FC876226
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876226 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 182.956 bits (463), Expect = 7.597e-46 Identity = 87/144 (60.42%), Postives = 101/144 (70.14%), Query Frame = 1 Query: 106 SLFATANAKIPGVFAGGP---WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPV 522 S A A + AGG W A ATFYGGSD SGTMGGACGYGNLY QGYGV+ AALS ALFN+G SCG C+ + C PQWC G A+ +TATN CPPN+A PSD GGWCNPPRPHFD++ P + ++ Y+AGIVPV Sbjct: 7 SRLALCLAVVAACAAGGAVADWSPATATFYGGSDGSGTMGGACGYGNLYDQGYGVDNAALSQALFNDGASCGQCYLIVCDTSRAPQWCKAGT-AVTVTATNLCPPNWALPSDGGGWCNPPRPHFDMSQPAWEQIGVYQAGIVPV 149
BLAST of FC876226 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 7.597e-46 Identity = 87/154 (56.49%), Postives = 110/154 (71.43%), Query Frame = 1 Query: 79 MLCFFSVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKC----GGDPQWCNP--GNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPV 522 +L S++ SL +++ A A G W AHATFYGG+DASGTMGGACGYGN Y QGYG +TAALS +F +GLSCGACFEL+C GGD + C P +I++TAT+ CP N A P D GGWCNPP HFDL+ P FL++A++++GIVPV Sbjct: 9 LLVLLSLSSSLSSSSAA------AAGRWTDAHATFYGGADASGTMGGACGYGNTYGQGYGTDTAALSAVMFGDGLSCGACFELRCGGGGGGDRRGCLPPAAGKSIVVTATDLCPANHALPGDRGGWCNPPLHHFDLSQPAFLRIARFQSGIVPV 156
BLAST of FC876226 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 1.296e-45 Identity = 83/147 (56.46%), Postives = 101/147 (68.71%), Query Frame = 1 Query: 91 FSVALSLFATANAKIP---GVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPV 522 F VAL+ A K+ G F GPW+ AHATFYGG D SGT+ GACGY + +GYGV T A+ST LF G CGAC+E+KC P C G +++TATN CPPN Q +DNGGWCNPPR HFDL+MP FL++AQ +AGIVP+ Sbjct: 16 FLVALAAGDAAPPKVHRNHGKFTAGPWKQAHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPI 162
BLAST of FC876226 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 182.185 bits (461), Expect = 1.296e-45 Identity = 80/123 (65.04%), Postives = 96/123 (78.05%), Query Frame = 1 Query: 160 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKC--GGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPV 522 W ATFYGG+DASGTMGGACGYGNLY+ GYG NTAALS+ LFN+G SCG C+ + C PQWC G A+ ITATN CPPN+A PS++GGWCNPPRPHFD+A P +L++ Y+AGI+PV Sbjct: 27 WNKGTATFYGGADASGTMGGACGYGNLYTAGYGTNTAALSSVLFNDGWSCGQCYLIMCDAAATPQWCRAG-AAVTITATNLCPPNWALPSNSGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPV 148
BLAST of FC876226 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 1.296e-45 Identity = 88/151 (58.28%), Postives = 105/151 (69.54%), Query Frame = 1 Query: 76 RMLCFFSVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKC--GGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPV 522 + L +V +LF +A P G HATFYGGSDASGTMGGACGYG+LYS GYG TAALSTALFN+G SCG C+ + C D +WC G +++ITATNFCPPNFA P++NGGWCNPP HFD+A P + K+ YR GIVPV Sbjct: 3 KSLAGLAVLAALFIAVDAFRPSGLTNG-----HATFYGGSDASGTMGGACGYGDLYSAGYGTMTAALSTALFNDGASCGECYRITCDHAADSRWCLKG-ASVVITATNFCPPNFALPNNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPV 147
BLAST of FC876226 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 177.948 bits (450), Expect = 2.444e-44 Identity = 79/123 (64.23%), Postives = 95/123 (77.24%), Query Frame = 1 Query: 160 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCG--GDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPV 522 W S ATFYGGSDASGTMGGACGYGNLY GYG NTAALS+ALFN+G SCG C+++ C +P+WC G + IT TN CPPN+A S++GGWCNPPR HFD+A P +L++ Y+AGIVPV Sbjct: 32 WSSGTATFYGGSDASGTMGGACGYGNLYWSGYGTNTAALSSALFNDGASCGQCYQIACDHQAEPRWCLQGR-TVTITGTNLCPPNYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPV 153
BLAST of FC876226 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 4.168e-44 Identity = 78/121 (64.46%), Postives = 94/121 (77.69%), Query Frame = 1 Query: 163 QSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCG-GDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPV 522 QSA ATFYGG D SGTMGGACGYGNLY+ GYG+ AALS+ALFN+G CGAC+ + C +WC PG +I ITATN CPPN+A PS++GGWCNPPR HFD++ P + +A Y+AGIVPV Sbjct: 29 QSAFATFYGGKDGSGTMGGACGYGNLYNAGYGLYNAALSSALFNDGAMCGACYTITCDTSQTKWCKPGGNSITITATNLCPPNWALPSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPV 149
BLAST of FC876226 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 5.444e-44 Identity = 81/128 (63.28%), Postives = 94/128 (73.44%), Query Frame = 1 Query: 145 FAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCG--GDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPV 522 F W A ATFYGGSDASGTMGGACGYG+LYS GYG NTAALST LFN+G SCG C+ + C D ++C G ++ ITATN CPPN+A P+D GGWCNPPR HFD+A P +LK+ Y GIVPV Sbjct: 29 FTASGWNKAFATFYGGSDASGTMGGACGYGDLYSTGYGTNTAALSTVLFNDGASCGQCYRIMCDYQADRRFCISGT-SVTITATNLCPPNYALPNDAGGWCNPPRQHFDMAEPAWLKIGVYVGGIVPV 155
BLAST of FC876226 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 176.022 bits (445), Expect = 9.286e-44 Identity = 82/142 (57.75%), Postives = 99/142 (69.72%), Query Frame = 1 Query: 103 LSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDP--QWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPV 522 L + T A + A W A ATFYGG+D SGTMGGACGYGNLY QGYG+ AALSTALFN+G +CG C+ + C D +WC P A+ +TATN CPPN+A PSD GGWCNPPR HFD++ P + ++ YRAGIVPV Sbjct: 8 LLVLCTILAARMALAAADDWIPATATFYGGNDGSGTMGGACGYGNLYDQGYGLENAALSTALFNDGAACGQCYLIVCDTDKAGRWCKP-RGAVTVTATNLCPPNWALPSDGGGWCNPPRRHFDMSQPAWERIGVYRAGIVPV 148
BLAST of FC876226 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.213e-43 Identity = 78/122 (63.93%), Postives = 93/122 (76.23%), Query Frame = 1 Query: 160 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCG-GDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPV 522 W A ATFYGGSD +GTMGGACGYGNLY+ GYG+N AALS+ALFN+G CGAC+ + C WC PG +I ITATN CPPN+A+ SD GGWCNPPR HFD++ P + +A Y+AGIVPV Sbjct: 23 WTPATATFYGGSDGAGTMGGACGYGNLYNAGYGLNNAALSSALFNDGAMCGACYTIACDTSQSTWCKPGT-SITITATNLCPPNYAKKSDAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPV 143 The following BLAST results are available for this feature:
BLAST of FC876226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876226 ID=FC876226; Name=FC876226; organism=Citrus clementina; type=EST; length=522bpback to top |