FC876328

Overview
NameFC876328
Unique NameFC876328
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length604
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10302 contig Ccv1_Contig10302:1..604. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.006e-16
Identity = 45/140 (32.14%), Postives = 70/140 (50.00%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLA 575
            PP P   P++GNL  L   PH+S+  L+  +GPLM L  G              + LK HD  F+NRP +     +    +D+VF PYG  WR ++ +  ++L + K +  +  VR+EE+  +   L  AS  +   NL+
Sbjct:   34 PPSPWRIPVIGNLHQLSLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSSEAAHEILKTHDLKFANRPKSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKVREEEVNAMMEKLEKASCSSSAENLS 173          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.314e-16
Identity = 47/143 (32.87%), Postives = 72/143 (50.35%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAXRL 584
            PP P  +P++GNL  +G +PH+S   LA   G +M L  GF             + L+ HD     RP   G++ I+  ++DI F PYG  WR  RK     LF  K +  + ++ +EE  +L + L  ++ G  PV+L+  L
Sbjct:   31 PPSPPTFPVIGNLHQVGELPHRSFQRLAERTGHVMLLHFGFVPVTVISSREAAEEVLRTHDLKCCTRPKLVGSRLISRGFKDISFTPYGEEWRERRKFLVRELFCFKKVQYFGYIVEEECNLLVKKLTESAVGRPPVDLSKSL 173          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.314e-16
Identity = 44/140 (31.43%), Postives = 72/140 (51.43%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLA 575
            PP P   P++GNL  L   PH+S+  L+  +GPLM L  G              + LK HD  F+NRP +     +    +D+VF PYG  WR ++ +  ++L + K +  +  +R+EE+  + + L  AS+ +   NL+
Sbjct:   34 PPSPWRLPLIGNLHQLSLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDLKFANRPRSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKIREEELNEMIKKLEKASSSSSSENLS 173          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.242e-16
Identity = 45/143 (31.47%), Postives = 73/143 (51.05%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAXRL 584
            PP P   P++GNL  L   PH+S+  L+  +GPLM L  G                +K HD   +NRP     + I    +++VF PYG  WR ++ +  V+L + K +  +  VR+EE++ +   +  AS+ + P+NL+  L
Sbjct:   34 PPSPWRVPVIGNLHQLSLHPHRSLRSLSHRYGPLMLLHFGRVPVLVVSSSDVAHDLMKTHDLKVANRPQLKVVEKIFNGGREMVFSPYGEYWRQIKSVCIVNLLNKKKVQSFEKVREEEISEMMERVEKASSDSSPLNLSELL 176          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.823e-16
Identity = 49/131 (37.40%), Postives = 64/131 (48.85%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGP-MPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASA 551
            PPGP   P++GNL HL    PH ++  LA  HGP+MYLRLG              + L+  D+ F++RP    A  I Y   D+ F PYG  WRMLRK+    L +   +     VR  E   L R +  A
Sbjct:   28 PPGPWRLPLIGNLLHLATSQPHVALRDLAMKHGPVMYLRLGQVDAVVISSPAAAQEVLRDKDTTFASRPSLLVADIILYGSMDMSFAPYGGNWRMLRKLCMSELLNTHKVRQLAAVRDSETLSLVRKVVYA 158          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 4.994e-16
Identity = 53/153 (34.64%), Postives = 75/153 (49.02%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASA--------GTEPVNLAXRLNLC 593
            PPGP   P+VG L HL    P  ++  LA  +GP+M+LR+G              + L+  D  F++RP    ++   Y+  D+ F PYG  WRMLRK+ +V L S K +     VR +E   L R + +A        G +PV LA  L  C
Sbjct:   60 PPGPWNLPLVGGLLHLLRSHPQVALRELASKYGPVMFLRMGQIDTVVVSSPAAAQEVLRDKDVMFASRPSLLVSEIFCYDNLDVGFAPYGAYWRMLRKLCTVELLSTKVVRQLAPVRNDETLTLVRNIKAASSGHGGGGGKKPVTLARLLTTC 212          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.994e-16
Identity = 45/142 (31.69%), Postives = 78/142 (54.93%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAXRL 584
            PPGP   P+VG+L  L G +P  ++A +A+ +GP+ +++LG              + +K+ D   ++R  + G + + Y+  DI+F PY   WR +RKI    L S + +  +  +RQ+EM+ L R L S+  E V++  R+
