FC876328

Overview
NameFC876328
Unique NameFC876328
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length604
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10302 contig Ccv1_Contig10302:1..604. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.022e-21
Identity = 53/151 (35.10%), Postives = 77/151 (50.99%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL----ASAGTEPVNLAXRLNLCVVN 602
            PP P   P++GNL  LG  PH+S+  L+R +GP+M L  G              + +K  D NFSNRP  S  + + Y+  D+ F PYG  WR +R I  + L S K +  +R VR+EE +++   +     +  T  VNL   L  C+ N
Sbjct:   28 PPSPPKLPVLGNLHQLGTFPHRSLQSLSRRYGPVMQLHFGSVPVLVASSPEAAREIMKNQDLNFSNRPNLSIPRRLLYDNHDVAFAPYGEYWRQIRSICVLQLLSNKRVQSFRRVREEETSIMVEKIMQLQKTTPTAAVNLTDLLT-CLTN 177          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.947e-21
Identity = 47/141 (33.33%), Postives = 81/141 (57.45%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAXRL 584
            PPGP+ WPI+GN+  +  + H+ +A LA+ +G L +LR+GF             Q L++ DS FSNRP      ++ Y+  D+ F  YGP WR +RK+  + +FS K  + +  VR +E+  + R+++    +P+N+  ++
Sbjct:   41 PPGPRGWPIIGNMLMMDQLTHRGLANLAKKYGGLCHLRMGFLHMYAVSSPEVARQVLQVQDSVFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKVCVMKVFSRKRAESWASVR-DEVDKMVRSVSCNVGKPINVGEQI 180          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.947e-21
Identity = 53/140 (37.86%), Postives = 82/140 (58.57%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEM----AVLTRALASAGTEPVN 569
            PPGP   PI+GNL  LGP+PH+++  LAR +GP+M LRLG              + LK+HD +  +RP + G K ++Y+ +++ F PYG  WR +RK+ ++ L S + +    + R++EM    A L RA AS  +  +N
Sbjct:   56 PPGPAQLPILGNLHLLGPLPHKNLRELARRYGPVMQLRLGTVPTVVVSSAEAAREVLKVHDVDCCSRPASPGPKRLSYDLKNVGFAPYGEYWREMRKLFALELLSMRRVKAACYAREQEMDRLVADLDRAAASKASIVLN 195          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.156e-21
Identity = 51/144 (35.42%), Postives = 78/144 (54.17%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLG---PMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAXRL 584
            PPGP   PI+GNL  L     +P Q++  L R +GPLM+L+LG              + +K HD +F  RP     + + Y   DI F PYG  WR +RKI ++ L S K +  + H+RQ+E   L +++ S+   P++L+ +L
Sbjct:   34 PPGPWRLPIIGNLHQLALAASLPDQALQKLVRKYGPLMHLQLGEISTLVVSSPKMAMEMMKTHDVHFVQRPQLLAPQFMVYGATDIAFAPYGDYWRQIRKICTLELLSAKRVQSFSHIRQDENKKLIQSIHSSAGSPIDLSGKL 177          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.156e-21
Identity = 50/130 (38.46%), Postives = 71/130 (54.62%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASA 551
            PPGP   PI+GNL  LG   H+S   L++ +GP+M+L  G              + LK HD     RP  +  K  +YNY+DI F  YG  WR +RK++ + LFS K L  +R++R+EE  VL   L+ +
Sbjct:   29 PPGPLGLPIIGNLHQLGKSLHRSFHKLSQNYGPVMFLHFGVVPVVVVSTREAAEEVLKTHDLETCTRPKLTATKLFSYNYKDIGFAQYGDDWREMRKLAMLELFSSKKLKAFRYIREEESEVLVNKLSKS 158          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.156e-21
Identity = 48/143 (33.57%), Postives = 78/143 (54.55%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAXRL 584
            PP P  +P++GNL  +G +PH+S+  LA  +GP+M L  GF             + L+ HD +  +RP   G + ++ N++D+ F PYG  W+  RK +   LF  K +  +RH+R+EE   L + L+ +     PV+L+  L
Sbjct:   31 PPSPPKFPVIGNLHQIGELPHRSLQHLAERYGPVMLLHFGFVPVTVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRNFKDVCFTPYGNEWKARRKFALRELFCLKKVQSFRHIREEECNFLVKQLSESAVNRSPVDLSKSL 173          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.156e-21
Identity = 52/143 (36.36%), Postives = 78/143 (54.55%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAXRL 584
            PPGP   PI+GNL  LG  PH+S+  L+ T+GPLM L+ G              + LK  D    +RP  +    + YN +D+ F PY   WR +RK++ V L++ K +  ++H R+EE+A L   +  A +  +PVNL  +L
