FC876222

Overview
NameFC876222
Unique NameFC876222
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10260 contig Ccv1_Contig10260:4..724. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876222 vs. ExPASy Swiss-Prot
Match: CHSB_PETHY (Chalcone synthase B OS=Petunia hybrida GN=CHSB PE=2 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 2.350e-88
Identity = 152/213 (71.36%), Postives = 186/213 (87.32%), Query Frame = 1
Query:   82 AQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLPPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALXRDGAAAV 720
            AQRA+GPA +LAIGTATP H V+Q  YPDYYFR+T S+H+ +LKEKF+R+C K+MIKKR+M+LTEE+L++NP +C++  PSLD RQDI+V E+PKLGKEAA KAI EWGQPKS ITHL+FCT SGVDMPGAD QL KL+GL PSV+R MMYQQGCFAGGT+LRLAKDLAENNKGARVLVVC+E +A+ FRGP++ ++D+L+ QAL  DGAAA+
Sbjct:   13 AQRAEGPAKILAIGTATPFHWVDQNSYPDYYFRVTNSQHLVDLKEKFRRICSKTMIKKRHMFLTEELLRKNPTLCSHNEPSLDIRQDILVSEIPKLGKEAALKAIGEWGQPKSTITHLVFCTRSGVDMPGADCQLVKLLGLSPSVQRLMMYQQGCFAGGTMLRLAKDLAENNKGARVLVVCAESSAIGFRGPSEANVDNLIAQALFGDGAAAL 225          
BLAST of FC876222 vs. ExPASy Swiss-Prot
Match: DPS2_PINST (Pinosylvin synthase 2 OS=Pinus strobus GN=STS2 PE=2 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 7.075e-85
Identity = 152/220 (69.09%), Postives = 188/220 (85.45%), Query Frame = 1
Query:   64 VQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYM-APSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLPPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALXRDGAAAV 720
            ++  R +QRADG A++LAIGTA P + V+Q+ YPDYYFR T +E  T+LK+KFKR+C++S IKKR+MYLTEEILK+NP +CA++  PSLD RQ ++ VEVP+LGKEAA KAI+EWGQPKS+ITHLIFCTT+  D+PGAD+++ KL+GL PSVKR  ++Q GCFAGGTVLRLAKDLAENN+GARVLVVCSE TAVTFRGP++THLD LVG AL  DGAAA+
Sbjct:    9 LEAFRKSQRADGFASILAIGTANPPNVVDQSTYPDYYFRNTNNEDNTDLKDKFKRICERSAIKKRHMYLTEEILKKNPELCAFLEVPSLDTRQAMLAVEVPRLGKEAAEKAIEEWGQPKSRITHLIFCTTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRLAKDLAENNRGARVLVVCSENTAVTFRGPSETHLDGLVGLALFGDGAAAL 228          
BLAST of FC876222 vs. ExPASy Swiss-Prot
Match: DPS1_PINST (Pinosylvin synthase 1 OS=Pinus strobus GN=STS1 PE=1 SV=1)

HSP 1 Score: 313.153 bits (801), Expect = 9.241e-85
Identity = 150/220 (68.18%), Postives = 188/220 (85.45%), Query Frame = 1
Query:   64 VQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYM-APSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLPPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALXRDGAAAV 720
            ++  R +QRADG A++LAIGTA P + V+Q+ YPDYYFR+T +E  T+LK+KFKR+C++S IKKR+MYLTEEILK+NP +CA++  PSLD RQ ++  EVP+LGKEAA KAI+EWGQPKS+ITHLIFCTT+  D+PGAD+++ KL+GL PSVKR  ++Q GCFAGGTVLRLAKDLAENN+GARVLVVCSE TAVTFRGP++THLD LVG AL  DGA+A+
Sbjct:    9 LEAFRKSQRADGFASILAIGTANPPNVVDQSTYPDYYFRVTNNEDNTDLKDKFKRICERSAIKKRHMYLTEEILKKNPELCAFLEVPSLDTRQAMLAAEVPRLGKEAAEKAIEEWGQPKSRITHLIFCTTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRLAKDLAENNRGARVLVVCSENTAVTFRGPSETHLDGLVGLALFGDGASAL 228          
BLAST of FC876222 vs. ExPASy Swiss-Prot
Match: DPSS_PINSY (Dihydropinosylvin synthase OS=Pinus sylvestris PE=1 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.207e-84
Identity = 150/216 (69.44%), Postives = 189/216 (87.50%), Query Frame = 1
Query:   76 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYM-APSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLPPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALXRDGAAAV 720
            R  QRADG A++LAIGTA P ++V+Q+ YPD+YFRIT +EH TELK+KFKR+C++S IK+RYMYLTEEILK+NP++CA++  PSLDARQ ++ +EVP+L KEAA KAI+EWGQ KS ITHLIFC+T+  D+PGAD+++ KL+GL PSVKR  ++Q GCFAGGTVLR+AKDLAENN+GARVLV+CSE TAVTFRGP++THLDSLVGQAL  DGA+A+
Sbjct:   10 RKLQRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASAL 225          
