FC876330
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876330 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 2.925e-17 Identity = 35/101 (34.65%), Postives = 47/101 (46.53%), Query Frame = 2 Query: 239 ISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDS 541 IS+ F+ RN F+ Y +FITA ++ GFGTTG + +E+ AF A +T+ G+ A G AWG CY E SYC S Sbjct: 85 ISNIISSSMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFR--GFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPSYCVQS 183 HSP 2 Score: 42.3578 bits (98), Expect = 2.925e-17 Identity = 16/27 (59.26%), Postives = 19/27 (70.37%), Query Frame = 1 Query: 553 YPCTPGAEYYARGAIPIYWNYNYGATG 633 +PC PG +YY RG I I +NYNYG G Sbjct: 186 WPCAPGQKYYGRGPIQISYNYNYGPCG 212
BLAST of FC876330 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.363e-17 Identity = 32/92 (34.78%), Postives = 47/92 (51.09%), Query Frame = 2 Query: 266 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDS 541 F+ RN A GF+ Y +F+ A + GFGTTG+ + +E+ AFLA +T+ G+ A G AWG C+ E + +YC S Sbjct: 89 FDRMLLHRNDGACQAKGFYTYDAFVAAAGAFP--GFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPS 178 HSP 2 Score: 40.0466 bits (92), Expect = 8.363e-17 Identity = 15/27 (55.56%), Postives = 17/27 (62.96%), Query Frame = 1 Query: 553 YPCTPGAEYYARGAIPIYWNYNYGATG 633 +PC PG YY RG I + NYNYG G Sbjct: 181 WPCAPGKSYYGRGPIQLSHNYNYGPAG 207
BLAST of FC876330 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 67.3958 bits (163), Expect = 8.366e-17 Identity = 32/92 (34.78%), Postives = 47/92 (51.09%), Query Frame = 2 Query: 266 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDS 541 F+ RN A GF+ Y +F+ A ++ GFGTTG + +E+ AFLA +T+ G+ A G AWG C+ E + +YC S Sbjct: 86 FDRMLLHRNDGACQAKGFYTYDAFVAAASAFR--GFGTTGGTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPS 175 HSP 2 Score: 40.0466 bits (92), Expect = 8.366e-17 Identity = 15/27 (55.56%), Postives = 17/27 (62.96%), Query Frame = 1 Query: 553 YPCTPGAEYYARGAIPIYWNYNYGATG 633 +PC PG YY RG I + NYNYG G Sbjct: 178 WPCAPGKSYYGRGPIQLSHNYNYGPAG 204
BLAST of FC876330 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 1.087e-16 Identity = 34/91 (37.36%), Postives = 47/91 (51.65%), Query Frame = 2 Query: 263 QFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYG-VATGGPLAWGLCYNHEMSPSQSYC 532 +F+ RN A GF+ Y +FI A + F TTG + +E+ AFLA +T+ G G A GP WG CYN E++P+ YC Sbjct: 80 RFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFP--AFATTGDDATRKREVAAFLAQTSHETTGGAGWAAPDGPYTWGYCYNRELNPA-DYC 167 HSP 2 Score: 44.669 bits (104), Expect = 1.087e-16 Identity = 15/27 (55.56%), Postives = 19/27 (70.37%), Query Frame = 1 Query: 553 YPCTPGAEYYARGAIPIYWNYNYGATG 633 YPC PG +Y+ RG + + WNYNYG G Sbjct: 173 YPCAPGKQYFGRGPMQLTWNYNYGQCG 199
BLAST of FC876330 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 1.411e-16 Identity = 31/92 (33.70%), Postives = 45/92 (48.91%), Query Frame = 2 Query: 266 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDS 541 FE RN A GF+ Y++F+ A + FG TG + +E+ AFL +T+ G+ A GP +WG C+ E +P YC S Sbjct: 98 FERLLLHRNDGACPARGFYTYEAFLAAAAAFP--AFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPS 187 HSP 2 Score: 40.0466 bits (92), Expect = 1.411e-16 Identity = 14/27 (51.85%), Postives = 19/27 (70.37%), Query Frame = 1 Query: 553 YPCTPGAEYYARGAIPIYWNYNYGATG 633 +PC PG +YY RG I + +N+NYG G Sbjct: 190 WPCAPGRKYYGRGPIQLSFNFNYGPAG 216
