FC876324

Overview
NameFC876324
Unique NameFC876324
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length551
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9430 contig Ccv1_Contig9430:32..581. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876324 vs. ExPASy Swiss-Prot
Match: F16PA_XANCB (Fructose-1,6-bisphosphatase class 1 OS=Xanthomonas campestris pv. campestris (strain B100) GN=fbp PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.050e-11
Identity = 35/89 (39.33%), Postives = 53/89 (59.55%), Query Frame = 2
Query:  263 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKKLDVASNEVFSNCLRSSGRTGIIASEEED 529
            +LT +L++++ +G ID EL  +++ +S ACK+I+  V +  +  + G  G  NVQGE QKKLDV SN++        G     ASEE D
Sbjct:    5 SLTRFLIEEQHAGRIDPELRQLITIVSRACKRISIAVSKGALGGVLGDAGTGNVQGEAQKKLDVLSNDILLEANAWGGHLAACASEEMD 93          
BLAST of FC876324 vs. ExPASy Swiss-Prot
Match: F16PA_XANC8 (Fructose-1,6-bisphosphatase class 1 OS=Xanthomonas campestris pv. campestris (strain 8004) GN=fbp PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.050e-11
Identity = 35/89 (39.33%), Postives = 53/89 (59.55%), Query Frame = 2
Query:  263 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKKLDVASNEVFSNCLRSSGRTGIIASEEED 529
            +LT +L++++ +G ID EL  +++ +S ACK+I+  V +  +  + G  G  NVQGE QKKLDV SN++        G     ASEE D
Sbjct:    5 SLTRFLIEEQHAGRIDPELRQLITIVSRACKRISIAVSKGALGGVLGDAGTGNVQGEAQKKLDVLSNDILLEANAWGGHLAACASEEMD 93          
BLAST of FC876324 vs. ExPASy Swiss-Prot
Match: F16PA_PSEAE (Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas aeruginosa GN=fbp PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.984e-11
Identity = 35/94 (37.23%), Postives = 54/94 (57.45%), Query Frame = 2
Query:  263 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKKLDVASNEVFSNCLRSSGRTGIIASEEEDVPLAV 544
            TL+ +L++Q +S    A+L  ++  ++ ACK+I+  V +  +  + G  G  NVQGE QKKLDV SNE+       +G    +ASEE D P  +
Sbjct:    5 TLSRYLIEQTRSHNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVMSNEILLEANEWAGNLAGMASEEMDHPYQI 98          
BLAST of FC876324 vs. ExPASy Swiss-Prot
Match: F16PA_PSEAB (Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=fbp PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.984e-11
Identity = 35/94 (37.23%), Postives = 54/94 (57.45%), Query Frame = 2
Query:  263 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKKLDVASNEVFSNCLRSSGRTGIIASEEEDVPLAV 544
            TL+ +L++Q +S    A+L  ++  ++ ACK+I+  V +  +  + G  G  NVQGE QKKLDV SNE+       +G    +ASEE D P  +
Sbjct:    5 TLSRYLIEQTRSHNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVMSNEILLEANEWAGNLAGMASEEMDHPYQI 98          
BLAST of FC876324 vs. ExPASy Swiss-Prot
Match: F16PA_PSEA8 (Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas aeruginosa (strain LESB58) GN=fbp PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.984e-11
Identity = 35/94 (37.23%), Postives = 54/94 (57.45%), Query Frame = 2
Query:  263 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKKLDVASNEVFSNCLRSSGRTGIIASEEEDVPLAV 544
            TL+ +L++Q +S    A+L  ++  ++ ACK+I+  V +  +  + G  G  NVQGE QKKLDV SNE+       +G    +ASEE D P  +
Sbjct:    5 TLSRYLIEQTRSHNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVMSNEILLEANEWAGNLAGMASEEMDHPYQI 98          
BLAST of FC876324 vs. ExPASy Swiss-Prot
Match: F16PA_PSEA7 (Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas aeruginosa (strain PA7) GN=fbp PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.984e-11
Identity = 35/94 (37.23%), Postives = 54/94 (57.45%), Query Frame = 2
Query:  263 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKKLDVASNEVFSNCLRSSGRTGIIASEEEDVPLAV 544
            TL+ +L++Q +S    A+L  ++  ++ ACK+I+  V +  +  + G  G  NVQGE QKKLDV SNE+       +G    +ASEE D P  +
Sbjct:    5 TLSRYLIEQTRSHNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVMSNEILLEANEWAGNLAGMASEEMDHPYQI 98          
BLAST of FC876324 vs. ExPASy Swiss-Prot
Match: F16A1_LEPCP (Fructose-1,6-bisphosphatase class 1 1 OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=fbp1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.984e-11
