FC876217

Overview
NameFC876217
Unique NameFC876217
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length640
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:50..689. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876217 vs. ExPASy Swiss-Prot
Match: SAHH_PIG (Adenosylhomocysteinase OS=Sus scrofa GN=AHCY PE=3 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 2.437e-35
Identity = 75/135 (55.56%), Postives = 92/135 (68.15%), Query Frame = 2
Query:  119 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 523
            +KV D+S A +GR  ++LAE EMPGLM  R  +  S+P KGA+I G LHMT++TAVLIETL ALGAEVRW SCNIFSTQDH              WKGET +EY WC E+ L +   G  ++I+DDGGD T L+H
Sbjct:    7 YKVADISLAAWGRKALDLAENEMPGLMRMREMYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTL-YFKDGPLNMILDDGGDLTNLVH 140          
BLAST of FC876217 vs. ExPASy Swiss-Prot
Match: SAHH_BOVIN (Adenosylhomocysteinase OS=Bos taurus GN=AHCY PE=2 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 2.437e-35
Identity = 76/135 (56.30%), Postives = 92/135 (68.15%), Query Frame = 2
Query:  119 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 523
            +KV D+S A +GR  ++LAE EMPGLM  R  +  S+P KGA+I G LHMT++TAVLIETL ALGAEVRW SCNIFSTQDH              WKGET +EY WC E+ L +   G  ++I+DDGGD T LIH
Sbjct:    7 YKVADISLAAWGRKALDLAENEMPGLMHMREMYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTL-YFKDGPLNMILDDGGDLTNLIH 140          
BLAST of FC876217 vs. ExPASy Swiss-Prot
Match: SAHH_RAT (Adenosylhomocysteinase OS=Rattus norvegicus GN=Ahcy PE=1 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 7.089e-35
Identity = 74/135 (54.81%), Postives = 91/135 (67.41%), Query Frame = 2
Query:  119 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 523
            +KV D+  A +GR  +++AE EMPGLM  R  +  S+P KGA+I G LHMT++TAVLIETL ALGAEVRW SCNIFSTQDH              WKGET +EY WC E+ L +   G  ++I+DDGGD T LIH
Sbjct:    7 YKVADIGLAAWGRKALDIAENEMPGLMRMREMYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAKAGIPVFAWKGETDEEYLWCIEQTLHF-KDGPLNMILDDGGDLTNLIH 140          
BLAST of FC876217 vs. ExPASy Swiss-Prot
Match: SAHH_MOUSE (Adenosylhomocysteinase OS=Mus musculus GN=Ahcy PE=1 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 7.089e-35
Identity = 74/135 (54.81%), Postives = 91/135 (67.41%), Query Frame = 2
Query:  119 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 523
            +KV D+  A +GR  +++AE EMPGLM  R  +  S+P KGA+I G LHMT++TAVLIETL ALGAEVRW SCNIFSTQDH              WKGET +EY WC E+ L +   G  ++I+DDGGD T LIH
Sbjct:    7 YKVADIGLAAWGRKALDIAENEMPGLMRMREMYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAKAGIPVFAWKGETDEEYLWCIEQTLHF-KDGPLNMILDDGGDLTNLIH 140          
BLAST of FC876217 vs. ExPASy Swiss-Prot
Match: SAHH_MACFA (Adenosylhomocysteinase OS=Macaca fascicularis GN=AHCY PE=2 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 9.259e-35
Identity = 73/135 (54.07%), Postives = 92/135 (68.15%), Query Frame = 2
Query:  119 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 523
            +KV D+  A +GR  +++AE EMPGLM  R ++  S+P KGA+I G LHMT++TAVLIETL ALGAEV+W SCNIFSTQDH              WKGET +EY WC E+ L +   G  ++I+DDGGD T LIH
Sbjct:    7 YKVADIGLAAWGRKALDIAENEMPGLMRMREQYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVQWSSCNIFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTL-YFKDGPLNMILDDGGDLTNLIH 140          
BLAST of FC876217 vs. ExPASy Swiss-Prot
Match: SAHH_BDEBA (Adenosylhomocysteinase OS=Bdellovibrio bacteriovorus GN=ahcY PE=3 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 9.259e-35
Identity = 83/166 (50.00%), Postives = 98/166 (59.04%), Query Frame = 2
Query:  143 ADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKAL-DWGPGGGPDLIVDDGGDATLLIHE-------------------GVKAEEIYEKTGKLPDPA 580
            A +GR EI++AE EMPGLMA R E+   QP KGA+I G LHMTIQTAVLIETL  LGAE+RW SCNIFSTQDH              WKG T QE+ WC E+ +  WG  G  ++I+DDGGD T ++HE                   GV   E+  K GKL  PA
Sbjct:   41 AKWGREEIKIAETEMPGLMALRKEYKKQQPLKGARIAGCLHMTIQTAVLIETLVELGAEIRWSSCNIFSTQDHAAAAIAAAGIPVFAWKGLTEQEFNWCIEQTIVGWGKEGF-NMILDDGGDLTNMMHEPRFAKEMKKIIGISEETTTGVHNLEVLVKQGKLKVPA 205          
BLAST of FC876217 vs. ExPASy Swiss-Prot
Match: SAHH_PSEFS (Adenosylhomocysteinase OS=Pseudomonas fluorescens (strain SBW25) GN=ahcY PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.579e-34
Identity = 77/147 (52.38%), Postives = 93/147 (63.27%), Query Frame = 2