Sbjct:   35 PPGPPKLPLVGHLHLLWGKLPQHAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRFESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSSAGETVDMTERI 176          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.994e-16
Identity = 45/142 (31.69%), Postives = 78/142 (54.93%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAXRL 584
            PPGP   P+VG+L  L G +P  ++A +A+ +GP+ +++LG              + +K+ D   ++R  + G + + Y+  DI+F PY   WR +RKI    L S + +  +  +RQ+EM+ L R L S+  E V++  R+
Sbjct:   35 PPGPPKLPLVGHLHLLWGKLPQHAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRFESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSSAGETVDMTERI 176          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.994e-16
Identity = 44/143 (30.77%), Postives = 73/143 (51.05%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAXRL 584
            PP P   P++GNL  +G +PH+S   LA   G +M L LGF             + L+ HD +  +RP   G++ I+  ++D+ F PYG  W+  R+     LF  K L  + ++++ E   L + L+ +  +  PV+L+  L
Sbjct:   31 PPSPPKLPVIGNLHQVGELPHRSFRRLAERTGHVMLLHLGFVPVTVISSREAAEEVLRTHDLDCCSRPNLVGSRLISRGFKDLNFTPYGEEWKERRRFLVGELFCSKKLQSFIYIKEVECNFLVKKLSESAVDQSPVDLSKTL 173          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.518e-16
Identity = 45/130 (34.62%), Postives = 65/130 (50.00%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASA 551
            PPGP   PI+GNL  LG + H S   L+  HGP+M LR G              Q LK  D    +RP          N++DI F  YG  WR ++K+  + LF+ K    +R++R+EE  +L + L+ +
Sbjct:   31 PPGPTGLPIIGNLHQLGRLLHSSFHKLSLEHGPVMLLRFGVVPMVVISSKEAAKQVLKSRDLETCSRPKLVANGLFTRNFKDIAFAQYGEDWREMKKLVGLELFNPKKHKFFRYIREEEGDLLVKKLSKS 160          
The following BLAST results are available for this feature:
BLAST of FC876328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
C71AI_ARATH1.006e-1632.14Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C71BG_ARATH1.314e-1632.87Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
C71AC_ARATH1.314e-1631.43Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C71AE_ARATH2.242e-1631.47Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C99A1_SORBI3.823e-1637.40Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C99A2_ORYSJ4.994e-1634.64Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C7D95_MENSP4.994e-1631.69Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C7D95_MENGR4.994e-1631.69Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C71BH_ARATH4.994e-1630.77Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C71B8_ARATH8.518e-1634.62Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC32003D11EF DevOvary1 Citrus clementina cDNA clone C32003D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876328 ID=FC876328; Name=FC876328; organism=Citrus clementina; type=EST; length=604bp
GGCGACTACTCGTACCATTTCTACACTTTCTCTGGGAAACGAAACAAAGA
GCAATGTCTACTTTACCACTACTGATACTGTACACATCACTTTTGGCAAT
TGTCATTTCTTTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCT
CCCACCGTCTGCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTC
CCTCACTTGGGCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAAC
CCACGGCCCCCTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGG
CCGCTTCCGCTTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAAC
TTCTCCAACCGCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTA
TCAGGACATCGTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGA
AGATCAGCTCCGTTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGG
CACGTTCGCCAGGAAGAGATGGCGGTGCTCACGCGCGCGTTGGCGAGTGC
AGGAACGGAGCCGGTGAACTTAGCTCNACGGTTGAACTTGTGCGTTGTGA
ATGC
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