FC876212
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: GAE1_ARATH (UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana GN=GAE1 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.003e-12 Identity = 56/175 (32.00%), Postives = 79/175 (45.14%), Query Frame = 2 Query: 155 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD--YCSNLKNLIPSKASSNFKFV-RGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 670 ++L+TGA GF+ SHV L + +V LD + Y +LK S SS FV GD+ A L+ L + +MH AAQ V + N + +NI G LLE CK + S+ VYG ++ + Q P + Y+ATK E + Y YGL Sbjct: 89 SVLVTGATGFVGSHVSLALRKRGDG--VVGLDNFNNYYDPSLKRARRSLLSSRGIFVVEGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVRYALENPQSYVHSNIAGLVNLLEICKAANPQPAIVWASSSSVYGLNEKVPFSESDRTDQ--PASLYAATKKAGEEITHTYNHIYGL 259
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: GALE_NEIGO (UDP-glucose 4-epimerase OS=Neisseria gonorrhoeae GN=galE PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.146e-12 Identity = 49/165 (29.70%), Postives = 79/165 (47.88%), Query Frame = 2 Query: 158 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK---ASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 643 +LITG GFI SH L+++ Y V+LD L C++ ++P N F +GDI ++ + I++++HFA V S ++ NN+YG+ VL E G + + + S+ VYG D + V + NPY A+KA E ++ Sbjct: 3 VLITGGTGFIGSHTAVSLVQS--GYDAVILDNL--CNSSAAVLPRLRQITGRNIPFYQGDIRDCQILRQIFSEHEIESVIHFAGLKAVGESVAEPTKYYGNNVYGSLVLAEEMARAG-VLKIVFSSSATVYG--DAEKVPYTEDMRPGDTANPYGASKAMVERML 160
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: GALE_LACHE (UDP-glucose 4-epimerase OS=Lactobacillus helveticus GN=galE PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.146e-12 Identity = 52/171 (30.41%), Postives = 83/171 (48.54%), Query Frame = 2 Query: 158 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 670 +L+ G AG+I SH L++ + ++VLD L Y + K + P KF +GDI LV+ +L E ID +MHFAA + V S ++ NN+ G LL+A ++ + S+ YG + + E + L P NPY TK E ++ ++ G+ Sbjct: 3 VLVIGGAGYIGSHAVRELVKEGND--VLVLDAL-YTGHRKAVDPKA-----KFYQGDIEDTFLVSKILRDEKIDAVMHFAAYSLVPESVKKPLKYYDNNVTGMISLLQAMN-DANVKYLVFSSSAATYGIPKKLPIT---EDTPLNPINPYGETKMMMEKIMAWADKADGI 161
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: GALE_ERWAM (UDP-glucose 4-epimerase OS=Erwinia amylovora GN=galE PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.560e-11 Identity = 51/171 (29.82%), Postives = 80/171 (46.78%), Query Frame = 2 Query: 155 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLK-NLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQL-LPTNPYSATKAGAEMLVMAYGRS 661 +IL+TG AG+I SH L++ + +V+LD L S N + F GD+ + + I ++HFA V S E+ +NN+ GT VLLE + G + +FI S+ VYG DA V E + + T+PY +K E ++ Y ++ Sbjct: 2 SILVTGGAGYIGSHTVLSLLQRGDD--VVILDNLSNASRESINRVEKLTGKTATFFEGDLLDRSCLRSVFSAHRISAVIHFAGLKAVGASTRKPLEYYQNNVTGTLVLLEEMRSAG-VNQFIFSSSATVYG---ADAPVPYVETTPIGGTTSPYGTSKLMVEQILRDYAKA 166
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: GALE_PASHA (UDP-glucose 4-epimerase OS=Pasteurella haemolytica GN=galE PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.038e-11 Identity = 48/163 (29.45%), Postives = 77/163 (47.24%), Query Frame = 2 Query: 158 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLK-NLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 643 IL+TG AG+I SH L+ E IVVLD L S + + + KF +GDI D++ + I++++HFA V + N + KNN+ G+ VL+E + + + S+ VYG+ +V + TNPY +K E ++ Sbjct: 3 ILVTGGAGYIGSHTLVELLNENRE--IVVLDNLSNSSEVSLERVKQITGKSVKFYQGDILDRDILRKIFAENQIESVIHFAGLKAVGETSENRYVTIKNNVTGSIVLVEE-MLKANVNTIVFSSSATVYGDPQIIPIVESCPVGG--TTNPYGTSKYMVERIL 160