Query:   89 SVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 526
            +V   A   ++KV D+S A +GR E  +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQD               WKGET +EY WC E+  L  G     ++I+DDGGD T L+H+
Sbjct:    3 AVNTPADFNDYKVADMSLAAWGRRETFIAESEMPALMGLRRKYAAEQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEEEYEWCLEQTILKDGAPWDANMILDDGGDLTELLHK 149          
BLAST of FC876217 vs. ExPASy Swiss-Prot
Match: SAHH_PSE14 (Adenosylhomocysteinase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=ahcY PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.579e-34
Identity = 76/142 (53.52%), Postives = 92/142 (64.79%), Query Frame = 2
Query:  104 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 526
            A   ++KV D+S A +GR E  +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQD               WKGET +EY WC E+  L  G     ++I+DDGGD T++IH+
Sbjct:    8 AEFNDYKVADISLAAWGRRETIIAESEMPALMGLRRKYAGDQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEEEYEWCIEQTILKDGQPWDANMILDDGGDLTVIIHK 149          
BLAST of FC876217 vs. ExPASy Swiss-Prot
Match: SAHH_HAHCH (Adenosylhomocysteinase OS=Hahella chejuensis (strain KCTC 2396) GN=ahcY PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.579e-34
Identity = 72/137 (52.55%), Postives = 92/137 (67.15%), Query Frame = 2
Query:  116 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW-GPGGGPDLIVDDGGDATLLIH 523
            ++KVKD+S A +GR EI++AE EMP LM  R ++   QP  GA+I G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQDH              WKGET +EY WC ++ +   G     ++++DDGGD T ++H
Sbjct:   12 DYKVKDISLAAWGRKEIDIAEGEMPALMTLREKYRAQQPLAGARILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAAAGVPVFAWKGETEEEYVWCIKQTITKDGQPWNANMVLDDGGDLTEILH 148          
BLAST of FC876217 vs. ExPASy Swiss-Prot
Match: SAHH_PSEU2 (Adenosylhomocysteinase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=ahcY PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.063e-34
Identity = 77/147 (52.38%), Postives = 93/147 (63.27%), Query Frame = 2
Query:   89 SVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 526
            +V   A   ++KV D+S A +GR E  +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQD               WKGET +EY WC E+  L  G     ++I+DDGGD T +IH+
Sbjct:    3 AVMTPAEFNDYKVADISLAAWGRRETIIAESEMPALMGLRRKYAGDQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEEEYEWCIEQTILKDGQPWDANMILDDGGDLTEIIHK 149          
The following BLAST results are available for this feature:
BLAST of FC876217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_PIG2.437e-3555.56Adenosylhomocysteinase OS=Sus scrofa GN=AHCY PE=3 ... [more]
SAHH_BOVIN2.437e-3556.30Adenosylhomocysteinase OS=Bos taurus GN=AHCY PE=2 ... [more]
SAHH_RAT7.089e-3554.81Adenosylhomocysteinase OS=Rattus norvegicus GN=Ahc... [more]
SAHH_MOUSE7.089e-3554.81Adenosylhomocysteinase OS=Mus musculus GN=Ahcy PE=... [more]
SAHH_MACFA9.259e-3554.07Adenosylhomocysteinase OS=Macaca fascicularis GN=A... [more]
SAHH_BDEBA9.259e-3550.00Adenosylhomocysteinase OS=Bdellovibrio bacteriovor... [more]
SAHH_PSEFS1.579e-3452.38Adenosylhomocysteinase OS=Pseudomonas fluorescens ... [more]
SAHH_PSE141.579e-3453.52Adenosylhomocysteinase OS=Pseudomonas syringae pv.... [more]
SAHH_HAHCH1.579e-3452.55Adenosylhomocysteinase OS=Hahella chejuensis (stra... [more]
SAHH_PSEU22.063e-3452.38Adenosylhomocysteinase OS=Pseudomonas syringae pv.... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32001H01EF DevOvary1 Citrus clementina cDNA clone C32001H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876217 ID=FC876217; Name=FC876217; organism=Citrus clementina; type=EST; length=640bp
GTGGTCGGGTTCACAAAGAGAGAGTATAGTGACCTCTCTTCCTTCTTCCT
TTTAGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAA
TCCGCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTT
CGGCCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGG
CTTGCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATC
ACCGGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCT
CACCGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAA
CCCAAGACCACGCGGCCGCCGCCATCGCACGTGACTCCGCCTCCGTCTTT
GCCTGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACGGAGAAAGC
CCTGGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCGATGACGGTG
GTGACGCCACGTTGTTGATCCACGAGGGAGTCAAAGCTGAGGAGATCTAC
GAGAAGACCGGGAAGTTGCCCGACCCGGCCTCCACCGACTACGCCGAGTT
TCAGATTGTTTTGACTATCATTAGAGATGGGTTGAAGGCC
back to top