FC876328

Overview
NameFC876328
Unique NameFC876328
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length604
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10302 contig Ccv1_Contig10302:1..604. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.500e-20
Identity = 48/143 (33.57%), Postives = 79/143 (55.24%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAXRL 584
            PP P  +P++GNL  +G +PH+S+  LA  +GP+M L  GF             + L+ HD +  +RP   G + ++ +++DI F PYG  W+  RK +   LF  K +  +RH+R+EE   L + L+ +  +  PV+L+  L
Sbjct:   31 PPSPPKFPVIGNLHQIGELPHRSLQHLAERYGPVMLLHFGFVPITVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRDFKDIGFTPYGNEWKARRKFALRELFCLKKVQSFRHIREEECNFLVKQLSESAVDRSPVDLSKSL 173          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.500e-20
Identity = 51/143 (35.66%), Postives = 75/143 (52.45%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAXRL 584
            PPGPK  PI+GNL +L  +PH     L++  GP+M L  GF             + LK  D    +RP     + I+YN++DI F PYG  W+ LRK+  + L + K    +R++R+EE  +L + L  +  +  PVNL   L
Sbjct:   33 PPGPKTLPIIGNLHNLTGLPHTCFRNLSQKFGPVMLLHFGFVPVVVISSKEGAEEALKTQDLECCSRPETVATRMISYNFKDIGFAPYGEEWKALRKLVVMELLNTKKFQSFRYIREEENDLLIKKLTESALKKSPVNLKKTL 175          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.959e-20
Identity = 53/143 (37.06%), Postives = 79/143 (55.24%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAXRLN 587
            PPGP   PI+G++PHL G  PH+ +  LA+ +GPLM+L+LG              + +K HD  F++RP +     + Y   DI F PYG  WR +RKI +V L S K +     +R+EE+  L + +AS     VNL+  ++
Sbjct:   20 PPGPWKLPIIGSIPHLVGSPPHRKLRDLAKKYGPLMHLQLGEVIFIIVSSAEYAKEVMKTHDVTFASRPRSLFTDIVFYGSTDIGFSPYGDYWRQVRKICNVELLSMKRVQSLWPIREEEVKNLIQRIASEEGSVVNLSQAID 162          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.959e-20
Identity = 53/143 (37.06%), Postives = 76/143 (53.15%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAG--TEPVNLAXRL 584
            PPGP   P +GNL  L  +P ++   L   +GP++ LR GF             + LKIHD    +RP  +G + I+YN++DI F PYG  W+ +RK+S V LF+ K    +R +R+EE  +L + L        PVNL   L
Sbjct:   29 PPGPPKLPFIGNLHQLQELPPRN---LNHKYGPVILLRFGFVPLVVISSKEAAEEVLKIHDLECCSRPETAGTRKISYNFKDIGFAPYGEEWKAMRKLSVVELFTAKKHQYFRSIREEENDLLVKKLTELALTRSPVNLKKTL 168          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.559e-20
Identity = 49/132 (37.12%), Postives = 70/132 (53.03%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGA-KHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAG 554
            PP P P PI+G+L  L P PHQ    L+  +GP+++L LG              +FLK H+  FSNRP N+ A + + Y +QD +F PYGP W+ ++K+    L  G  LD +  VRQ E     + +   G
Sbjct:   32 PPSPMPLPIIGHLHLLSPTPHQDFHKLSLRYGPIIHLFLGSVPCVVASTAEAAKEFLKTHEPAFSNRPANTVAVETLTYGFQDFLFAPYGPYWKFMKKLCMSELLGGHMLDQFLPVRQXETKKFIKRVLQKG 163          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.559e-20
Identity = 50/135 (37.04%), Postives = 79/135 (58.52%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHL-GPMP-HQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE 560
            PPGP+  P++GN+  + G +P H  +  LA  +GPLM+L+LG              + +K HD NFS+RP    ++ ++YN   IVF  +G  WR LRKI +V L + K +  +R +R+EE+A L + +A+  +E
Sbjct:   44 PPGPRTLPLIGNIHQIVGSLPVHYYLKNLADKYGPLMHLKLGEVSNIIVTSPEMAQEIMKTHDLNFSDRPDFVLSRIVSYNGSGIVFSQHGDYWRQLRKICTVELLTAKRVQSFRSIREEEVAELVKKIAATASE 178          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 3.342e-20
Identity = 48/136 (35.29%), Postives = 76/136 (55.88%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVN 569
            PPGP   PI+GNL  LG + ++S   +++ +GP++ LRLG              + LK HD     RP  +      YN++DI F P+G  WR +RKI+++ LFS K L  +R++R+EE  +L + ++ +  E  N