Identity = 37/90 (41.11%), Postives = 55/90 (61.11%), Query Frame = 2
Query:  263 TLTNWLLKQE-QSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKKLDVASNEVFSNCLRSSGRTGIIASEEED 529
            +LT +L++Q+ Q G I A+L +++  ++ ACK+IA  V +  +  + G  G+ NVQGE QKKLD+ SNEV        G    +ASEE D
Sbjct:    6 SLTQFLVEQQRQHGRIPAQLRLLIEVVARACKRIAISVNKGALGEVLGSAGSENVQGEVQKKLDIISNEVLIEANEWGGHLAAMASEEMD 95          
BLAST of FC876324 vs. ExPASy Swiss-Prot
Match: F16A1_DECAR (Fructose-1,6-bisphosphatase class 1 1 OS=Dechloromonas aromatica (strain RCB) GN=fbp1 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.203e-11
Identity = 34/92 (36.96%), Postives = 57/92 (61.96%), Query Frame = 2
Query:  263 TLTNWLLKQEQS-GVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKKLDVASNEVFSNCLRSSGRTGIIASEEEDVP 535
            TL  +L +++++ GVI  +L +++  +S AC+ I+  + + G+  + G  G+ NVQGE QKKLDV SN++  +     G    +ASEE D+P
Sbjct:    6 TLARYLTEEQRNKGVITGDLKLLIEVVSRACQAISIAIGKGGLGGVLGEAGSDNVQGEAQKKLDVLSNDILLDANEWGGHLAAMASEEMDLP 97          
BLAST of FC876324 vs. ExPASy Swiss-Prot
Match: F16P_YEAST (Fructose-1,6-bisphosphatase OS=Saccharomyces cerevisiae GN=FBP1 PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 6.795e-11
Identity = 34/93 (36.56%), Postives = 60/93 (64.52%), Query Frame = 2
Query:  254 EIETLTNWLLK-QEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKKLDVASNEVFSNCLRSSGRTGIIASEEED 529
            +I TL  ++++ Q+Q      + T+VL+++  A K ++  ++RA + NL G+ GA N  G+ QKKLDV  +E+F N +R+SG   ++ SEE++
Sbjct:   19 DIITLPRFIIEHQKQFKNATGDFTLVLNALQFAFKFVSHTIRRAELVNLVGLAGASNFTGDQQKKLDVLGDEIFINAMRASGIIKVLVSEEQE 111          
BLAST of FC876324 vs. ExPASy Swiss-Prot
Match: F16PA_HAHCH (Fructose-1,6-bisphosphatase class 1 OS=Hahella chejuensis (strain KCTC 2396) GN=fbp PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.795e-11
Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = 2
Query:  257 IETLTNWLL-KQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKKLDVASNEVFSNCLRSSGRTGIIASEEEDVPLAVEE 550
            I+TL  +++ +Q+       ELT + SSI  A K +   + +AG++++TG  G  NVQGE Q+KLDV +NE F N L   G    IASEEE+  +  EE
Sbjct:    4 IKTLGEFIIDRQKDYPDASGELTSLFSSIRLAAKILHREINKAGLADITGAAGDENVQGEQQQKLDVYANERFKNALAQRGVVCGIASEEEEQFVRFEE 102          
The following BLAST results are available for this feature:
BLAST of FC876324 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
F16PA_XANCB3.050e-1139.33Fructose-1,6-bisphosphatase class 1 OS=Xanthomonas... [more]
F16PA_XANC83.050e-1139.33Fructose-1,6-bisphosphatase class 1 OS=Xanthomonas... [more]
F16PA_PSEAE3.984e-1137.23Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas... [more]
F16PA_PSEAB3.984e-1137.23Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas... [more]
F16PA_PSEA83.984e-1137.23Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas... [more]
F16PA_PSEA73.984e-1137.23Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas... [more]
F16A1_LEPCP3.984e-1141.11Fructose-1,6-bisphosphatase class 1 1 OS=Leptothri... [more]
F16A1_DECAR5.203e-1136.96Fructose-1,6-bisphosphatase class 1 1 OS=Dechlorom... [more]
F16P_YEAST6.795e-1136.56Fructose-1,6-bisphosphatase OS=Saccharomyces cerev... [more]
F16PA_HAHCH6.795e-1141.41Fructose-1,6-bisphosphatase class 1 OS=Hahella che... [more]

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Properties
Property NameValue
Genbank descriptionC32003D06EF DevOvary1 Citrus clementina cDNA clone C32003D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876324 ID=FC876324; Name=FC876324; organism=Citrus clementina; type=EST; length=551bp
GCGTAAAGCAGAAAGCAGAGGGCCAAAATGGTTGCAGCAGCAGCGACAGC
ATCATCACAGCTTCTCTTTTCAAGCTCTCACTCTTCTCTCTCGGCTCTCT
CCTTACCAAATATGTGTCTTCGACTCCAAAGCACTCGTGTCGTCATGTCC
CAGCAACGTTTTGAAGAGAAGACATGTTGGTGTTGCTGCTGGGGTTCGGT
GCATGGCTGTTGGGACAACATCGGAGGTTGCAACCAAGAAGAGAAGTTCG
TATGAGATTGAAACGCTGACAAACTGGCTGTTGAAGCAAGAACAGTCTGG
CGTTATTGATGCTGAGCTCACTATTGTGCTTTCCAGCATTTCAACGGCGT
GCAAGCAGATTGCTTCTTTGGTGCAAAGAGCTGGCATTTCCAACTTGACT
GGAATTCAGGGTGCTGTCAATGTTCAAGGCGAGGACCAGAAGAAGCTCGA
CGTCGCTTCAAATGAGGTGTTCTCAAACTGTTTGAGATCAAGTGGGCGAA
CCGGGATTATAGCGTCAGAGGAAGAGGATGTACCACTGGCGGTAGAAGAG
A
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