FC920178
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFA_ARATH (Probable phenylalanyl-tRNA synthetase alpha chain OS=Arabidopsis thaliana GN=At4g39280 PE=2 SV=3) HSP 1 Score: 374.785 bits (961), Expect = 2.412e-103 Identity = 184/230 (80.00%), Postives = 196/230 (85.22%), Query Frame = 2 Query: 2 KVKDLLLPVQNGHALSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEEPFAPKKYFSIDRVFRNEAVDRTHL 691 KVK LL +Q G KE I+SLKARKLIVPQ WKGYSV+KGPNYAP+RKK ATDLTRENLQ +WKELEFKEYNF AKG P + GHLH LLKVRKQ KDIF+QMGFEEMPTNN+VESSFWNFDALFQPQQHPARDSHDTFFL+ PSTTR LPEDYVERVKRVHE +WKREEANKNLLRTHTTAVSSRML ALA++PF PKKYFSIDRVFRNEAVDRTHL Sbjct: 128 KVKGQLLQIQQGKEFDKESINSLKARKLIVPQIWKGYSVKKGPNYAPERKKVATDLTRENLQ--NWKELEFKEYNFKAKGAPVDAGHLHALLKVRKQFKDIFVQMGFEEMPTNNYVESSFWNFDALFQPQQHPARDSHDTFFLKVPSTTRTLPEDYVERVKRVHESGGYGSRGYNYDWKREEANKNLLRTHTTAVSSRMLYALAQKPFVPKKYFSIDRVFRNEAVDRTHL 355
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFA_DANRE (Phenylalanyl-tRNA synthetase alpha chain OS=Danio rerio GN=farsa PE=2 SV=2) HSP 1 Score: 268.085 bits (684), Expect = 3.179e-71 Identity = 134/232 (57.76%), Postives = 163/232 (70.26%), Query Frame = 2 Query: 5 VKDLLLPVQNGHA--LSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALA-EEPFAPKKYFSIDRVFRNEAVDRTHL 691 V+D L VQNG + L ++E + LK RKL+ T K Y + KG +++ K T+LT E + G+WKE +FK YNF A G + GHLHPL+KVR Q + IFL+MGF EMPTNNF+ESSFWNFD+LFQPQQHPARD HDTFF+ +P+ E P DY+ERVK+VH +WK EEA KNLLRTHTTAVS+RML LA +E F P KYFSIDRVFRNE +D THL Sbjct: 136 VRDKLQLVQNGQSAKLEEKEKNELKKRKLLAEVTVKSYWITKGNSFSTTITKQETELTPEMIASGNWKEKKFKPYNFEAMGVAPDCGHLHPLMKVRTQFRQIFLEMGFTEMPTNNFIESSFWNFDSLFQPQQHPARDQHDTFFISDPALAHEFPRDYLERVKKVHSEGGYGSQGYKYDWKIEEAQKNLLRTHTTAVSARMLYKLAQQEKFTPVKYFSIDRVFRNETLDATHL 367
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFA_CHICK (Phenylalanyl-tRNA synthetase alpha chain OS=Gallus gallus GN=FARSA PE=1 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 1.023e-69 Identity = 131/221 (59.28%), Postives = 158/221 (71.49%), Query Frame = 2 Query: 32 NGHALSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEE-PFAPKKYFSIDRVFRNEAVDRTHL 691 NG +LS+ E + LK RKL++ T K Y +RKG ++ + TDLT E + G W++L FK YNF+A G P GHLHPLLKVR QL+ IFL+MGF EMPT+NFVESSFWNFDALFQPQQHPARD HDTFFL++P+ ELP +Y+ RVK+VH EWK EEA KNLLRTHTT+ S+R L LA + F P KYFSIDRVFRNE++D THL Sbjct: 150 NGGSLSERERTDLKRRKLLLEVTLKSYWIRKGSAFSTAVVRQETDLTPEMIATGSWRKLPFKAYNFSALGLPPTCGHLHPLLKVRSQLRQIFLEMGFTEMPTDNFVESSFWNFDALFQPQQHPARDQHDTFFLQDPAEAPELPANYMARVKKVHSQGGYGSQGYKYEWKVEEARKNLLRTHTTSASARALYHLARQGKFTPVKYFSIDRVFRNESLDATHL 370
