FC920186

Overview
NameFC920186
Unique NameFC920186
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12599 contig Ccv1_Contig12599:46..734. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: RENI_MACFA (Renin OS=Macaca fascicularis GN=REN PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.864e-34
Identity = 81/172 (47.09%), Postives = 107/172 (62.21%), Query Frame = 2
Query:  149 RIGLKKRKFDLNNRVAARLDSKEGESFRTSIRKYSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC-YFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            R  LK+R  D+     ARL    G  +   +++ +L GN   S     V L NYMD QY+GEIGIGTPPQ F V+FDTGSSN+WVPSSKC     AC +H  + +  SS+YK NG    + Y TG +SGF S+D + +G + V  Q F E T  P+L F+LA+FDG++G+GF
Sbjct:   43 RESLKERGVDM-----ARL----GPEWSQPMKRLAL-GNTTSS-----VILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGF 198          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: RENI_HUMAN (Renin OS=Homo sapiens GN=REN PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.864e-34
Identity = 81/172 (47.09%), Postives = 107/172 (62.21%), Query Frame = 2
Query:  149 RIGLKKRKFDLNNRVAARLDSKEGESFRTSIRKYSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC-YFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            R  LK+R  D+     ARL    G  +   +++ +L GN   S     V L NYMD QY+GEIGIGTPPQ F V+FDTGSSN+WVPSSKC     AC +H  + +  SS+YK NG    + Y TG +SGF S+D + +G + V  Q F E T  P+L F+LA+FDG++G+GF
Sbjct:   43 RESLKERGVDM-----ARL----GPEWSQPMKRLTL-GNTTSS-----VILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGF 198          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: RENI_CALJA (Renin OS=Callithrix jacchus GN=REN PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.864e-34
Identity = 68/124 (54.84%), Postives = 87/124 (70.16%), Query Frame = 2
Query:  293 VALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC-YFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            V L NYMD QY+GEIGIGTPPQ F V+FDTGSSN+WVPSSKC     AC +H  + +  SS+YK NG    + Y TG +SGF S+D + +G + V  Q F E T  P+L F+LA+FDG++G+GF
Sbjct:   70 VILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDVITVGGITV-TQTFGEVTEMPALPFMLAEFDGVVGMGF 192          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: CATEA_XENLA (Cathepsin E-A OS=Xenopus laevis GN=ctse-A PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.529e-33
Identity = 69/129 (53.49%), Postives = 89/129 (68.99%), Query Frame = 2
Query:  299 LKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQRFLFESC 685
            L NYMD +YFGEI +GTPPQNFTVIFDTGSSNLWVPS  C  S AC  H +++   SSTY+ NG +  + YGTG++SG    D V +  ++V++Q+F E+  EP  TF+ A+FDGILGLG+       C
Sbjct:   66 LINYMDVEYFGEISVGTPPQNFTVIFDTGSSNLWVPSVYC-ISQACAQHDRFQPQLSSTYESNGNNFSLQYGTGSLSGVIGIDAVTVEGILVQNQQFGESVSEPGSTFVDAEFDGILGLGYPSIAVGDC 193          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: RENI_CANFA (Renin OS=Canis familiaris GN=REN PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.608e-33
Identity = 69/133 (51.88%), Postives = 87/133 (65.41%), Query Frame = 2
Query:  266 LGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCY-FSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            L        V L NY+D QY+GEIGIGTPPQ F V+FDTGS+NLWVPS++C     AC  H  Y S  SS+Y +NG +  I YG+G + GF S+D V +G + V  Q F E T  P + F+LAKFDG+LG+GF
Sbjct:   66 LSSGNSTSPVVLTNYLDTQYYGEIGIGTPPQTFKVVFDTGSANLWVPSTRCSPLYTACEIHCLYDSSESSSYMENGTTFTIRYGSGKVKGFLSQDMVTVGGITV-TQTFGEVTELPLIPFMLAKFDGVLGMGF 197          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: RENI_SHEEP (Renin OS=Ovis aries GN=REN PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.407e-33
Identity = 71/124 (57.26%), Postives = 86/124 (69.35%), Query Frame = 2
Query:  293 VALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCY-FSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            V L NY+D QY+GEIGIGTPPQ F VIFDTGS+NLWVPS+KC     AC  HS Y S  SS+Y +NG    I+YG+G + GF S+D V +G + V  Q F E T  P   F+LAKFDG+LG+GF
Sbjct:   70 VVLTNYLDTQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSPLYTACEIHSLYDSLESSSYVENGTEFTIYYGSGKVKGFLSQDLVTVGGITV-TQTFGEVTELPLRPFMLAKFDGVLGMGF 192          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: CATE_HUMAN (Cathepsin E OS=Homo sapiens GN=CTSE PE=1 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 6.425e-32
Identity = 78/181 (43.09%), Postives = 112/181 (61.88%), Query Frame = 2
