FC876328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.836e-11 Identity = 46/151 (30.46%), Postives = 67/151 (44.37%), Query Frame = 3 Query: 162 PPGPKPWPIVGNLPHLGP-MPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVL---TRALASAGTEPVNLAXRLNLCVVN 602 PPGP P PI GN +G + H+++ LA+ G + LR+G + L F +R N QD+VF YG WR +R+I +V F+ K + YR + E A + + A TE V + RL L + N Sbjct: 34 PPGPVPVPIFGNWLQVGDDLNHRNLTDLAKKFGEIFLLRMGQRNLVVVSSPNLAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRTGWEAEAAAVVDDVKKNPKAATEGVVIRKRLQLMMYN 184
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.703e-11 Identity = 45/151 (29.80%), Postives = 66/151 (43.71%), Query Frame = 3 Query: 162 PPGPKPWPIVGNLPHLGP-MPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVL---TRALASAGTEPVNLAXRLNLCVVN 602 PPGP P PI GN +G + H+++ LA+ G + LR+G + L F +R N QD+VF YG WR +R+I +V F+ K + YRH + E A + R A + + RL L + N Sbjct: 34 PPGPLPVPIFGNWLQVGDDLNHRNLTQLAKRFGDIFLLRMGQRNLVVVSSPDLAKEVLHTQGVEFGSRTRNVVFDIFTGEGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRHGWEAEAAAVVDDVRKNPDAAVSGLVIRRRLQLMMYN 184
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.837e-11 Identity = 44/151 (29.14%), Postives = 65/151 (43.05%), Query Frame = 3 Query: 162 PPGPKPWPIVGNLPHLGP-MPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL---ASAGTEPVNLAXRLNLCVVN 602 PPGP P PI GN +G + H+++ LA+ G + LR+G + L F +R N QD+VF YG WR +R+I +V F+ K + YRH + E A + + A + RL L + N Sbjct: 34 PPGPLPVPIFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRHGWESEAAAVVEDVKKNPDAAVSGTVIRRRLQLMMYN 184
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.837e-11 Identity = 41/125 (32.80%), Postives = 64/125 (51.20%), Query Frame = 3 Query: 165 PGPKPWPIVGNLPHLGP-MPHQSIAGLARTHGP--LMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVL 530 PGPK WPI+G+L + +PH+ + LAR HG LM LG + L +F+NRP A+ + + + I F P G WR+LR+I+S HLF+ + + + RQ ++ + Sbjct: 80 PGPKGWPIIGSLMDMSVGLPHRKLESLARLHGAKQLMSFSLGCTPAVITSDPEVARELLT--SPHFANRPLKQSAQQLLFG-RAIGFAPNGGYWRLLRRIASAHLFAPRRIAAHEAGRQADVVAM 201
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.250e-11 Identity = 38/116 (32.76%), Postives = 55/116 (47.41%), Query Frame = 3 Query: 180 WPIVGNLPHL--GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEM 521 WPI G+LP L PH+++ LA HGPL ++LG + +D S RP A+ + YN ++ PYGP WR LRKI + S ++ + VR E+ Sbjct: 47 WPIFGHLPLLIGSKSPHKALGALAEKHGPLFTIKLGAKKALVVSDWEMARECFTTNDVAVSARPKLLVAELMCYNNAMLLVAPYGPYWRELRKIIVTEILSSSRVEQLQDVRVSEV 162
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.250e-11 Identity = 37/116 (31.90%), Postives = 54/116 (46.55%), Query Frame = 3 Query: 180 WPIVGNLPHL--GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEM 521 WPI+G+LP L PH+++ LA +GP+ +++G + +D S+ P A + YN IV PYGP WR LRKI S ++ HVR E+ Sbjct: 44 WPIIGHLPLLLGSKTPHKTLGDLADKYGPIFSIKIGAKNAVVVSNWEMAKECYTTNDIAVSSLPDLISANLLCYNRSMIVVAPYGPYWRQLRKILMSEFLSPSRVEQLHHVRVSEV 159 The following BLAST results are available for this feature:
BLAST of FC876328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876328 ID=FC876328; Name=FC876328; organism=Citrus clementina; type=EST; length=604bpback to top |