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFAB_XENLA (Phenylalanyl-tRNA synthetase alpha chain B OS=Xenopus laevis GN=farsa-B PE=2 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 1.929e-68 Identity = 131/232 (56.47%), Postives = 160/232 (68.97%), Query Frame = 2 Query: 5 VKDLLLPVQNGHA--LSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALA-EEPFAPKKYFSIDRVFRNEAVDRTHL 691 VK+ L + G A +++++ + LK RKL+ T K Y V KG ++ K TDLT E + G W+E +FK YNFNA G E GHLHPLLKVR Q + IFL+MGF EMPTNNF+ESSFWNFDALFQPQQHPARD HDTFFL++P+ E P +Y+ERVK+VH +W EA KN+LRTHTTAVS+RML LA ++ F P KYFSIDRVFRNE +D THL Sbjct: 137 VKEKLQLILKGRADDVNEKDKNELKKRKLVNEVTVKSYWVTKGSGFSTSITKQETDLTPEMIASGSWREKQFKGYNFNALGVMPECGHLHPLLKVRTQFRQIFLEMGFTEMPTNNFIESSFWNFDALFQPQQHPARDQHDTFFLQDPALATEFPMEYLERVKKVHSEGGYGSQGYKYDWSIHEAQKNILRTHTTAVSARMLYKLAHQKEFTPVKYFSIDRVFRNETLDATHL 368
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFA_DROME (Probable phenylalanyl-tRNA synthetase alpha chain OS=Drosophila melanogaster GN=CG2263 PE=2 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 5.611e-68 Identity = 126/221 (57.01%), Postives = 154/221 (69.68%), Query Frame = 2 Query: 35 GHALSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALA--EEPFAPKKYFSIDRVFRNEAVDRTHL 691 G L +E++ K RKL+ T K + + +GP +A K TDLT E L G W +L+FK YNF+A G P GHLHPLLKVR + + IFL+MGF EMPTNN+VESSFWNFDAL+QPQQHPARD+HDTFF+ P+ + + P+DY+ERVK+VH +WK EEA KNLLRTHTTAVS+RML LA E F KYFSID+VFRNE +D THL Sbjct: 147 GDQLPAKEVADFKKRKLLQETTTKSFVLARGPEFATTLTKLETDLTVEMLANGLWDQLKFKAYNFDALGAPPTRGHLHPLLKVRTEFRQIFLEMGFSEMPTNNYVESSFWNFDALYQPQQHPARDAHDTFFVNHPAKSHKFPQDYLERVKKVHSVGGYGSKGYGYDWKLEEAQKNLLRTHTTAVSARMLYKLANQEGGFKAAKYFSIDKVFRNETLDATHL 367
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFAA_XENLA (Phenylalanyl-tRNA synthetase alpha chain A OS=Xenopus laevis GN=farsa-A PE=2 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 7.329e-68 Identity = 130/232 (56.03%), Postives = 160/232 (68.97%), Query Frame = 2 Query: 5 VKDLLLPVQNGHA--LSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALA-EEPFAPKKYFSIDRVFRNEAVDRTHL 691 VK+ L + G A +++++ + LK RKL+ T K Y V KG ++ K TDLT E + G W+E +FK YNF+A G E GHLHPLLKVR Q + IFL+MGF EMPTNNF+ESSFWNFDALFQPQQHPARD HDTFFL++P+ E P +Y+ERVK+VH +W EA KN+LRTHTTAVS+RML LA ++ F P KYFSIDRVFRNE +D THL Sbjct: 137 VKEKLQLILKGRADDVNEKDRNELKKRKLVNEVTVKSYWVTKGSGFSTSITKQETDLTPEMIASGSWREKQFKGYNFDALGVMPECGHLHPLLKVRTQFRQIFLEMGFTEMPTNNFIESSFWNFDALFQPQQHPARDQHDTFFLQDPALATEFPMEYLERVKKVHSEGGYGSQGYKYDWSIHEAQKNILRTHTTAVSARMLYKLALQKDFTPVKYFSIDRVFRNETLDATHL 368
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFA_RAT (Phenylalanyl-tRNA synthetase alpha chain OS=Rattus norvegicus GN=Farsa PE=1 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 6.204e-67 Identity = 128/233 (54.94%), Postives = 158/233 (67.81%), Query Frame = 2 Query: 2 KVKDLLLPVQNGHA--LSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAE-EPFAPKKYFSIDRVFRNEAVDRTHL 691 +V+ L VQ G A L+++E + L+ RKL+ K Y V KG ++ K +L+ E + G W++ FK YNF+A+G + GHLHPLLKVR Q + IFL+MGF EMPT+NF+ESSFWNFDALFQPQQHPARD HDTFFL +P+ +LP DYV+RVKR H WK EEA KNLLRTHTTA S+R L LA+ +PF P KYFSIDRVFRNE +D THL Sbjct: 135 EVQRRLQQVQAGQAEKLAEKERNELRKRKLLTEVILKTYWVSKGKGFSTSVSKQEAELSPEMISSGSWRDRPFKPYNFSARGVLPDSGHLHPLLKVRSQFRQIFLEMGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDTFFLRDPAEALQLPMDYVQRVKRTHSQGGYGSQGYKYTWKLEEARKNLLRTHTTAASARALYRLAQKKPFTPAKYFSIDRVFRNETLDATHL 367
