVMMRMIAGKRYYG 658
            +F +  ++ +      + LPP P   LPIIG+L+ L    HR++  LS+ +GP++ L+FGS   +V S+P   +E     D+   +RP++     +  N   L ++PY  +WR +R++  +E+ ++ R+Q   + R +EV +LV  +     +E  V+L  ++  L+ +V+ R+  G    G
Sbjct:   11 VFFSSMIIVRIIRKTKKNLPPGP-PRLPIIGNLHQLGSKPHRSMFKLSETYGPLMSLKFGSVSTVVASTPETVKEVLKTFDVECCSRPNMTYPARVTYNLKDLCFSPYSKYWREVRKMTVVELYTAKRVQSFQHTRKEEVAALVDFIKQAASLEKPVNLNKKLMKLSGSVICRVAFGINLQG 191          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.705e-18
Identity = 51/177 (28.81%), Postives = 95/177 (53.67%), Query Frame = 2
Query:  116 IFLALYVLTKQFLNKIRRLPPSPFLELPIIGHLYLLKRPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLIES-VDLRMEIYDLTMNVMMRMIAG 643
            +F +  ++ +      + LPP P   LPIIG+L+ L    H ++  LS+++GP++ LRFGS   +V S+P   +E     D    +RP +     +  N   + + PY  +WR +R++  +E+ ++ R+Q   + R +EV SLV  +     +E  V+L  ++  L+ +V+ R++ G
Sbjct:   11 VFFSTIIIVRNTRKTKKNLPPGP-PRLPIIGNLHQLGSKPHSSMFKLSEKYGPLMALRFGSVSTVVASTPETVKEVLKTFDAECCSRPYMTYPARLTYNLKDIGFCPYTKYWREVRKMTVVELYTAKRVQSFQHTRKEEVASLVDFITQAASLEKPVNLNTKLMKLSGSVICRVVFG 186          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.227e-18
Identity = 55/187 (29.41%), Postives = 98/187 (52.41%), Query Frame = 2
Query:   98 LALYLPIFLALYVLTKQFLNKIRRLPPSPFLELPIIGHLYLLKRPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQL-IESVDLRMEIYDLTMNVMMRMIAGKRYY 655
            L L+L   ++L  + K+  +    LPPSP    P+IG+L+ +    HR+   L++R G ++LL FG   V V+SS  AAEE    +D+    RP L+  + +   F  +++ PYG+ WR  R+    E+    ++Q    I  +E   LV++L  + +    VDL   ++ L  +++ R+  G+ ++
Sbjct:    6 LCLFLITLVSLIFVVKKIKHSKWDLPPSP-PTFPVIGNLHQVGELPHRSFQRLAERTGHVMLLHFGFVPVTVISSREAAEEVLRTHDLKCCTRPKLVGSRLISRGFKDISFTPYGEEWRERRKFLVRELFCFKKVQYFGYIVEEECNLLVKKLTESAVGRPPVDLSKSLFWLAASILFRIAFGQSFH 191          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C71BE_ARATH (Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=CYP71B14 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.909e-18
Identity = 50/173 (28.90%), Postives = 97/173 (56.07%), Query Frame = 2
Query:  119 FLALYVLTKQFLNKIRRLPPSPFLELPIIGHLYLLKRPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRL-FHNQLIESVDLRMEIYDLTMNVMMRM 634
            F A  ++ K      + LPP P   LPIIG+L+ L     R+L  LS+++G ++ L+FG+   +V S+P   ++     D    +RP +     +  NF  LA++PY  +WR +R++  +E+ ++ R++   N+R +EV S V  +  H  L ++V+++ ++  L+ +V+ ++
Sbjct:   12 FFAFILIAKDTRTTKKNLPPGP-PRLPIIGNLHQLGSKPQRSLFKLSEKYGSLMSLKFGNVSAVVASTPETVKDVLKTFDAECCSRPYMTYPARVTYNFNDLAFSPYSKYWREVRKMTVIELYTAKRVKSFQNVRQEEVASFVDFIKQHASLEKTVNMKQKLVKLSGSVICKV 183          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.799e-18
Identity = 56/189 (29.63%), Postives = 103/189 (54.50%), Query Frame = 2
Query:   95 SLALYLPIFLALYVLTKQFLNKIRRLPPSPFLELPIIGHLYLLKRPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLIES-VDLRMEIYDLTMNVMMRMIAGKRYYG 658
            SL L + I L   V  K    +  R PPSP   LPIIG+L+ L    H++L  LSK++GP++LL+ G    ++VS+P  A++     D+   +RPSL   + +  N+  +A++ + D+W+ LR++   E+  + R+  +  I+  E++ L+  +  +   ++ V+L      L +NV+ + + G  + G
Sbjct:    8 SLILLISILL---VAVKHSKRRWVRQPPSP-PGLPIIGNLHQLGELPHQSLCKLSKKYGPVMLLKLGRVPTVIVSTPETAKQVLKDYDLHCCSRPSLEGTRKLSYNYLDIAFSRFDDYWKELRKLCVEELFCNKRINSIQPIKEAEMEKLIDSIAESASQKTLVNLSDTFLSLNVNVICKAVFGVNFQG 192          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.961e-18
Identity = 63/185 (34.05%), Postives = 100/185 (54.05%), Query Frame = 2
Query:  119 FLALYVLTKQFLNKIR----RLPPSPFLELPIIGHLYLLKRPIH-RTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLIES-VDLRMEIYDLTMNVMMRMIAGKRYY 655