Sbjct:   30 PPGPPRLPIIGNLHQLGSKPHRSMFKLSETYGPLMSLKFGSVSTVVASTPETVKEVLKTFDVECCSRPNMTYPARVTYNLKDLCFSPYSKYWREVRKMTVVELYTAKRVQSFQHTRKEEVAALVDFIKQAASLEKPVNLNKKL 172          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 5.156e-21
Identity = 48/140 (34.29%), Postives = 80/140 (57.14%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLA 575
            PP P   PI+GNL HL  +PH+    L+  +GPL++LRLG                LK +D    +RP   G+  ++Y ++DI F PYG  WR +RK++ + LFS K +  +R++R+EE+  + + ++ +  +  PV+L+
Sbjct:   32 PPSPSSLPIIGNLHHLAGLPHRCFHKLSIKYGPLVFLRLGSVPVVVISSSEAAEAVLKTNDLECCSRPKTVGSGKLSYGFKDITFAPYGEYWREVRKLAVIELFSSKKVQSFRYIREEEVDFVVKKVSESALKQSPVDLS 171          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.149e-20
Identity = 54/149 (36.24%), Postives = 84/149 (56.38%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL---ASAGTEPVNLAXRLNLCVV 599
            PP P  +PI+GNL  LG +PHQS+  L++ +G +M L+ G              Q LKIHD +  +RP  +G + ++YNY DI F P+   W+ LR+I    LFS K +  ++ ++++E+  L  ++   AS GT PVNL+ +     V
Sbjct:   32 PPSPPGFPIIGNLHQLGELPHQSLWRLSKKYGHVMLLKFGSIPTVVVSSSETAKQVLKIHDLHCCSRPSLAGPRALSYNYLDIAFSPFDDYWKELRRICVQELFSVKRVQSFQPIKEDEVKKLIDSVSESASQGT-PVNLSEKFTSLTV 179          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.500e-20
Identity = 50/122 (40.98%), Postives = 70/122 (57.38%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRP-PNSGAKHIAYNYQDIV--FRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEE 518
            PP PK  PI+G+L  + P+PHQ    L+  HGP+M L LG              +FLK H+ NFSNRP  N   K +AY+ QD +  F P+GP W+ ++K+    L SG+ +D +  VRQ+E
Sbjct:   30 PPSPKALPIIGHLHLVSPIPHQDFYKLSTRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPGQNVAVKGLAYDSQDFLFAFAPFGPYWKFMKKLCMSELLSGRMMDQFLPVRQQE 151          
The following BLAST results are available for this feature:
BLAST of FC876328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
C71A6_NEPRA3.022e-2135.10Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C84A1_ARATH3.947e-2133.33Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C71E1_SORBI3.947e-2137.864-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71D8_SOYBN5.156e-2135.42Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71BM_ARATH5.156e-2138.46Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C71BK_ARATH5.156e-2133.57Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
C71BC_ARATH5.156e-2136.36Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]
C71B2_ARATH5.156e-2134.29Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C71BX_ARATH1.149e-2036.24Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]
C93A1_SOYBN1.500e-2040.98Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32003D11EF DevOvary1 Citrus clementina cDNA clone C32003D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876328 ID=FC876328; Name=FC876328; organism=Citrus clementina; type=EST; length=604bp
GGCGACTACTCGTACCATTTCTACACTTTCTCTGGGAAACGAAACAAAGA
GCAATGTCTACTTTACCACTACTGATACTGTACACATCACTTTTGGCAAT
TGTCATTTCTTTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCT
CCCACCGTCTGCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTC
CCTCACTTGGGCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAAC
CCACGGCCCCCTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGG
CCGCTTCCGCTTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAAC
TTCTCCAACCGCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTA
TCAGGACATCGTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGA
AGATCAGCTCCGTTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGG
CACGTTCGCCAGGAAGAGATGGCGGTGCTCACGCGCGCGTTGGCGAGTGC
AGGAACGGAGCCGGTGAACTTAGCTCNACGGTTGAACTTGTGCGTTGTGA
ATGC
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