FC876328

Overview
NameFC876328
Unique NameFC876328
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length604
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10302 contig Ccv1_Contig10302:1..604. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.518e-16
Identity = 44/143 (30.77%), Postives = 76/143 (53.15%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAXRLNL 590
            PPGP   PI+GN+  LG +PH+S+  L+  +GP++ + LG              + LK+HDS    RP  S  K   Y+   + F  +G  +R +RK+  + LFS K  + +R++R+EE++ L  + + + +   ++    NL
Sbjct:   37 PPGPPRLPILGNIHQLGSLPHRSLRDLSLKYGPVITVYLGSVRTVVVHSPETAEEVLKLHDSECCTRPKLSITKSFFYDGLGLGFTKWGDYYRDVRKLCVLELFSVKRANSFRNIREEELSRLVNSFSDSASSGSSVDLTANL 179          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.112e-15
Identity = 43/142 (30.28%), Postives = 78/142 (54.93%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAXRL 584
            PPGP   P++G+L  L G +P  ++A +A+ +GP+ +++LG              + +K+ D   +NR  + G + + Y+ +DI+F PY   WR +RKI    L S + +  +  +RQ+E++ L R L S+    V++  R+
Sbjct:   36 PPGPPKLPLIGHLHLLWGKLPQHALASVAKEYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACANRFESIGTRIMWYDNEDIIFSPYSEHWRQMRKICVSELLSSRNVRSFGFIRQDEVSRLLRHLRSSAGAAVDMTERI 177          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.237e-15
Identity = 52/147 (35.37%), Postives = 71/147 (48.30%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAXRLNLC 593
            PPGP   P+VG L HL    P  ++  LA  +GP+M+LR G              + L+  D  F++RP    ++   Y   DI F PYG  WRMLRK+ +V L S K +     +R  E   L R +  A+ G +P  LA  L  C
Sbjct:   36 PPGPWNLPLVGGLLHLLRSQPQVALRDLAGKYGPVMFLRTGQVDTVVISSPAAAQEVLRDKDVTFASRPSLLVSEIFCYGNLDIGFAPYGAYWRMLRKLCTVELLSTKMVRQLAPIRDGETLALVRNIEAAAGGKKPFTLATLLISC 182          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.237e-15
Identity = 47/147 (31.97%), Postives = 68/147 (46.26%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAXRLNLCVVN 602
            PPGPKPWPIVGNL  LG  PH   A LA+T+G +  L++G              + LK HD   S R      +   +    IV+      W+ LRK+    LF+ K ++   HVR+++   +   L     E V +   +   +VN
Sbjct:   30 PPGPKPWPIVGNLLQLGEKPHAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMKKQGEEVKIVEVIFGTLVN 176          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.237e-15
Identity = 47/147 (31.97%), Postives = 68/147 (46.26%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAXRLNLCVVN 602
            PPGPKPWPIVGNL  LG  PH   A LA+T+G +  L++G              + LK HD   S R      +   +    IV+      W+ LRK+    LF+ K ++   HVR+++   +   L     E V +   +   +VN
Sbjct:   29 PPGPKPWPIVGNLLQLGEKPHAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMKKQGEEVKIVEVIFGTLVN 175          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.237e-15
Identity = 43/130 (33.08%), Postives = 67/130 (51.54%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASA 551
            PP P   P++GNL  L  + H+ +  L++ HGP++ LRLGF             + LK+HD     RP  +    +  + QDI   PYG   R LRK+S +  FS   +  +R++R+EE  ++ + L  A
Sbjct:   27 PPSPLKLPVIGNLYQLRGLFHKCLHDLSKKHGPVLLLRLGFLDMVVISSTEAAEEALKVHDLECCTRPITNVTSKLWRDGQDIGLAPYGESLRELRKLSFLKFFSTTKVRSFRYIREEENDLMVKKLKEA 156          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.227e-15
Identity = 40/137 (29.20%), Postives = 75/137 (54.74%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNL 572
            PPGP+PWP+VGNL  + P+  +  A  A+++GP++ +  G              + LK HD   ++R  +  A   + + +D+++  YGP +  +RK+ ++ LFS K L+  R +R++E+  +  ++ +  T   NL