Sbjct:   29 PPGPIGLPIIGNLHQLGKLLYKSFHKISQEYGPVVLLRLGVVPVIVVSSKEGAEEVLKTHDLETCTRPKTAATGLFTYNFKDIGFAPFGDDWREMRKITTLELFSVKKLKSFRYIREEESELLVKKISKSVDETQN 164          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.364e-20
Identity = 48/138 (34.78%), Postives = 79/138 (57.25%), Query Frame = 3
Query:  165 PGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNL 572
            P P  +PI+GNL  +G +PHQ++  L++ +GP+M+L LG              Q L++HD +   RP  SG + ++YNY DI F PY   W+ +RK+    LFS K +   + ++ EE+  +  ++A + ++  PVNL
Sbjct:   32 PCPPGFPIIGNLHQIGELPHQTLWKLSKKYGPVMHLMLGRVPTVVVSSSDTARQVLRVHDLHCCTRPSLSGPRELSYNYLDIAFSPYDDYWKEVRKLCVQELFSTKQVHSIQPIKDEEVKKMIDSIAESASQKNPVNL 169          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.364e-20
Identity = 53/143 (37.06%), Postives = 77/143 (53.85%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAXRL 584
            PPGP   PI+GNL  LG  PH S+  L+  +GPLM LR G              + LK  D+   +RP  +    + YN +DI F PY   WR +RK++ V L++ K +  ++H R+EE+A L   +  A +  +PVNL  +L
Sbjct:   30 PPGPPRLPIIGNLHQLGSKPHSSMFKLSEKYGPLMALRFGSVSTVVASTPETVKEVLKTFDAECCSRPYMTYPARLTYNLKDIGFCPYTKYWREVRKMTVVELYTAKRVQSFQHTRKEEVASLVDFITQAASLEKPVNLNTKL 172          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 5.700e-20
Identity = 49/143 (34.27%), Postives = 75/143 (52.45%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAXRL 584
            PP P   P++GNL  LGP PH+ +  L+  +GPLM L  G                +K HD  F+NRP +          +DI+F PYG  W+ ++ +  VHL + K +  + ++R+EE+ V+T  L  AS+ +  VNL+  L
Sbjct:   34 PPSPWRLPVIGNLHQLGPNPHRYLHSLSLRYGPLMLLHFGRVPVLVVSCPDVTNDIMKTHDLKFANRPKSKAINIFMEGGRDIIFGPYGEDWKSMKSLGVVHLLNNKMVRSFENLREEEIKVMTEKLEEASSSSSSVNLSKLL 176          
The following BLAST results are available for this feature:
BLAST of FC876328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
C71BJ_ARATH1.500e-2033.57Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
C71B7_ARATH1.500e-2035.66Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
C71DB_LOTJA1.959e-2037.06Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71BT_ARATH1.959e-2037.06Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C93A3_SOYBN2.559e-2037.12Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C71DA_SOYBN2.559e-2037.04Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C71BZ_ARATH3.342e-2035.29Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71BW_ARATH4.364e-2034.78Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C71BB_ARATH4.364e-2037.06Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]
C71AR_ARATH5.700e-2034.27Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC32003D11EF DevOvary1 Citrus clementina cDNA clone C32003D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876328 ID=FC876328; Name=FC876328; organism=Citrus clementina; type=EST; length=604bp
GGCGACTACTCGTACCATTTCTACACTTTCTCTGGGAAACGAAACAAAGA
GCAATGTCTACTTTACCACTACTGATACTGTACACATCACTTTTGGCAAT
TGTCATTTCTTTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCT
CCCACCGTCTGCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTC
CCTCACTTGGGCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAAC
CCACGGCCCCCTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGG
CCGCTTCCGCTTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAAC
TTCTCCAACCGCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTA
TCAGGACATCGTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGA
AGATCAGCTCCGTTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGG
CACGTTCGCCAGGAAGAGATGGCGGTGCTCACGCGCGCGTTGGCGAGTGC
AGGAACGGAGCCGGTGAACTTAGCTCNACGGTTGAACTTGTGCGTTGTGA
ATGC
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