BLAST of FC876222 vs. ExPASy Swiss-Prot
Match: CHSY_PERAE (Chalcone synthase OS=Persea americana GN=CHS PE=2 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 1.022e-83
Identity = 159/223 (71.30%), Postives = 177/223 (79.37%), Query Frame = 1
Query:   55 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYY-FRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLPPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALXRDGAAAV 720
            M  V+ IR  QRA+GPAT++AIGT+TP ++V+Q++YPDYY F    +      +  FKRMC+KSMIKKRYMYLTE   K            L ARQD+VVVEVPKLGKE   KAIK  GQPKSKI  L+FCTTSGVDMPGADYQLTK+ GLPPSVKR MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP+DTHLDSLVGQAL  DGAAA+
Sbjct:    1 MVNVEAIRKVQRAEGPATIMAIGTSTPPNAVDQSEYPDYYYFGSPTASTRPSSRRSFKRMCEKSMIKKRYMYLTETYWKRIQMFVPTWLLPLKARQDMVVVEVPKLGKEVQPKAIKGMGQPKSKINPLVFCTTSGVDMPGADYQLTKVFGLPPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAL 223          
BLAST of FC876222 vs. ExPASy Swiss-Prot
Match: CHSA_IPOPL (Chalcone synthase A (Fragment) OS=Ipomoea platensis GN=CHSA PE=2 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 4.746e-81
Identity = 147/215 (68.37%), Postives = 177/215 (82.33%), Query Frame = 1
Query:   76 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLPPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALXRDGAAAV 720
            R A+R +G A +LA+GTATPA+ V+Q  YPD+YFRIT SEH+ E KEKF+R+C+KS I+KR++ LTEE+LK+NPN+C Y   SL+ RQD +V EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLTKL+GL  SVKR MMYQQGC AG  +LRLAKDLAENNKGARVLVVCSE+T   FRGP+    D+L+ Q L  DG+AAV
Sbjct:   12 RRAKRFEGHAKILAVGTATPANWVDQTTYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHLVLTEELLKKNPNLCTYNETSLNTRQDTLVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNISVKRLMMYQQGCNAGAAMLRLAKDLAENNKGARVLVVCSEVTLSVFRGPSLQQEDNLLAQCLFGDGSAAV 226          
BLAST of FC876222 vs. ExPASy Swiss-Prot
Match: CHSB_IPOPU (Chalcone synthase B OS=Ipomoea purpurea GN=CHSB PE=3 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 5.247e-80
Identity = 146/215 (67.91%), Postives = 176/215 (81.86%), Query Frame = 1
Query:   76 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLPPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALXRDGAAAV 720
            R A+R +G A +LAIGTATPA  V+Q  YPD+YFRIT S+H+ E KEKF+R+C+KS I+KR++ LTEE+LK+NPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLTKL+GL  SVKR MMYQQGC AG  +LRLAKDLAE+NKG RVLVVC+EIT   FRGP+    D+L+ Q L  DGAAA+
Sbjct:   14 RRAKRLEGDAKILAIGTATPASWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSKIRKRHLVLTEELLKKNPNLCTYNETSLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDLAESNKGGRVLVVCAEITINIFRGPSLEQDDNLLAQCLFGDGAAAM 228          
BLAST of FC876222 vs. ExPASy Swiss-Prot
Match: CHSA_IPOPU (Chalcone synthase A OS=Ipomoea purpurea GN=CHSA PE=3 SV=2)

HSP 1 Score: 296.975 bits (759), Expect = 6.853e-80
Identity = 145/213 (68.08%), Postives = 174/213 (81.69%), Query Frame = 1
Query:   82 AQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLPPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALXRDGAAAV 720
            A+R +G A +LAIGTATPA+ V+Q  YPD+YFRIT SEH+ E KEKF+R+C+KS I KR++ +TEE+LK+NPN+C Y   SL+ RQDI+V EVPKLGK+AA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLTKL+GL  SVKR MMYQQGC AG  +LRLAKDLAENNKG RVLVVCSE+    FRGP+    D+L+ Q L  DGAAAV
Sbjct:   16 AKRLEGDAKILAIGTATPANWVDQTTYPDFYFRITNSEHLLEHKEKFRRICNKSKIMKRHLVITEELLKKNPNLCTYNEASLNTRQDILVSEVPKLGKDAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDLAENNKGGRVLVVCSEVMLSVFRGPSLQQEDNLLAQCLFGDGAAAV 228          
BLAST of FC876222 vs. ExPASy Swiss-Prot