Sbjct:   29 PPGPRPWPVVGNLYDIKPVRFRCFAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQLLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVTSMVDSVYNHCTSTENL 165          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.227e-15
Identity = 45/123 (36.59%), Postives = 64/123 (52.03%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVL 530
            PPGP   PI+GNL  LG +PHQS+A LA+ HGP+M L+LG              + LK  D  FS R      +   +    I F      WR LR+I S ++FS  +L+  +H+R +++  L
Sbjct:   29 PPGPTRLPIIGNLHLLGALPHQSLAKLAKIHGPIMSLQLGQITTLVISSATAAEEVLKKQDLAFSTRNVPDAVRAYNHERHSISFLHVCTEWRTLRRIVSSNIFSNSSLEAKQHLRSKKVEEL 151          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.211e-15
Identity = 42/143 (29.37%), Postives = 74/143 (51.75%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAXRLNL 590
            PPGP P PIVGNL  + P+  +     A+++GP++ + +G              + LK HD   ++R  N   +  + N QD+++  YGP +  +RK+ ++ LF+ K L+  R +R++E+  +  ++      P N A  L L
Sbjct:   28 PPGPSPKPIVGNLYDIKPVRFRCYYEWAQSYGPIISVWIGSILNVVVSSAELAKEVLKEHDQKLADRHRNRSTEAFSRNGQDLIWADYGPHYVKVRKVCTLELFTPKRLESLRPIREDEVTAMVESVFRDCNLPENRAKGLQL 170          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 7.211e-15
Identity = 45/142 (31.69%), Postives = 66/142 (46.48%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEE----MAVLTRALASAGTEPVNLA 575
            PP P   P++GNL  L    H+S+  L+  +GPLM L  G                +K HD   +NRP       I    +D+ F PYG  WR ++ I   +L + K +  Y  +R+EE    +  L +A  S+   PVNL+
Sbjct:   33 PPSPWRLPVIGNLHQLSLHTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDVMKTHDLVCANRPKTKVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMVRSYEKIREEEIKRMIEKLEKASCSSSPSPVNLS 174          
The following BLAST results are available for this feature:
BLAST of FC876328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
C71B6_ARATH8.518e-1630.77Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C71DF_MENPI1.112e-1530.28Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C99A3_ORYSJ3.237e-1535.37Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C80B2_ESCCA3.237e-1531.97(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C80B1_ESCCA3.237e-1531.97(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C71BO_ARATH3.237e-1533.08Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C98A2_SOYBN4.227e-1529.20Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C76B1_HELTU4.227e-1536.597-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C98A3_ARATH7.211e-1529.37Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C71AK_ARATH7.211e-1531.69Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC32003D11EF DevOvary1 Citrus clementina cDNA clone C32003D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876328 ID=FC876328; Name=FC876328; organism=Citrus clementina; type=EST; length=604bp
GGCGACTACTCGTACCATTTCTACACTTTCTCTGGGAAACGAAACAAAGA
GCAATGTCTACTTTACCACTACTGATACTGTACACATCACTTTTGGCAAT
TGTCATTTCTTTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCT
CCCACCGTCTGCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTC
CCTCACTTGGGCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAAC
CCACGGCCCCCTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGG
CCGCTTCCGCTTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAAC
TTCTCCAACCGCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTA
TCAGGACATCGTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGA
AGATCAGCTCCGTTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGG
CACGTTCGCCAGGAAGAGATGGCGGTGCTCACGCGCGCGTTGGCGAGTGC
AGGAACGGAGCCGGTGAACTTAGCTCNACGGTTGAACTTGTGCGTTGTGA
ATGC
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