FC920186

Overview
NameFC920186
Unique NameFC920186
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12599 contig Ccv1_Contig12599:46..734. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: PEPA4_RABIT (Pepsin II-4 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.441e-31
Identity = 66/122 (54.10%), Postives = 86/122 (70.49%), Query Frame = 2
Query:  296 ALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            +L+NY+DA+YFG I IGTPPQ+FTVIFDTGSSNLWVPS+ C  S+AC  H ++    SSTY+   ++  I YGTG+++G    D VK+G +   +Q F  +  EP LTFL A FDGILGL +
Sbjct:   66 SLENYLDAEYFGTISIGTPPQDFTVIFDTGSSNLWVPSTYC-SSLACALHKRFNPEDSSTYQGTSETLSITYGTGSMTGILGYDTVKVGSIEDTNQIFGLSKTEPGLTFLFAPFDGILGLAY 186          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: CATE_MOUSE (Cathepsin E OS=Mus musculus GN=Ctse PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.441e-31
Identity = 76/176 (43.18%), Postives = 105/176 (59.66%), Query Frame = 2
Query:  137 GGLYRIGLKKRKFDLNNRVAARLDSKE-GESFRTSIRKYSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            G L+R+ L++ +  L  ++ A+    E   S    + + S   N+  S +  ++   NY+D +YFG I IGTPPQNFTVIFDTGSSNLWVPS  C  S AC  H  +   +S TY + G    I YGTG+++G    D V +  L V  Q+F E+ +EP  TF+ A+FDGILGLG+
Sbjct:   20 GALHRVPLRRHQ-SLRKKLRAQGQLSEFWRSHNLDMTRLSESCNVYSSVNEPLI---NYLDMEYFGTISIGTPPQNFTVIFDTGSSNLWVPSVYC-TSPACKAHPVFHPSQSDTYTEVGNHFSIQYGTGSLTGIIGADQVSVEGLTVDGQQFGESVKEPGQTFVNAEFDGILGLGY 190          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: CATE_CAVPO (Cathepsin E OS=Cavia porcellus GN=CTSE PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.188e-31
Identity = 67/121 (55.37%), Postives = 83/121 (68.60%), Query Frame = 2
Query:  299 LKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            L NY+D +YFG I IG+PPQNFTVIFDTGSSNLWVPS  C  S AC  H  +    SSTY++ G S  I YGTG+++G    D V +  L V  Q+F E+ +EP  TF+ A+FDGILGLG+
Sbjct:   66 LINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCT-SPACQTHPVFHPSLSSTYREVGNSFSIQYGTGSLTGIIGADQVSVEGLTVVGQQFGESVQEPGKTFVHAEFDGILGLGY 185          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: PEPC_CALJA (Gastricsin OS=Callithrix jacchus GN=PGC PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.103e-31
Identity = 63/119 (52.94%), Postives = 83/119 (69.75%), Query Frame = 2
Query:  305 NYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            +YMDA YFGEI IGTPPQNF V+FDTGSSNLWVPS  C  S AC  HS++    SSTY  NG++  + YG+G+++GFF  D + +  + V +QEF  +  EP   F+ A+FDGI+GL +
Sbjct:   67 DYMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSASSTYSSNGQTFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAY 184          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: PEPC_MACFU (Gastricsin (Fragment) OS=Macaca fuscata fuscata GN=PGC PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 9.277e-31
Identity = 63/118 (53.39%), Postives = 82/118 (69.49%), Query Frame = 2
Query:  308 YMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            YMDA YFGEI IGTPPQNF V+FDTGSSNLWVPS  C  S AC  HS++    SSTY  NG++  + YG+G+++GFF  D + +  + V +QEF  +  EP   F+ A+FDGI+GL +
Sbjct:   57 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAY 173          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: PEPC_HUMAN (Gastricsin OS=Homo sapiens GN=PGC PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.277e-31
