FC920178
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFA_PYRAR (Phenylalanyl-tRNA synthetase alpha chain OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=pheS PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.354e-21 Identity = 63/187 (33.69%), Postives = 94/187 (50.27%), Query Frame = 2 Query: 128 PNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEEPFAPKKYFSIDRVFRNEAVDRTH 688 P + + + T +T ++ G W+ K ++ + H + ++++ + +GFEE+ +E FWNFDALFQ Q HPAR+ HDTF++ PE +E V RVHE +W RE+A +LRT TTAV+ ++ALAE K F+I RVFR E +D H Sbjct: 172 PPESVRPAEVKTAITSADIATGRWRTYLLKPFDLGVEPPEYPAPVPHFFNEFLDYVREVMIGLGFEEV-RGPVLEVEFWNFDALFQAQDHPAREVHDTFYIRWEGPIEAPPEHLLEAVGRVHE------EKWRYKWSREKALNPVLRTQTTAVT---IRALAERGDGEYKVFTIGRVFRPEKLDPKH 348
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFA_SULAC (Phenylalanyl-tRNA synthetase alpha chain OS=Sulfolobus acidocaldarius GN=pheS PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.146e-20 Identity = 60/177 (33.90%), Postives = 95/177 (53.67%), Query Frame = 2 Query: 161 TDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEEPFAPKKYFSIDRVFRNEAVDRTHL 691 T LT E L+ DWK+ + +EYN A H ++LKD+ ++GF E+ ++E +NFD LFQ Q HPAR+ HD+F ++ + E ++ +K +HE W + A + +LR+ TTAV++R+ L+ P P K FS+ +VFR +++D THL Sbjct: 179 TQLTSELLRSKDWKKYKIREYNVEALPPYFPLAKKHFFRDFIEKLKDVMKELGFTEVNAG-YIEMELYNFDLLFQAQDHPAREIHDSFRVDGLGKIDD--ERLLKEIKEMHE------KGWKYSWDPQIAKRLVLRSQTTAVTARI---LSSRPSVPFKGFSLGKVFRPDSIDATHL 343
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFA_BORBU (Phenylalanyl-tRNA synthetase alpha chain OS=Borrelia burgdorferi GN=pheS PE=3 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 5.690e-20 Identity = 60/177 (33.90%), Postives = 87/177 (49.15%), Query Frame = 2 Query: 161 TDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNL-LRTHTTAVSSRMLKALAEEPFAPKKYFSIDRVFRNEAVDRTH 688 T LT E L+ ++ +F+ YN + G + L ++KD + +GF+E VE+ F+N DALF PQ HP+RD D +++ +PS LPE Y VK HE E+ +K L LRTH T +S++ L P +YF + R FR + VD TH Sbjct: 226 TKLTPEILKNKTYENKKFRAYNIHIPSAKTFIGRANSYLDYISKIKDKLVGLGFQEFD-GPLVETEFFNNDALFMPQFHPSRDIKDVYYISDPSMQESLPEPYFSNVKLAHETGYATGSRGWRYSFSEDLSKRLVLRTHGTVLSAKQLINAKN----PSRYFGVIRCFRYDQVDATH 397
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFA_THETH (Phenylalanyl-tRNA synthetase alpha chain OS=Thermus thermophilus GN=pheS PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.315e-13 Identity = 73/242 (30.17%), Postives = 109/242 (45.04%), Query Frame = 2 Query: 5 VKDLLLPVQNGHALSKEEISSLKARKL----IVPQTWKGYSV-------RKGP--NYAPKRKKAATDLTRENLQKGDWKE-LEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEEPFAPKKYFSIDRVFRNEAVDRTH 688 +++ L +QN L EE+ +LKAR L ++ Q KG S ++G N +AA + + L++ KE LE + + + G G LHP+ + ++L +IF +G++ + VES F+NFDAL P+ HPARD DTF+L E P E + LLRTHT+ + R + +A P P + RVFR E D TH Sbjct: 2 LEEALAAIQNARDL--EELKALKARYLGKKGLLTQEMKGLSALPLEERRKRGQELNAIKAALEAALEAREKALEEAALKEALERERVDVSLPGASLFSGGLHPITLMERELVEIFRALGYQAVEGPE-VESEFFNFDALNIPEHHPARDMWDTFWLTGEGFRLEGP------------------------LGEEVEGRLLLRTHTSPMQVRYM--VAHTP--PFRIVVPGRVFRFEQTDATH 212
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFA_THET8 (Phenylalanyl-tRNA synthetase alpha chain OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=pheS PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.315e-13 Identity = 73/242 (30.17%), Postives = 109/242 (45.04%), Query Frame = 2 Query: 5 VKDLLLPVQNGHALSKEEISSLKARKL----IVPQTWKGYSV-------RKGP--NYAPKRKKAATDLTRENLQKGDWKE-LEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEEPFAPKKYFSIDRVFRNEAVDRTH 688 +++ L +QN L EE+ +LKAR L ++ Q KG S ++G N +AA + + L++ KE LE + + + G G LHP+ + ++L +IF +G++ + VES F+NFDAL P+ HPARD DTF+L E P E + LLRTHT+ + R + +A P P + RVFR E D TH Sbjct: 2 LEEALAAIQNARDL--EELKALKARYLGKKGLLTQEMKGLSALPLEERRKRGQELNAIKAALEAALEAREKALEEAALKEALERERVDVSLPGASLFSGGLHPITLMERELVEIFRALGYQAVEGPE-VESEFFNFDALNIPEHHPARDMWDTFWLTGEGFRLEGP------------------------LGEEVEGRLLLRTHTSPMQVRYM--VAHTP--PFRIVVPGRVFRFEQTDATH 212