Match: CHSA_IPOTF (Chalcone synthase A (Fragment) OS=Ipomoea trifida GN=CHSA PE=3 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 1.169e-79
Identity = 150/222 (67.57%), Postives = 181/222 (81.53%), Query Frame = 1
Query:   58 ATVQEIRN-AQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLPPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALXRDGAAAV 720
            ATVQ   + A+R +G A +LAIGTATP + V+QA YPD+YFRIT SEH+ E KEKF+R+C+KS I+KR++ LT+E+LK+NPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLTKL+GL  SVKR MMYQQGC AG  +LRL KDLAENNKGARVLVVCSEIT   FRGP+    D+L+ Q L  DG+AA+
Sbjct:    5 ATVQLTDDTAKRFEGHAKLLAIGTATPTNWVDQATYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHLVLTKELLKKNPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLVKDLAENNKGARVLVVCSEITINIFRGPSLEQDDNLLAQCLFGDGSAAM 226          
BLAST of FC876222 vs. ExPASy Swiss-Prot
Match: CHSB_IPOCO (Chalcone synthase B (Fragment) OS=Ipomoea cordatotriloba GN=CHSB PE=3 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 1.527e-79
Identity = 144/215 (66.98%), Postives = 176/215 (81.86%), Query Frame = 1
Query:   76 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLPPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALXRDGAAAV 720
            R  +R +G A +LAIGTATPA+ V+Q  YPD+YFRIT S+H+ + KEKF+R+C+KS I+KR+M LTEE+LK+NPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLTKL+GL  SVKR MMYQQGC AG  +LRLAKD+AENNKGARVLVVCSE+    FRGP+    D+L+ Q L  DG+AA+
Sbjct:   14 RREKRFEGHAKILAIGTATPANWVDQTTYPDFYFRITNSQHLLDHKEKFRRICNKSKIRKRHMILTEELLKKNPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDVAENNKGARVLVVCSEVMLSVFRGPSLQQEDNLLAQCLFGDGSAAL 228          
The following BLAST results are available for this feature:
BLAST of FC876222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHSB_PETHY2.350e-8871.36Chalcone synthase B OS=Petunia hybrida GN=CHSB PE=... [more]
DPS2_PINST7.075e-8569.09Pinosylvin synthase 2 OS=Pinus strobus GN=STS2 PE=... [more]
DPS1_PINST9.241e-8568.18Pinosylvin synthase 1 OS=Pinus strobus GN=STS1 PE=... [more]
DPSS_PINSY1.207e-8469.44Dihydropinosylvin synthase OS=Pinus sylvestris PE=... [more]
CHSY_PERAE1.022e-8371.30Chalcone synthase OS=Persea americana GN=CHS PE=2 ... [more]
CHSA_IPOPL4.746e-8168.37Chalcone synthase A (Fragment) OS=Ipomoea platensi... [more]
CHSB_IPOPU5.247e-8067.91Chalcone synthase B OS=Ipomoea purpurea GN=CHSB PE... [more]
CHSA_IPOPU6.853e-8068.08Chalcone synthase A OS=Ipomoea purpurea GN=CHSA PE... [more]
CHSA_IPOTF1.169e-7967.57Chalcone synthase A (Fragment) OS=Ipomoea trifida ... [more]
CHSB_IPOCO1.527e-7966.98Chalcone synthase B (Fragment) OS=Ipomoea cordatot... [more]

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Properties
Property NameValue
Genbank descriptionC32001H10EF DevOvary1 Citrus clementina cDNA clone C32001H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876222 ID=FC876222; Name=FC876222; organism=Citrus clementina; type=EST; length=721bp
GGCACACTCACCAAGCACGAGCCACAAACATATTCATTAAGGGTTCAACT
TGAAATGGCAACCGTTCAAGAGATCAGAAACGCTCAGCGTGCCGACGGCC
CGGCCACCGTCCTCGCCATCGGTACGGCCACGCCTGCCCACAGTGTCAAC
CAGGCTGATTATCCCGACTATTACTTCAGGATCACAAAGAGCGAGCATAT
GACGGAGCTTAAAGAGAAGTTCAAGCGCATGTGTGACAAGTCGATGATTA
AGAAGCGTTACATGTACTTAACGGAAGAGATTTTGAAGGAAAACCCCAAC
ATGTGCGCTTACATGGCTCCATCACTCGACGCACGTCAAGACATTGTGGT
GGTCGAAGTGCCGAAGCTCGGGAAAGAAGCTGCTACAAAGGCCATCAAAG
AATGGGGCCAGCCCAAGTCTAAGATCACCCACCTCATCTTCTGCACCACC
TCCGGCGTCGACATGCCCGGCGCCGACTACCAGCTCACCAAACTGATCGG
CCTGCCCCCCTCCGTCAAGCGCTTCATGATGTACCAACAAGGATGTTTCG
CCGGTGGCACTGTTCTTCGCCTCGCTAAAGACTTGGCTGAGAACAACAAG
GGCGCTCGCGTTCTTGTTGTCTGTTCGGAGATCACGGCGGTCACTTTCCG
CGGCCCTGCCGATACTCATCTTGATTCTCTTGTGGGCCAGGCTTTGNTTC
GTGATGGTGCTGCTGCTGTGA
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