FC920186

Overview
NameFC920186
Unique NameFC920186
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12599 contig Ccv1_Contig12599:46..734. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: CARP_NANOT (Vacuolar protease A OS=Nannizzia otae (strain CBS 113480) GN=PEP2 PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.292e-36
Identity = 70/123 (56.91%), Postives = 90/123 (73.17%), Query Frame = 2
Query:  293 VALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            V + N+++AQYF EI IGTPPQ F V+ DTGSSNLWVP   C  SIAC+ HS Y S  SST+ +NG S  I YG+G++ GF S+D+V+IGD+ +K+Q F EAT EP L F   +FDGILG+G+
Sbjct:   77 VLIDNFLNAQYFSEISIGTPPQTFKVVLDTGSSNLWVPGKDCS-SIACFLHSTYDSSASSTFTRNGTSFAIRYGSGSLEGFVSQDNVQIGDMKIKNQLFAEATSEPGLAFAFGRFDGILGMGY 198          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: NAPSA_MOUSE (Napsin-A OS=Mus musculus GN=Napsa PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 9.578e-36
Identity = 72/129 (55.81%), Postives = 92/129 (71.32%), Query Frame = 2
Query:  278 GDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC-YFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            G+   V L  +M+ QYFG IG+GTPPQNFTV+FDTGSSNLWVPS++C +FS+AC+FH ++    SS+++ NG    I YGTG +SG  S+D++ IG +      F EA  EPSL F LA FDGILGLGF
Sbjct:   58 GNPSFVPLSKFMNTQYFGTIGLGTPPQNFTVVFDTGSSNLWVPSTRCHFFSLACWFHHRFNPKASSSFRPNGTKFAIQYGTGRLSGILSQDNLTIGGIHDAFVTFGEALWEPSLIFALAHFDGILGLGF 186          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: RENI1_MOUSE (Renin-1 OS=Mus musculus GN=Ren1 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.208e-35
Identity = 71/124 (57.26%), Postives = 88/124 (70.97%), Query Frame = 2
Query:  293 VALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC-YFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            V L NY++ QY+GEIGIGTPPQ F VIFDTGS+NLWVPS+KC    +AC  HS Y S  SS+Y +NG    IHYG+G + GF S+D V +G + V  Q F E T  P + F+LAKFDG+LG+GF
Sbjct:   74 VVLTNYLNTQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSRLYLACGIHSLYESSDSSSYMENGSDFTIHYGSGRVKGFLSQDSVTVGGITV-TQTFGEVTELPLIPFMLAKFDGVLGMGF 196          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: RENI2_MOUSE (Renin-2 OS=Mus musculus GN=Ren2 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.806e-34
Identity = 70/124 (56.45%), Postives = 89/124 (71.77%), Query Frame = 2
Query:  293 VALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC-YFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            V L NY+++QY+GEIGIGTPPQ F VIFDTGS+NLWVPS+KC    +AC  HS Y S  SS+Y +NG    IHYG+G + GF S+D V +G + V  Q F E T  P + F+LA+FDG+LG+GF
Sbjct:   73 VVLTNYLNSQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSRLYLACGIHSLYESSDSSSYMENGDDFTIHYGSGRVKGFLSQDSVTVGGITV-TQTFGEVTELPLIPFMLAQFDGVLGMGF 195          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: NAPSA_HUMAN (Napsin-A OS=Homo sapiens GN=NAPSA PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.806e-34
Identity = 74/130 (56.92%), Postives = 87/130 (66.92%), Query Frame = 2
Query:  278 GDADI-VALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC-YFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            GD  I V L NY D QYFGEIG+GTPPQNFTV FDTGSSNLWVPS +C +FS+ C+ H ++    SS+++ NG    I YGTG + G  SED + IG +      F EA  EPSL F  A FDGILGLGF
Sbjct:   62 GDKPIFVPLSNYRDVQYFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLHHRFDPKASSSFQANGTKFAIQYGTGRVDGILSEDKLTIGGIKGASVIFGEALWEPSLVFAFAHFDGILGLGF 191          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: CARPV_CANAL (Vacuolar aspartic protease OS=Candida albicans GN=APR1 PE=3 SV=3)

HSP 1 Score: 145.976 bits (367), Expect = 1.806e-34
Identity = 71/121 (58.68%), Postives = 85/121 (70.25%), Query Frame = 2
Query:  299 LKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            L NY++AQYF EI IGTP Q F VI DTGSSNLWVPS  C  S+AC+ H+KY    SSTYK NG    I YG+G++ G+ S+D + IGDLV+  Q+F EAT EP L F   KFDGILGL +
Sbjct:   96 LTNYLNAQYFTEIQIGTPGQPFKVILDTGSSNLWVPSQDCT-SLACFLHAKYDHDASSTYKVNGSEFSIQYGSGSMEGYISQDVLTIGDLVIPGQDFAEATSEPGLAFAFGKFDGILGLAY 215          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: CATEB_XENLA (Cathepsin E-B OS=Xenopus laevis GN=ctse-B PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.024e-34
Identity = 71/129 (55.04%), Postives = 89/129 (68.99%), Query Frame = 2