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFA_THET2 (Phenylalanyl-tRNA synthetase alpha chain OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=pheS PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.315e-13 Identity = 73/242 (30.17%), Postives = 109/242 (45.04%), Query Frame = 2 Query: 5 VKDLLLPVQNGHALSKEEISSLKARKL----IVPQTWKGYSV-------RKGP--NYAPKRKKAATDLTRENLQKGDWKE-LEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEEPFAPKKYFSIDRVFRNEAVDRTH 688 +++ L +QN L EE+ +LKAR L ++ Q KG S ++G N +AA + + L++ KE LE + + + G G LHP+ + ++L +IF +G++ + VES F+NFDAL P+ HPARD DTF+L E P E + LLRTHT+ + R + +A P P + RVFR E D TH Sbjct: 2 LEEALAAIQNARDL--EELKALKARYLGKKGLLTQEMKGLSALPLEERRKRGQELNAIKAALEAALEAREKALEEAALKEALERERVDVSLPGASLFSGGLHPITLMERELVEIFRALGYQAVEGPE-VESEFFNFDALNIPEHHPARDMWDTFWLAGEGFRLEGP------------------------LGEEVEGRLLLRTHTSPMQVRYM--VAHTP--PFRIVVPGRVFRFEQTDATH 212
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFA_FERNB (Phenylalanyl-tRNA synthetase alpha chain OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=pheS PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12 Identity = 57/183 (31.15%), Postives = 83/183 (45.36%), Query Frame = 2 Query: 143 KRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEEPFAPKKYFSIDRVFRNEAVDRTHL 691 ++K+ T+ +E K W + G GHLH L KVR +L+DIF+ MGF + VE+ ++NFDAL P+ HPARD HD+F+++ N++LLRTHT+ V R + L+ +P P S RV+R + D THL Sbjct: 76 EQKEKITEYEKEEAYKKLWVDPTMP-------GAIRSVGHLHILTKVRNELEDIFISMGFSVVEGPE-VETPWFNFDALNTPEWHPARDEHDSFYID---------------------------------------NEHLLRTHTSPVQIRTM--LSRKP--PLAIVSPGRVYRRD-YDATHL 206
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFA_BACWK (Phenylalanyl-tRNA synthetase alpha chain OS=Bacillus weihenstephanensis (strain KBAB4) GN=pheS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.448e-12 Identity = 46/150 (30.67%), Postives = 70/150 (46.67%), Query Frame = 2 Query: 239 GQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEEPFAPKKYFSIDRVFRNEAVDRTH 688 G+P E G HPL V +Q++D+F+ MG+E + VE ++NF+AL P+ HPARD DTF++ E + LLRTHT++V +R ++ E+ P K +V+R + D TH Sbjct: 99 GRPVETGCHHPLTAVVEQIEDVFIGMGYE-VAEGTEVEKDYYNFEALNLPKDHPARDMQDTFYITE---------------------------------------ETLLRTHTSSVQARTMEKNKEK--GPIKIICPGKVYRRDDDDATH 206
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFA_BACCN (Phenylalanyl-tRNA synthetase alpha chain OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=pheS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.448e-12 Identity = 50/171 (29.24%), Postives = 79/171 (46.20%), Query Frame = 2 Query: 179 NLQKGDWK-ELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEEPFAPKKYFSIDRVFRNEAVDRTH 688 NL+K + +L + + G+P E G HPL V +Q++D+F+ MG+E + VE ++NF+AL P+ HPARD DTF++ E + LLRTHT++V +R ++ E+ P K +V+R + D TH Sbjct: 78 NLEKAVMEAKLASETIDVTLPGRPVETGCHHPLTAVVEQIEDVFIGMGYE-VAEGTEVEKDYYNFEALNLPKDHPARDMQDTFYITE---------------------------------------ETLLRTHTSSVQARTMENNKEK--GPIKIICPGKVYRRDDDDATH 206
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFA_BACHK (Phenylalanyl-tRNA synthetase alpha chain OS=Bacillus thuringiensis subsp. konkukian GN=pheS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.728e-12 Identity = 46/150 (30.67%), Postives = 70/150 (46.67%), Query Frame = 2 Query: 239 GQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEEPFAPKKYFSIDRVFRNEAVDRTH 688 G+P E G HPL V +Q++D+F+ MG+E + VE ++NF+AL P+ HPARD DTF++ E + LLRTHT++V +R ++ E+ P K +V+R + D TH Sbjct: 99 GRPVETGCHHPLTAVVEQIEDVFIGMGYE-VAEGTEVEKDYYNFEALNLPKDHPARDMQDTFYITE---------------------------------------ETLLRTHTSSVQARTMENNKEK--GPIKIICPGKVYRRDDDDATH 206 The following BLAST results are available for this feature:
BLAST of FC920178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920178 ID=FC920178; Name=FC920178; organism=Citrus clementina; type=EST; length=692bpback to top |