FC876226
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876226 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.213e-43 Identity = 83/147 (56.46%), Postives = 105/147 (71.43%), Query Frame = 1 Query: 85 CFFSVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCG-GDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPV 522 C +VA + ATA A S ATFYGGSDASGTMGGACGYGNLYS GYG NTAALS+ALFN+G +CG C+++ C + +WC G ++ ITATN CPP++++PS++GGWCNPPR HFD+A P + ++ YR GIVPV Sbjct: 10 CVAAVAACIAATAAAL-----------SGTATFYGGSDASGTMGGACGYGNLYSTGYGTNTAALSSALFNDGAACGECYQITCDQSNSKWCKAGT-SVTITATNLCPPDYSKPSNDGGWCNPPRQHFDMAQPAWEQIGVYRGGIVPV 144
BLAST of FC876226 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 6.019e-43 Identity = 82/145 (56.55%), Postives = 101/145 (69.66%), Query Frame = 1 Query: 94 SVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSD--NGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPV 522 +V +SL A A + F W AHATFYG AS TMGGACGYGNLY+ GYG +TAALST LF +G CG C++++C G C G+PAI +TATN CPPN+A+ D GGWCNPPR HFDL+ P F+++A +RAGIVPV Sbjct: 16 AVIISL-AGAATTVDAKFRAMQWTPAHATFYGDETASETMGGACGYGNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCVGTAS-CYRGSPAITVTATNLCPPNWAEDPDRGGGGWCNPPRAHFDLSKPAFMRMADWRAGIVPV 158
BLAST of FC876226 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 1.027e-42 Identity = 77/121 (63.64%), Postives = 93/121 (76.86%), Query Frame = 1 Query: 160 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPV 522 W ATFYG + T GACGYG+L+ QGYG+ TAALSTALFNNG CGAC+E+ C PQWC PG +I ITATNFCPP+F +P+DN WCNPP+ HFDL+ PMFLK+A+Y+AG+VPV Sbjct: 90 WGHGRATFYGDINGGETQQGACGYGDLHKQGYGLETAALSTALFNNGSRCGACYEIMCEHAPQWCLPG--SIKITATNFCPPDFTKPNDN--WCNPPQKHFDLSQPMFLKIAKYKAGVVPV 206
BLAST of FC876226 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2) HSP 1 Score: 169.859 bits (429), Expect = 6.655e-42 Identity = 74/121 (61.16%), Postives = 93/121 (76.86%), Query Frame = 1 Query: 160 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPV 522 W A ATFYG T GACGYG+L+ QGYG+ TAALSTALFN G +CGAC+++ C DPQWC PG ++ ITATNFCPP++++ G WCNPP+ HFDL++PMFLK+AQY+AG+VPV Sbjct: 48 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPG--SVKITATNFCPPDYSK--TEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPV 164
BLAST of FC876226 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 8.692e-42 Identity = 74/126 (58.73%), Postives = 94/126 (74.60%), Query Frame = 1 Query: 148 AGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDP-QWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPV 522 A W SA ATFYGGSDASGTMGG+CGYGN+YS GYG NT ALS+AL+ +G SCGAC+ + C +WC G ++ +TATN+CPPN+++ D GGWCNPPR HFD++ P + +A Y +GIVPV Sbjct: 23 AAQQWTSATATFYGGSDASGTMGGSCGYGNMYSAGYGTNTTALSSALYGDGASCGACYLVTCDASATRWCKNGT-SVTVTATNYCPPNYSESGDAGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPV 147
BLAST of FC876226 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 169.088 bits (427), Expect = 1.135e-41 Identity = 75/121 (61.98%), Postives = 92/121 (76.03%), Query Frame = 1 Query: 160 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPV 522 W A ATFYG T GACGYG+L+ QGYG+ TAALSTALFN G +CGAC+++ C DPQWC PG I ITATNFCPP++++ G WCNPP+ HFDL++PMFLK+AQY+AG+VPV Sbjct: 55 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVHDPQWCLPG--TIKITATNFCPPDYSK--TEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPV 171
BLAST of FC876226 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 5.634e-41 Identity = 74/121 (61.16%), Postives = 93/121 (76.86%), Query Frame = 1 Query: 160 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPV 522 W A ATFYG T GACGYGNL+ QGYG+ TAALSTALFN+G +CGAC+E+ C DPQWC PG ++ ITATNFCP N+++ +D WCNPP+ HFDL++ MFLK+A+Y+AG+VPV Sbjct: 58 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPG--SVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPV 174
BLAST of FC876226 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 5.634e-41 Identity = 74/121 (61.16%), Postives = 93/121 (76.86%), Query Frame = 1 Query: 160 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPV 522 W A ATFYG T GACGYGNL+ QGYG+ TAALSTALFN+G +CGAC+E+ C DPQWC PG ++ ITATNFCP N+++ +D WCNPP+ HFDL++ MFLK+A+Y+AG+VPV Sbjct: 52 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPG--SVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPV 168
BLAST of FC876226 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 1.534e-38 Identity = 74/123 (60.16%), Postives = 85/123 (69.11%), Query Frame = 1 Query: 160 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPV 522 W ATFYGG+D SGTMGGACGYGNLY QGYG+N AALST LFNNG SCG C+ + C D P C G AI +T TNFCPPN+ P GGWCN RPHFD++ P + + Y AGIVP+ Sbjct: 23 WLQGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNNGASCGQCYLIICNYDKAPSGCRMGT-AITVTGTNFCPPNYDLP--YGGWCNTTRPHFDMSQPAWENIGIYSAGIVPI 142
BLAST of FC876226 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 3.418e-38 Identity = 72/127 (56.69%), Postives = 86/127 (67.72%), Query Frame = 1 Query: 148 AGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKC--GGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPV 522 A W ATFYGG+D SGTMGGACGYGNLY QGYG+N AALST LFN+G SCG C+ + C P WC G AI +T TN+CPPN+ P GGWCN RPHFD++ P + + Y AGI+P+ Sbjct: 19 ARSDWLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGK-AITVTGTNYCPPNYDLP--YGGWCNATRPHFDMSQPAWENIGIYNAGIIPI 142 The following BLAST results are available for this feature:
BLAST of FC876226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876226 ID=FC876226; Name=FC876226; organism=Citrus clementina; type=EST; length=522bpback to top |