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFA_HUMAN (Phenylalanyl-tRNA synthetase alpha chain OS=Homo sapiens GN=FARSA PE=1 SV=3) HSP 1 Score: 251.521 bits (641), Expect = 3.079e-66 Identity = 128/233 (54.94%), Postives = 157/233 (67.38%), Query Frame = 2 Query: 2 KVKDLLLPVQNGHA--LSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAE-EPFAPKKYFSIDRVFRNEAVDRTHL 691 +V+ L V+ G A L ++E S L+ RKL+ T K Y V KG ++ K T+L+ E + G W++ FK YNF A G + GHLHPLLKVR Q + IFL+MGF EMPT+NF+ESSFWNFDALFQPQQHPARD HDTFFL +P+ +LP DYV+RVKR H WK +EA KNLLRTHTT+ S+R L LA+ +PF P KYFSIDRVFRNE +D THL Sbjct: 135 EVQRRLQLVRGGQAEKLGEKERSELRKRKLLAEVTLKTYWVSKGSAFSTSISKQETELSPEMISSGSWRDRPFKPYNFLAHGVLPDSGHLHPLLKVRSQFRQIFLEMGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDTFFLRDPAEALQLPMDYVQRVKRTHSQGGYGSQGYKYNWKLDEARKNLLRTHTTSASARALYRLAQKKPFTPVKYFSIDRVFRNETLDATHL 367
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFA_MOUSE (Phenylalanyl-tRNA synthetase alpha chain OS=Mus musculus GN=Farsa PE=2 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 8.958e-66 Identity = 127/233 (54.51%), Postives = 157/233 (67.38%), Query Frame = 2 Query: 2 KVKDLLLPVQNGHA--LSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAE-EPFAPKKYFSIDRVFRNEAVDRTHL 691 +V+ L VQ G A L+++E + L+ RKL+ K Y V KG ++ K +L+ E + G W++ FK YNF+A+G + GHLHPLLKVR Q + IFL+MGF EMPT+NF+ESSFWNFDALFQPQQHPARD HDTFFL +P+ +LP YV+RVKR H WK EEA KNLLRTHTTA S+R L LA+ +PF P KYFSIDRVFRNE +D THL Sbjct: 135 EVQKRLQLVQAGQAEKLAEKERNELRKRKLLTEVILKTYWVSKGKAFSTSVSKQEAELSPEMISSGSWRDRPFKPYNFSARGVLPDSGHLHPLLKVRSQFRQIFLEMGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDTFFLRDPAEALQLPMGYVQRVKRTHSQGGYGSQGYKYTWKLEEARKNLLRTHTTAASARALYQLAQKKPFTPAKYFSIDRVFRNETLDATHL 367
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFA_PONAB (Phenylalanyl-tRNA synthetase alpha chain OS=Pongo abelii GN=FARSA PE=2 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 1.528e-65 Identity = 127/233 (54.51%), Postives = 156/233 (66.95%), Query Frame = 2 Query: 2 KVKDLLLPVQNGHA--LSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAE-EPFAPKKYFSIDRVFRNEAVDRTHL 691 +V+ L V+ G A L ++E S L+ RKL+ K Y V KG ++ K T+L+ E + G W++ FK YNF A G + GHLHPLLKVR Q + IFL+MGF EMPT+NF+ESSFWNFDALFQPQQHPARD HDTFFL +P+ +LP DYV+RVKR H WK +EA KNLLRTHTT+ S+R L LA+ +PF P KYFSIDRVFRNE +D THL Sbjct: 135 EVQRRLQLVRGGQAEKLGEKERSELRKRKLLAEVILKTYWVSKGSAFSTSISKQETELSPEMISSGSWRDRPFKPYNFLAHGVLPDSGHLHPLLKVRSQFRQIFLEMGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDTFFLRDPAEALQLPMDYVQRVKRTHSQGGYGSQGYKYNWKLDEARKNLLRTHTTSASARALYRLAQKKPFTPVKYFSIDRVFRNETLDATHL 367 The following BLAST results are available for this feature:
BLAST of FC920178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920178 ID=FC920178; Name=FC920178; organism=Citrus clementina; type=EST; length=692bpback to top |