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: GALE_NEIMC (UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup C GN=galE PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.038e-11 Identity = 47/167 (28.14%), Postives = 82/167 (49.10%), Query Frame = 2 Query: 152 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP---SKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 643 K IL+TG GFI SH L+++ +++V+LD L C++ N++P + F +GDI +++ + ID+++HFA V S ++ NN+ G+ VL E G + + + S+ VYG D V + T+PY +K+ E ++ Sbjct: 2 KKILVTGGTGFIGSHTVVSLLKS--GHQVVILDNL--CNSSINILPRLKTITGQEIPFYQGDIRDREILRRIFAENRIDSVIHFAGLKAVGESVAEPMKYYDNNVSGSLVLAEEMARAG-VFKIVFSSSATVYG--DPGKVPYTEDMQPGDTTSPYGTSKSMVERIL 161
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: GALE_NEIMB (UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup B GN=galE PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.038e-11 Identity = 48/167 (28.74%), Postives = 82/167 (49.10%), Query Frame = 2 Query: 152 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP---SKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 643 K IL+TG GFI SH L+++ +++V+LD L C++ N++P + F +GDI +++ + ID+++HFA V S ++ NN+ G+ VL E G + + S+ VYG D V + T+PY A+K+ E ++ Sbjct: 2 KKILVTGGTGFIGSHTVVSLLKS--GHQVVILDNL--CNSSINILPRLKTITGQEIPFYQGDIRDREILRRIFAENRIDSVIHFAGLKAVGESVAEPMKYYDNNVSGSLVLAEEMARAG-VFSIVFSSSATVYG--DPGKVPYTEDMPPGDTTSPYGASKSMVERIL 161
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: GAL10_SCHPO (Bifunctional protein gal10 OS=Schizosaccharomyces pombe GN=gal10 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.038e-11 Identity = 50/164 (30.49%), Postives = 81/164 (49.39%), Query Frame = 2 Query: 158 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL-DYCSNLKNLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGE-TDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 643 IL+TG AG+I SH LI + YK++++D L + C + + + KF + D+ + + + T I ++HFAA V S E+ NNI GT LL + +++ + S+ VYG+ T D ++ E+ PTNPY TK E ++ Sbjct: 8 ILVTGGAGYIGSHTVIELINH--GYKVIIVDNLCNSCYDAVARVEFIVRKSIKFFKLDLRDKEGLAQIFDTFKIKGVIHFAALKAVGESMKLPLEYYDNNICGTITLLNVMR-EHRVKTVVFSSSATVYGDATRFDNMIPIPESCPNDPTNPYGKTKYAIENII 168
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: EXOB_RHIME (UDP-glucose 4-epimerase OS=Rhizobium meliloti GN=exoB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.038e-11 Identity = 58/178 (32.58%), Postives = 77/178 (43.26%), Query Frame = 2 Query: 155 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVR------GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 670 NIL+ G AG+I SH C +L Y+ VV D L ++ + +FV+ GDI ++ +L I+HFAA V S + F NN+ GT LL A G I F+ ST YG D V E+ + P NPY TK E + YG GL Sbjct: 5 NILVVGGAGYIGSHTCLQLAAK--GYQPVVYDNL-------------SNGHEEFVKWGVLEKGDIRDRQRLDEVLARHKPRAILHFAAMIEVGESVKDPAAFYDNNVIGTLTLLSAALAAG-IDAFVFSSTCATYGLPDS---VPMDESHKQAPINPYGRTKWICEQALKDYGLYKGL 163
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: GALE_STRMU (UDP-glucose 4-epimerase OS=Streptococcus mutans GN=galE PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.661e-11 Identity = 52/172 (30.23%), Postives = 84/172 (48.84%), Query Frame = 2 Query: 158 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVRGDIASADLVNFLL-ITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 670 IL+ G AG+I SH+ +RLI E ++VV+D L + + P+ KF +GD+A + ++ + +D ++HFAA + V S ++ NN G LLE G ++ + ST YG DE + E + P NPY +K E ++ R+YG+ Sbjct: 3 ILVLGGAGYIGSHMVDRLIEK-GEEEVVVVDSL-VTGHRAAVHPAA-----KFYQGDLADREFMSMVFRENPDVDAVIHFAAYSLVAESMKKPLKYFDNNTAGMIKLLEVMSEFG-VKYIVFSSTAATYGIPDEIPI---KETTPQRPINPYGESKLMMETIMKWSDRAYGI 163 The following BLAST results are available for this feature:
BLAST of FC876212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876212 ID=FC876212; Name=FC876212; organism=Citrus clementina; type=EST; length=670bpback to top |