FC876322

Overview
NameFC876322
Unique NameFC876322
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length651
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9403 contig Ccv1_Contig9403:559..1209. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876322 vs. ExPASy Swiss-Prot
Match: ANKR2_HUMAN (Ankyrin repeat domain-containing protein 2 OS=Homo sapiens GN=ANKRD2 PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 4.351e-11
Identity = 57/189 (30.16%), Postives = 95/189 (50.26%), Query Frame = 1
Query:   13 SCDSSNTSPLYSAAVQDHLDVVNTILDADVSCTRIVRKNGKTALHTAARYGLINIVTALIVRDPEIVTIKDKKGQTALHMAVKGQCPSVVEDILSADHLILNERDKKGNTAVHIATRKCRPQIVSLLLSYTSIDVNAINNQRETAMDLADKLQYGDSTLEIKEALAEAGAKHARYVGQVDEAMELKRTV 579
            +CD    + L+ A+++ H++++  +LD   +     R +  TA+H A R G + +V  L     +   ++DK   T LH+AV+     +VE  LS   L +N RD++G+TA+H A R  R +I+ LLL +   D+   N   +T  DL  +L   D+   ++    E GA+H    G  D   E  + V
Sbjct:  176 TCDQFRRTALHRASLEGHMEILEKLLDNGATVDFQDRLDC-TAMHWACRGGHLEVVKLLQSHGAD-TNVRDKLLSTPLHVAVRTGQVEIVEHFLSLG-LEINARDREGDTALHDAVRLNRYKIIKLLLLH-GADMMTKNLAGKTPTDLV-QLWQADTRHALEH--PEPGAEHNGLEGPNDSGRETPQPV 357          
BLAST of FC876322 vs. ExPASy Swiss-Prot
Match: ANKR1_HUMAN (Ankyrin repeat domain-containing protein 1 OS=Homo sapiens GN=ANKRD1 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.351e-11
Identity = 52/174 (29.89%), Postives = 96/174 (55.17%), Query Frame = 1
Query:   16 CDSSNTSPLYSAAVQDHLDVVNTILDADVSCT-RIVRKNGKTALHTAARYGLINIVTALIVRDPEIVTIKDKKGQTALHMAVKGQCPSVVEDILSADHLILNERDKKGNTAVHIATRKCRPQIVSLLLSYTSIDVNAINNQRETAMDLADKLQYGDSTLEIKEALAEAGAKHAR 534
            CD    + L+ A ++ HL +V  +++A      R + ++  TA+H A+R G ++++  L+ +  +I + +DK   TALH+AV+       E +++ +   LN +D++G+T +H A R  R +++ LL+ Y   D+N  N   +T MDL   L + + T  I ++L E   K +R
Sbjct:  149 CDEYKRTALHRACLEGHLAIVEKLMEAGAQIEFRDMLES--TAIHWASRGGNLDVLKLLLNKGAKI-SARDKLLSTALHVAVRTGHYECAEHLIACE-ADLNAKDREGDTPLHDAVRLNRYKMIRLLIMY-GADLNIKNCAGKTPMDLV--LHWQNGTKAIFDSLRENSYKTSR 315          
BLAST of FC876322 vs. ExPASy Swiss-Prot
Match: UACA_BOVIN (Uveal autoantigen with coiled-coil domains and ankyrin repeats protein OS=Bos taurus GN=UACA PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.682e-11
Identity = 58/199 (29.15%), Postives = 95/199 (47.74%), Query Frame = 1
Query:   19 DSSNTSPLYSAAVQDHLDVVNTILDADVSCTRIVRKNGKTALHTAARYGLINIVTALIVRDPEIVTIKDKKGQTALHMAVKGQCPSVVEDILSADH-LILNERDKKGNTAVHIATRKCRPQIVSLLLSYTSIDVNAINNQRETAM---------DLADKLQYGDSTLEIKEALAEAGAKHARYVGQVDEAMELKRTVSD 585
            D    S  +  A + +L+ +N IL   V  T      G+ ALH AA+YG    +  L+  +     + D +G+TALH A    CPS ++  L  DH   +N +D  G T + +AT+ CRP I  LL+     D+N+ + Q  TA+         D  + L    + + + +AL    + +AR +G   + + L +T S+
Sbjct:   52 DVEGRSAFHVVASKGNLECLNAILIHGVDITTSDTA-GRNALHLAAKYGHALCLQKLLQYNCPTEHV-DLQGRTALHDAAMADCPSSIQ--LLCDHGASVNAKDVDGRTPLVLATQMCRPTICQLLID-RGADINSRDKQNRTALMLGCEYGCKDAVEVLIKNGADVTLLDALGHDSSYYAR-IGDNLDILTLLKTASE 244          
The following BLAST results are available for this feature:
BLAST of FC876322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
ANKR2_HUMAN4.351e-1130.16Ankyrin repeat domain-containing protein 2 OS=Homo... [more]
ANKR1_HUMAN4.351e-1129.89Ankyrin repeat domain-containing protein 1 OS=Homo... [more]
UACA_BOVIN5.682e-1129.15Uveal autoantigen with coiled-coil domains and ank... [more]

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Properties
Property NameValue
Genbank descriptionC32003D04EF DevOvary1 Citrus clementina cDNA clone C32003D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876322 ID=FC876322; Name=FC876322; organism=Citrus clementina; type=EST; length=651bp
GAGCTATGTAAGTCCTGTGACTCCTCAAATACTAGCCCACTTTATTCGGC
AGCTGTGCAAGATCATTTGGATGTGGTGAATACCATCTTGGATGCTGATG
TCAGCTGCACGAGAATAGTTAGAAAAAATGGAAAAACAGCGCTGCATACT
GCTGCAAGGTATGGTCTCATTAATATAGTTACAGCTCTTATAGTCCGGGA
TCCAGAAATTGTCACAATTAAAGATAAGAAAGGTCAAACTGCACTCCATA
TGGCTGTAAAGGGTCAGTGTCCTTCAGTGGTAGAGGATATATTATCTGCT
GATCATTTAATACTAAATGAGCGCGACAAGAAGGGCAATACAGCGGTGCA
TATAGCTACAAGGAAATGCCGTCCTCAGATAGTATCCCTATTGCTAAGTT
ATACATCCATTGATGTCAACGCCATCAATAATCAGCGAGAAACTGCAATG
GATTTAGCAGACAAACTCCAGTATGGAGATTCTACACTGGAAATTAAGGA
AGCTCTTGCAGAGGCTGGTGCCAAGCATGCAAGATATGTTGGCCAGGTTG
ATGAAGCAATGGAACTTAAGAGGACTGTGAGTGACATTAAGCATGAAGTT
AGTGCACAACTCATACCAAATGAAAAAACCCACAGAAGAGTTTCTGGCAT
C
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