Query:  299 LKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQRFLFESC 685
            L NYMD QYFGEI IGTPPQNFTVIFDTGSSNLWVPS  C  S AC  H++++   SSTY+ NG +  + YGTG++SG    D V +  ++V++Q+F E+  EP  TF+ A FDGILGLG+       C
Sbjct:   66 LINYMDVQYFGEISIGTPPQNFTVIFDTGSSNLWVPSVYC-ISPACAQHNRFQPQLSSTYESNGNNFSLQYGTGSLSGVIGIDSVTVEGILVQNQQFGESVSEPGSTFVDASFDGILGLGYPSIAVGGC 193          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: RENI_RAT (Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 6.864e-34
Identity = 70/124 (56.45%), Postives = 87/124 (70.16%), Query Frame = 2
Query:  293 VALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC-YFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            V L NY+D QY+GEIGIGTP Q F VIFDTGS+NLWVPS+KC     AC  H+ Y S  SS+Y +NG    IHYG+G + GF S+D V +G ++V  Q F E T  P + F+LAKFDG+LG+GF
Sbjct:   74 VVLTNYLDTQYYGEIGIGTPSQTFKVIFDTGSANLWVPSTKCGPLYTACEIHNLYDSSESSSYMENGTEFTIHYGSGKVKGFLSQDVVTVGGIIV-TQTFGEVTELPLIPFMLAKFDGVLGMGF 196          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: RENI_PANTR (Renin OS=Pan troglodytes GN=REN PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.864e-34
Identity = 81/172 (47.09%), Postives = 107/172 (62.21%), Query Frame = 2
Query:  149 RIGLKKRKFDLNNRVAARLDSKEGESFRTSIRKYSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC-YFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            R  LK+R  D+     ARL    G  +   +++ +L GN   S     V L NYMD QY+GEIGIGTPPQ F V+FDTGSSN+WVPSSKC     AC +H  + +  SS+YK NG    + Y TG +SGF S+D + +G + V  Q F E T  P+L F+LA+FDG++G+GF
Sbjct:   43 RESLKERGVDM-----ARL----GPEWSQPMKRLTL-GNTTSS-----VILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGF 198          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: RENI_MACMU (Renin OS=Macaca mulatta GN=REN PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 6.864e-34
Identity = 81/172 (47.09%), Postives = 107/172 (62.21%), Query Frame = 2
Query:  149 RIGLKKRKFDLNNRVAARLDSKEGESFRTSIRKYSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC-YFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            R  LK+R  D+     ARL    G  +   +++ +L GN   S     V L NYMD QY+GEIGIGTPPQ F V+FDTGSSN+WVPSSKC     AC +H  + +  SS+YK NG    + Y TG +SGF S+D + +G + V  Q F E T  P+L F+LA+FDG++G+GF
Sbjct:   43 RESLKERGVDM-----ARL----GPEWSQPMKRLAL-GNTTSS-----VILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGF 198          
The following BLAST results are available for this feature:
BLAST of FC920186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
CARP_NANOT3.292e-3656.91Vacuolar protease A OS=Nannizzia otae (strain CBS ... [more]
NAPSA_MOUSE9.578e-3655.81Napsin-A OS=Mus musculus GN=Napsa PE=1 SV=1[more]
RENI1_MOUSE6.208e-3557.26Renin-1 OS=Mus musculus GN=Ren1 PE=1 SV=1[more]
RENI2_MOUSE1.806e-3456.45Renin-2 OS=Mus musculus GN=Ren2 PE=1 SV=1[more]
NAPSA_HUMAN1.806e-3456.92Napsin-A OS=Homo sapiens GN=NAPSA PE=1 SV=1[more]
CARPV_CANAL1.806e-3458.68Vacuolar aspartic protease OS=Candida albicans GN=... [more]
CATEB_XENLA4.024e-3455.04Cathepsin E-B OS=Xenopus laevis GN=ctse-B PE=2 SV=... [more]
RENI_RAT6.864e-3456.45Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2[more]
RENI_PANTR6.864e-3447.09Renin OS=Pan troglodytes GN=REN PE=3 SV=1[more]
RENI_MACMU6.864e-3447.09Renin OS=Macaca mulatta GN=REN PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC32005B02EF RVDevelop1 Citrus clementina cDNA clone C32005B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920186 ID=FC920186; Name=FC920186; organism=Citrus clementina; type=EST; length=690bp
GTCTGCTCCAAGCATTTCTCTGTCTCGATCATCGAAAGAGACTTTACTTG
TCAACATGGGAACGGTATTCAAATCTATTACAGCCGGTTTCTTCCTTTGT
TTGCTTCTGTTTCCTGTGGTGTTCTCGACACCAAACGGTGGGTTATACAG
AATCGGACTTAAAAAGAGGAAGTTTGACCTGAACAACAGAGTGGCTGCCC
GCCTTGACTCCAAGGAAGGAGAGTCATTCAGAACTTCTATCAGAAAATAT
TCTCTTCGTGGAAACTTAGGAGAGTCAGGGGATGCTGATATTGTTGCGCT
GAAGAACTACATGGATGCTCAGTACTTTGGTGAGATTGGTATTGGCACAC
CCCCGCAAAATTTCACTGTGATATTTGACACTGGTAGTTCAAATTTGTGG
GTGCCCTCTTCTAAGTGTTATTTCTCGATTGCATGCTATTTCCATTCCAA
GTACAGGTCAGGCCGCTCAAGTACCTACAAGAAGAATGGTAAATCGGCTG
ATATCCATTATGGAACTGGAGCTATTTCTGGTTTTTTTAGCGAAGACCAT
GTCAAAATCGGTGATCTTGTGGTCAAAGATCAGGAATTTATTGAGGCAAC
TAGGGAGCCCAGCCTCACTTTCTTGCTGGCCAAGTTTGATGGCATACTTG
GACTTGGCTTCCAGAGATTTCTGTTTGAAAGCTGTGCCCG
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