FC876218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876218 vs. ExPASy Swiss-Prot
Match: THS2_ARAHY (Putative stilbene synthase 2 (Fragment) OS=Arachis hypogaea PE=5 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 2.890e-52 Identity = 86/105 (81.90%), Postives = 96/105 (91.43%), Query Frame = 2 Query: 281 LKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENN 595 LKENPNMCAY APSLDAR+D+++ EVP++GKEAATKAIKEWGQP SKITHLIFCTTSGV +PG DY+L L+GL PSVKR+MMY QGCFAGGTVLRLAKDLAENN Sbjct: 1 LKENPNMCAYKAPSLDAREDMMIREVPRVGKEAATKAIKEWGQPMSKITHLIFCTTSGVALPGVDYELIVLLGLDPSVKRYMMYHQGCFAGGTVLRLAKDLAENN 105 HSP 2 Score: 43.1282 bits (100), Expect = 2.890e-52 Identity = 19/25 (76.00%), Postives = 23/25 (92.00%), Query Frame = 1 Query: 601 ARVLVVCSEITAVTFRGPADTHLDS 675 ARVL+VCSE TAVTFRGP++T +DS Sbjct: 108 ARVLIVCSENTAVTFRGPSETDMDS 132
BLAST of FC876218 vs. ExPASy Swiss-Prot
Match: CHS6_MEDSA (Chalcone synthase 6-4 (Fragment) OS=Medicago sativa GN=CHS6-4 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.261e-46 Identity = 73/77 (94.81%), Postives = 75/77 (97.40%), Query Frame = 2 Query: 365 LGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENN 595 LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENN Sbjct: 1 LGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENN 77 HSP 2 Score: 54.299 bits (129), Expect = 1.261e-46 Identity = 24/27 (88.89%), Postives = 27/27 (100.00%), Query Frame = 1 Query: 595 QGARVLVVCSEITAVTFRGPADTHLDS 675 +GARVLVVCSE+TAVTFRGP+DTHLDS Sbjct: 78 KGARVLVVCSEVTAVTFRGPSDTHLDS 104
BLAST of FC876218 vs. ExPASy Swiss-Prot
Match: CHS7_MEDSA (Chalcone synthase (Fragment) OS=Medicago sativa GN=CHSII PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.954e-33 Identity = 53/58 (91.38%), Postives = 55/58 (94.83%), Query Frame = 2 Query: 422 ITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENN 595 ITHLI CTTS VDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENN Sbjct: 1 ITHLIVCTTS-VDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENN 57 HSP 2 Score: 54.299 bits (129), Expect = 5.954e-33 Identity = 24/27 (88.89%), Postives = 27/27 (100.00%), Query Frame = 1 Query: 595 QGARVLVVCSEITAVTFRGPADTHLDS 675 +GARVLVVCSE+TAVTFRGP+DTHLDS Sbjct: 58 KGARVLVVCSEVTAVTFRGPSDTHLDS 84
BLAST of FC876218 vs. ExPASy Swiss-Prot
Match: CHSY_MALDO (Chalcone synthase (Fragment) OS=Malus domestica GN=CHS PE=2 SV=1) HSP 1 Score: 54.6842 bits (130), Expect = 8.090e-17 Identity = 25/27 (92.59%), Postives = 27/27 (100.00%), Query Frame = 1 Query: 595 QGARVLVVCSEITAVTFRGPADTHLDS 675 +GARVLVVCSEITAVTFRGP+DTHLDS Sbjct: 25 KGARVLVVCSEITAVTFRGPSDTHLDS 51 HSP 2 Score: 53.1434 bits (126), Expect = 8.090e-17 Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 524 MMYQQGCFAGGTVLRLAKDLAENN 595 MMYQQGCFAGGTVLRLAKDLAENN Sbjct: 1 MMYQQGCFAGGTVLRLAKDLAENN 24
BLAST of FC876218 vs. ExPASy Swiss-Prot
Match: PKS1_DICDI (Probable polyketide synthase 1 OS=Dictyostelium discoideum GN=stlA PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.210e-16 Identity = 54/196 (27.55%), Postives = 99/196 (50.51%), Query Frame = 2 Query: 2 TLTKHEPQTYSLRVQLEMATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAE 589 ++ +H+ Q ++V ++ R + +++ + VL IG + P ++Q D + E EK KR+ ++S IK R++ + + EN ++ D V VP L ++A +A+K+WG K ITH++ T++G+ +P +++L L+GL V+R + GC AG + LR A LA+ Sbjct: 2755 SVQQHQKQQQKVQV-IQQQQQPLSRLSYKSNNNSFVLGIGISVPGEPISQQSLKDSISNDFSDK--AETNEKVKRIFEQSQIKTRHL-VRDYTKPENSIKFRHLETITDVNNQFKKV-VPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAK 2945 HSP 2 Score: 21.1718 bits (43), Expect = 6.210e-16 Identity = 7/14 (50.00%), Postives = 12/14 (85.71%), Query Frame = 1 Query: 604 RVLVVCSEITAVTF 645 R+LVVC+E+ ++ F Sbjct: 2951 RILVVCTEVCSLHF 2964 The following BLAST results are available for this feature:
BLAST of FC876218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876218 ID=FC876218; Name=FC876218; organism=Citrus clementina; type=EST; length=675bpback to top |