            FL L  L   FLN ++    +LPP P  +LPIIG+L+  +R +H R   NL++ +GP+ LL++G   V+ +SS  AAEE    ND+   +RP     +    NF  +  AP+GD W  +R+++ +E+ S  +LQ    I  +E    V++L      +S V+L   I+ L  N++ R+  G   Y
Sbjct:    7 FLVLLPLILIFLNVLKPSKYKLPPGP-KKLPIIGNLHQ-RRTLHPRNRRNLAEMYGPVALLQYGFVPVVAISSKEAAEEVLKINDLECCSRPEAAGMRATFYNFKDIGMAPFGDEWSLMRKLSVVELFSVKKLQSFKYIIEEENNLCVKKLSEFATRQSPVNLERAIFTLVGNIVCRIGYGINLY 189          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.480e-18
Identity = 59/193 (30.57%), Postives = 101/193 (52.33%), Query Frame = 2
Query:   95 SLALYLPIFLALYVLTKQFLNKIR--RLPPSPFLELPIIGHLYLLKRPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLI-----ESVDLRMEIYDLTMNVMMRMIAGKRY 652
            SL L + + + L  L+   LN++R  RLPP P    P++G+L  +K    R     ++R+GP++ + FGS   +VVS+   A+E   +ND   A+RP     +    N   L WA YG H+  +R++ +LE+ +  RL+ L  IR DEV ++V  ++          + + +R  +  +  N + R+  GKR+
Sbjct:    4 SLLLSVALAVVLIPLSLALLNRLRLGRLPPGP-RPWPVLGNLRQIKPIRCRCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNGQDLIWADYGPHYIKVRKLCNLELFTPKRLEALRPIREDEVTAMVESVYRAATAPGNEGKPMVVRNHLSMVAFNNITRLAFGKRF 195          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.463e-18
Identity = 54/188 (28.72%), Postives = 102/188 (54.26%), Query Frame = 2
Query:  110 LPIFLALYVLTKQFLNK----IRRLPPSPFLELPIIGHLYLLKRPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLIES-VDLRMEIYDLTMNVMMRMIAGKRYYG 658
            LP+   + +L   F +K     R+ P  P    PIIG+L+ +    H+TL  LSK++GP++ L  G    +VVSS   A +    +D+    RPSL   + +  N+  +A++PY D+W+ +R++   E+ S+ ++  +  I+ +EVK ++  +  +   ++ V+L  +  +LT++V+ R   G  + G
Sbjct:    7 LPLIFLVCILLAVFNHKKHPKYRQFPCPP--GFPIIGNLHQIGELPHQTLWKLSKKYGPVMHLMLGRVPTVVVSSSDTARQVLRVHDLHCCTRPSLSGPRELSYNYLDIAFSPYDDYWKEVRKLCVQELFSTKQVHSIQPIKDEEVKKMIDSIAESASQKNPVNLNNKCLELTVSVVCRTAFGVSFEG 192          
The following BLAST results are available for this feature:
BLAST of FC876209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
C93A1_SOYBN1.306e-1834.73Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C84A1_ARATH1.306e-1829.90Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C71BC_ARATH1.306e-1828.57Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]
C71BB_ARATH1.705e-1828.81Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]
C71BG_ARATH2.227e-1829.41Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
C71BE_ARATH2.909e-1828.90Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=C... [more]
C71BA_ARATH3.799e-1829.63Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C71BF_ARATH4.961e-1834.05Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]
C98A1_SORBI6.480e-1830.57Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C71BW_ARATH8.463e-1828.72Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32001G02EF DevOvary1 Citrus clementina cDNA clone C32001G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876209 ID=FC876209; Name=FC876209; organism=Citrus clementina; type=EST; length=667bp
GGAAAAAGGAGTGAGGCAATGCCCCCGATCTGAATTAAAGGTTCTCTCTC
ATGTTTCTTGGGCATAGCTAGCAGCCATACATACATCAATGAAGAGCTTG
GCTCTCTACTTGCCCATATTTCTGGCACTGTATGTCCTCACAAAGCAATT
TTTAAACAAAATCAGACGCCTCCCACCAAGTCCATTTCTTGAGCTACCCA
TAATTGGACATCTCTACCTCCTCAAGCGACCAATTCATAGAACACTATCC
AATTTATCAAAACGACACGGTCCCATTCTCCTCCTCCGATTCGGTTCTCG
CCGTGTCCTTGTTGTCTCATCACCACCAGCAGCCGAAGAATGCTTCACTA
AAAACGACATCGTCTTCGCCAACCGCCCTTCCTTGATGGTCGGCAAACAC
ATGGGTTGCAACTTCACGAGCCTCGCCTGGGCCCCATACGGCGACCACTG
GAGAAACCTTAGACGAGTCGCCTCGCTCGAAATTCTGTCCTCTTCTCGCC
TCCAACTCTTATCTAATATTCGCGCTGATGAGGTCAAATCTTTGGTCCGC
CGTCTCTTTCACAATCAATTGATCGAATCCGTTGACTTGAGGATGGAGAT
TTATGATCTCACAATGAATGTCATGATGAGGATGATCGCTGGAAAGAGAT
ATTACGGCAAACACGTG
back to top