FC876224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_CRIGR (Glyceraldehyde-3-phosphate dehydrogenase OS=Cricetulus griseus GN=GAPDH PE=2 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 1.372e-33 Identity = 74/143 (51.75%), Postives = 94/143 (65.73%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 509 VK+G+NGFGRIGRLV R VE+VA+NDPFI +YM YM +YDS HG++K +K ++ K ++ G K +T+F R+P I W + GAEYVVESTGVFT VIISAPS DAPMFV+GVN+ +Y L Sbjct: 2 VKVGVNGFGRIGRLVTRAAFTSGKVEVVAINDPFIDLNYMVYMFQYDSTHGKFKG-TVKAENGKLVING-KAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNQDKYDNSL 142
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_CHICK (Glyceraldehyde-3-phosphate dehydrogenase OS=Gallus gallus GN=GAPDH PE=2 SV=3) HSP 1 Score: 142.124 bits (357), Expect = 1.372e-33 Identity = 74/143 (51.75%), Postives = 93/143 (65.03%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 509 VK+G+NGFGRIGRLV R + V++VA+NDPFI +YM YM KYDS HG +K +K ++ K ++ G +T+F R+P I WA+ GAEYVVESTGVFT VIISAPS DAPMFV+GVN +Y L Sbjct: 2 VKVGVNGFGRIGRLVTRAAVLSGKVQVVAINDPFIDLNYMVYMFKYDSTHGHFKG-TVKAENGKLVINGHA-ITIFQERDPSNIKWADAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYDKSL 142
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_DANRE (Glyceraldehyde-3-phosphate dehydrogenase OS=Danio rerio GN=gapdh PE=2 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 1.792e-33 Identity = 75/143 (52.45%), Postives = 91/143 (63.64%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 509 VK+GINGFGRIGRLV R VE+VA+NDPFI DYM YM +YDS HG++K E+K + K ++ G +TV+ R+P I W + GA YVVESTGVFT VIISAPS DAPMFV+GVN +Y L Sbjct: 2 VKVGINGFGRIGRLVTRAAFLTKKVEIVAINDPFIDLDYMVYMFQYDSTHGKYK-GEVKAEGGKLVIDGH-AITVYSERDPANIKWGDAGATYVVESTGVFTTIEKASAHIKGGAKRVIISAPSADAPMFVMGVNHEKYDNSL 142
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_RABIT (Glyceraldehyde-3-phosphate dehydrogenase OS=Oryctolagus cuniculus GN=GAPDH PE=1 SV=3) HSP 1 Score: 141.354 bits (355), Expect = 2.340e-33 Identity = 73/143 (51.05%), Postives = 92/143 (64.34%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 509 VK+G+NGFGRIGRLV R V++VA+NDPFI YM YM +YDS HG++ H +K ++ K ++ G K +T+F R+P I W + GAEYVVESTGVFT VIISAPS DAPMFV+GVN +Y L Sbjct: 2 VKVGVNGFGRIGRLVTRAAFNSGKVDVVAINDPFIDLHYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYDNSL 142
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_MONAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Monascus anka GN=GPD1 PE=3 SV=3) HSP 1 Score: 141.354 bits (355), Expect = 2.340e-33 Identity = 71/142 (50.00%), Postives = 92/142 (64.79%), Query Frame = 3 Query: 84 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 509 K+GINGFGRIGR+V R ++ + V++VAVNDPFI Y YM KYDS HG++ + D TL+ K + + R+P +IPW+ETGAEYVVESTGVFT VIISAPS D+PMFV+GVN +Y ++ Sbjct: 5 KVGINGFGRIGRIVFRNAIEHEGVDIVAVNDPFIEVHYAAYMLKYDSTHGRF--NGTVEFDGNTLIVNGKKIKFYAERDPAQIPWSETGAEYVVESTGVFTKQEKASLHLKGGAKKVIISAPSSDSPMFVMGVNNDQYTKDI 144
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3PC_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Chlamydomonas reinhardtii GN=GAPC PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.340e-33 Identity = 72/143 (50.35%), Postives = 88/143 (61.54%), Query Frame = 3 Query: 75 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKP 503 GK+KIGINGFGRIGRLV R + R D+E+VA+NDPFI +YM YM KYDSVH W H KD L + + F +P +I W GA+ V+ESTGVFT VII+APS DAPM+V+GVN +Y P Sbjct: 3 GKIKIGINGFGRIGRLVMRATMLRPDIEVVAINDPFIDAEYMAYMFKYDSVHKTWPGHVNGSKDG--FLVEGRKIHTFTESDPSKINWGAAGADIVIESTGVFTDIAKATAHLTGGAKKVIITAPSNDAPMYVMGVNHEKYNP 143
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_SPECI (Glyceraldehyde-3-phosphate dehydrogenase OS=Spermophilus citellus GN=GAPDH PE=2 SV=3) HSP 1 Score: 140.969 bits (354), Expect = 3.056e-33 Identity = 72/143 (50.35%), Postives = 93/143 (65.03%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 509 VK+G+NGFGRIGRLV R V++VA+NDPFI +YM YM +YDS HG++ H +K ++ K ++ G K +++F R+P I W + GAEYVVESTGVFT VIISAPS DAPMFV+GVN +Y L Sbjct: 2 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KSISIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYDNSL 142
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_MUSPF (Glyceraldehyde-3-phosphate dehydrogenase OS=Mustela putorius furo GN=GAPDH PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.056e-33 Identity = 72/143 (50.35%), Postives = 93/143 (65.03%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 509 VK+G+NGFGRIGRLV R V++VA+NDPFI +YM YM +YDS HG++ H +K ++ K ++ G K +++F R+P I W + GAEYVVESTGVFT VIISAPS DAPMFV+GVN +Y L Sbjct: 2 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KSISIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYDNSL 142
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_HOMAM (Glyceraldehyde-3-phosphate dehydrogenase OS=Homarus americanus PE=1 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 3.056e-33 Identity = 76/142 (53.52%), Postives = 94/142 (66.20%), Query Frame = 3 Query: 84 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 509 KIGINGFGRIGRLV R L ++VAVNDPFI +YM YM KYDS HG +K E+K++D ++ G+K +TVF PE IPW++ GAEY+VESTGVFT V+ISAPS DAPMFV GVN +Y ++ Sbjct: 2 KIGINGFGRIGRLVLRAALSCG-AQVVAVNDPFIALEYMVYMFKYDSTHGVFKG-EVKMEDGALVVDGKK-ITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVVISAPSADAPMFVCGVNLEKYSKDM 140
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_COLLI (Glyceraldehyde-3-phosphate dehydrogenase OS=Columba livia GN=GAPDH PE=2 SV=3) HSP 1 Score: 140.969 bits (354), Expect = 3.056e-33 Identity = 73/143 (51.05%), Postives = 93/143 (65.03%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 509 VK+G+NGFGRIGRLV R + V++VA+NDPFI +YM YM KYDS HG ++ +K ++ K ++ G +T+F R+P I WA+ GAEYVVESTGVFT VIISAPS DAPMFV+GVN +Y L Sbjct: 2 VKVGVNGFGRIGRLVTRAAILSAKVQVVAINDPFIDLNYMVYMFKYDSTHGHFRG-TVKAENGKLVINGNA-ITIFQERDPSNIKWADAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYDKSL 142 The following BLAST results are available for this feature:
BLAST of FC876224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 307
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876224 ID=FC876224; Name=FC876224; organism=Citrus clementina; type=EST; length=509bpback to top |