BLAST of FC876330 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 1.413e-16 Identity = 34/89 (38.20%), Postives = 45/89 (50.56%), Query Frame = 2 Query: 266 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYC 532 F+ RN GF+ Y +FI A + GFGTTG K KE+ AFLA +T+ G+ A GP AWG C+ E + + YC Sbjct: 89 FDQMLKYRNDGRCAGHGFYTYDAFIAAARSFN--GFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYC 175 HSP 2 Score: 40.4318 bits (93), Expect = 1.413e-16 Identity = 15/27 (55.56%), Postives = 18/27 (66.67%), Query Frame = 1 Query: 553 YPCTPGAEYYARGAIPIYWNYNYGATG 633 +PC PG +YY RG I + NYNYG G Sbjct: 180 WPCAPGKKYYGRGPIQLTHNYNYGLAG 206
BLAST of FC876330 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 1.838e-16 Identity = 34/89 (38.20%), Postives = 44/89 (49.44%), Query Frame = 2 Query: 266 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYC 532 F + RN GF+ Y +FI A + GFGTTG + +EI AFLA +T+ G+ A GP AWG CY E +YC Sbjct: 74 FNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFP--GFGTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGAYC 160 HSP 2 Score: 39.6614 bits (91), Expect = 1.838e-16 Identity = 15/27 (55.56%), Postives = 18/27 (66.67%), Query Frame = 1 Query: 553 YPCTPGAEYYARGAIPIYWNYNYGATG 633 +PC G +YY RG I I +NYNYG G Sbjct: 166 WPCAAGRKYYGRGPIQISYNYNYGQAG 192
BLAST of FC876330 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 2.401e-16 Identity = 32/102 (31.37%), Postives = 49/102 (48.04%), Query Frame = 2 Query: 236 TISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDS 541 ++S QF+ RN A GF+ Y +F+ A + GFG TG+ + +++ AFLA +T+ G+ A G AWG C+ E + YC S Sbjct: 24 SVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFP--GFGATGSTDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPS 123 HSP 2 Score: 40.0466 bits (92), Expect = 2.401e-16 Identity = 15/27 (55.56%), Postives = 17/27 (62.96%), Query Frame = 1 Query: 553 YPCTPGAEYYARGAIPIYWNYNYGATG 633 +PC PG YY RG I + NYNYG G Sbjct: 126 WPCAPGKRYYGRGPIQLSHNYNYGPAG 152
BLAST of FC876330 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 3.098e-16 Identity = 39/103 (37.86%), Postives = 54/103 (52.43%), Query Frame = 2 Query: 239 ISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYN 547 +SD +F+ RN A GF+ Y +FI+A ++ FG TG L + +EI AFL +T+ G+ A GP AWG CY E++ Q YCD S N Sbjct: 89 LSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPD--FGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEIN-CQPYCDPSSN 188 HSP 2 Score: 37.7354 bits (86), Expect = 3.098e-16 Identity = 14/27 (51.85%), Postives = 16/27 (59.26%), Query Frame = 1 Query: 553 YPCTPGAEYYARGAIPIYWNYNYGATG 633 Y C G +Y RG I + WNYNYG G Sbjct: 189 YQCVAGKQYCGRGPIQLSWNYNYGLCG 215
BLAST of FC876330 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 4.035e-16 Identity = 36/123 (29.27%), Postives = 52/123 (42.28%), Query Frame = 2 Query: 203 CPTWSKFCCNETISD----YFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYNTHIP 559 C +CC +S +F FE RN GF+ Y ++ AT Y GFG TG + +E+ AF A +TS + P WG C +E++P+ YCD + P Sbjct: 47 CGLTVAYCCAGCVSQCRNCFFTESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYP--GFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNPNSDYCDPKTKSSYP 167 HSP 2 Score: 38.891 bits (89), Expect = 4.035e-16 Identity = 15/28 (53.57%), Postives = 19/28 (67.86%), Query Frame = 1 Query: 550 TYPCTPGAEYYARGAIPIYWNYNYGATG 633 +YPC A+YY RG + + WNYNYG G Sbjct: 165 SYPCV--ADYYGRGPLQLRWNYNYGECG 190 The following BLAST results are available for this feature:
BLAST of FC876330 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876330 ID=FC876330; Name=FC876330; organism=Citrus clementina; type=EST; length=634bpback to top |