Query:  137 GGLYRIGLKKRKFDLNNRVAARLDSKE-GESFRTSIRKYSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHV-----KIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            G L+R+ L++    L  ++ AR    E  +S    + +++   ++ +S    ++   NY+D +YFG I IG+PPQNFTVIFDTGSSNLWVPS  C  S AC  HS+++  +SSTY + G+S  I YGTG++SG    D V     ++  L V  Q+F E+  EP  TF+ A+FDGILGLG+
Sbjct:   19 GSLHRVPLRRHP-SLKKKLRARSQLSEFWKSHNLDMIQFTESCSMDQSAKEPLI---NYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYC-TSPACKTHSRFQPSQSSTYSQPGQSFSIQYGTGSLSGIIGADQVSAFATQVEGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGY 194          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: CATE_RANCA (Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.391e-32
Identity = 78/186 (41.94%), Postives = 102/186 (54.84%), Query Frame = 2
Query:  140 GLYRIGLKK----RKFDLNNRVAARLDSKEGESFRTSIRKYSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQRFLFESC 685
            G+ R+ LK+    RK        + L +K+G  F       S      E        L NY+D +YFG+I IGTPPQ FTVIFDTGSSNLWVPS  C  S AC  H++YR   S+TY  NG++  I YGTG ++G    D V +  + V+ Q F E+  EP  TF  + FDGILGL +     ++C
Sbjct:   16 GIIRVPLKRQKSMRKILKEKGKLSHLWTKQGNEFLQLSDSCSSPETASEP-------LMNYLDVEYFGQISIGTPPQQFTVIFDTGSSNLWVPSIYCT-SQACTKHNRYRPSESTTYVSNGEAFFIQYGTGNLTGILGIDQVTVQGITVQSQTFAESVSEPGSTFQDSNFDGILGLAYPNLAVDNC 193          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: PEPA1_RABIT (Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.096e-31
Identity = 73/165 (44.24%), Postives = 98/165 (59.39%), Query Frame = 2
Query:  239 IRKYSLRGNLGESG------------------------DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            +RK SLR NL E G                             +L+NY+DA+YFG I IGTPPQ FTVIFDTGSSNLWVPS+ C  S+AC+ H ++    SST++   ++  I YGTG+++G    D VK+G++   +Q F  +  EP +TFL+A FDGILGL +
Sbjct:   23 VRKKSLRKNLIEKGLLQDYLKTHTPNLATKYFPKETFASVSTESLENYLDAEYFGTISIGTPPQEFTVIFDTGSSNLWVPSTYC-SSLACFLHKRFNPDDSSTFQATSETLSITYGTGSMTGILGYDTVKVGNIEDTNQIFGLSKTEPGITFLVAPFDGILGLAY 186          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: PEPA2_RABIT (Pepsin II-2/3 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.431e-31
Identity = 66/122 (54.10%), Postives = 87/122 (71.31%), Query Frame = 2
Query:  296 ALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            +++NY+DA+YFG I IGTPPQ+FTVIFDTGSSNLWVPS+ C  S+AC  H ++    SSTY+   ++  I YGTG+++G    D VK+G +   +Q F  +  EPSLTFL A FDGILGL +
Sbjct:   66 SMENYLDAEYFGTISIGTPPQDFTVIFDTGSSNLWVPSTYC-SSLACALHKRFNPEDSSTYQGTSETLSITYGTGSMTGILGYDTVKVGSIEDTNQIFGLSKTEPSLTFLFAPFDGILGLAY 186          
The following BLAST results are available for this feature:
BLAST of FC920186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
RENI_MACFA6.864e-3447.09Renin OS=Macaca fascicularis GN=REN PE=2 SV=1[more]
RENI_HUMAN6.864e-3447.09Renin OS=Homo sapiens GN=REN PE=1 SV=1[more]
RENI_CALJA6.864e-3454.84Renin OS=Callithrix jacchus GN=REN PE=2 SV=1[more]
CATEA_XENLA1.529e-3353.49Cathepsin E-A OS=Xenopus laevis GN=ctse-A PE=1 SV=... [more]
RENI_CANFA2.608e-3351.88Renin OS=Canis familiaris GN=REN PE=2 SV=1[more]
RENI_SHEEP3.407e-3357.26Renin OS=Ovis aries GN=REN PE=2 SV=1[more]
CATE_HUMAN6.425e-3243.09Cathepsin E OS=Homo sapiens GN=CTSE PE=1 SV=2[more]
CATE_RANCA8.391e-3241.94Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1[more]
PEPA1_RABIT1.096e-3144.24Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1[more]
PEPA2_RABIT1.431e-3154.10Pepsin II-2/3 OS=Oryctolagus cuniculus PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32005B02EF RVDevelop1 Citrus clementina cDNA clone C32005B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920186 ID=FC920186; Name=FC920186; organism=Citrus clementina; type=EST; length=690bp
GTCTGCTCCAAGCATTTCTCTGTCTCGATCATCGAAAGAGACTTTACTTG
TCAACATGGGAACGGTATTCAAATCTATTACAGCCGGTTTCTTCCTTTGT
TTGCTTCTGTTTCCTGTGGTGTTCTCGACACCAAACGGTGGGTTATACAG
AATCGGACTTAAAAAGAGGAAGTTTGACCTGAACAACAGAGTGGCTGCCC
GCCTTGACTCCAAGGAAGGAGAGTCATTCAGAACTTCTATCAGAAAATAT
TCTCTTCGTGGAAACTTAGGAGAGTCAGGGGATGCTGATATTGTTGCGCT
GAAGAACTACATGGATGCTCAGTACTTTGGTGAGATTGGTATTGGCACAC
CCCCGCAAAATTTCACTGTGATATTTGACACTGGTAGTTCAAATTTGTGG
GTGCCCTCTTCTAAGTGTTATTTCTCGATTGCATGCTATTTCCATTCCAA
GTACAGGTCAGGCCGCTCAAGTACCTACAAGAAGAATGGTAAATCGGCTG
ATATCCATTATGGAACTGGAGCTATTTCTGGTTTTTTTAGCGAAGACCAT
GTCAAAATCGGTGATCTTGTGGTCAAAGATCAGGAATTTATTGAGGCAAC
TAGGGAGCCCAGCCTCACTTTCTTGCTGGCCAAGTTTGATGGCATACTTG
GACTTGGCTTCCAGAGATTTCTGTTTGAAAGCTGTGCCCG
back to top