Identity = 63/118 (53.39%), Postives = 82/118 (69.49%), Query Frame = 2
Query:  308 YMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            YMDA YFGEI IGTPPQNF V+FDTGSSNLWVPS  C  S AC  HS++    SSTY  NG++  + YG+G+++GFF  D + +  + V +QEF  +  EP   F+ A+FDGI+GL +
Sbjct:   68 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAY 184          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: CATE_RABIT (Cathepsin E OS=Oryctolagus cuniculus GN=CTSE PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.067e-30
Identity = 73/176 (41.48%), Postives = 109/176 (61.93%), Query Frame = 2
Query:  137 GGLYRIGLKKRKFDLNNRVAARLDSKE-GESFRTSIRKYSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            G L R+ L+++   L  ++ A+    E  ++ +  + +Y+    + +S +  ++   NY+D +YFG I IG+PPQNFTVIFDT SSNLWVPS  C  S AC  H ++R  +S+TY + G    I YGTG+++G    D V +  L V  Q+F E+ +EP  TF+ A+FDGILGLG+
Sbjct:   19 GTLDRVPLRRQP-SLRKKLRAQGQLSEFWKAHKVDMVQYTETCTMEQSANEPLI---NYLDMEYFGTISIGSPPQNFTVIFDTVSSNLWVPSVYCT-SPACQMHPQFRPSQSNTYSEVGTPFSIAYGTGSLTGIIGADQVSVQGLTVVGQQFGESVKEPGQTFVNAEFDGILGLGY 189          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: PEPC_SUNMU (Gastricsin OS=Suncus murinus GN=PGC PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 2.699e-30
Identity = 61/118 (51.69%), Postives = 83/118 (70.34%), Query Frame = 2
Query:  308 YMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            YMDA YFGEI IGTPPQNF V+FDTGSSNLWVPS  C  S AC  H+++   +SSTY  NG++  + YG+G+++GFF  D + + ++ V  QEF  +  EP   F+ A+FDGI+G+ +
Sbjct:   68 YMDASYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTGHARFNPNQSSTYSTNGQTFSLQYGSGSLTGFFGYDTMTVQNIKVPHQEFGLSQNEPGTNFIYAQFDGIMGMAY 184          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: PEPC_MOUSE (Gastricsin OS=Mus musculus GN=Pgc PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.604e-30
Identity = 73/178 (41.01%), Postives = 105/178 (58.99%), Query Frame = 2
Query:  143 LYRIGLKKRKFDLNNRVAARLDSKEGESFRTSIRKYSL----RGNLGESGDADIV-ALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            L R+ LKK K       + R   KE    +  ++ +      + + G+ GD  ++     YMDA Y+GEI IGTPPQNF V+FDTGSSNLWV S  C  S AC  H++Y   +SSTY   G++  + YGTG+++GFF  D +++  + V +QEF  +  EP   F+ A+FDGI+GL +
Sbjct:   18 LIRVPLKKMK-------SIRETMKEQGVLKDFLKNHKYDPGQKYHFGKFGDYSVLYEPMAYMDASYYGEISIGTPPQNFLVLFDTGSSNLWVSSVYCQ-SEACTTHTRYNPSKSSTYYTQGQTFSLQYGTGSLTGFFGYDTLRVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAY 187          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: CATE_RAT (Cathepsin E OS=Rattus norvegicus GN=Ctse PE=1 SV=3)

HSP 1 Score: 130.954 bits (328), Expect = 6.013e-30
Identity = 64/121 (52.89%), Postives = 82/121 (67.77%), Query Frame = 2
Query:  299 LKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            L NY+D +YFG + IG+P QNFTVIFDTGSSNLWVPS  C  S AC  H  +   +SSTY + G    I YGTG+++G    D V +  L V+ Q+F E+ +EP  TF+ A+FDGILGLG+
Sbjct:   72 LINYLDMEYFGTVSIGSPSQNFTVIFDTGSSNLWVPSVYCT-SPACKAHPVFHPSQSSTYMEVGNHFSIQYGTGSLTGIIGADQVSVEGLTVEGQQFGESVKEPGQTFVNAEFDGILGLGY 191          
The following BLAST results are available for this feature:
BLAST of FC920186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
PEPA4_RABIT2.441e-3154.10Pepsin II-4 OS=Oryctolagus cuniculus PE=2 SV=1[more]
CATE_MOUSE2.441e-3143.18Cathepsin E OS=Mus musculus GN=Ctse PE=1 SV=1[more]
CATE_CAVPO3.188e-3155.37Cathepsin E OS=Cavia porcellus GN=CTSE PE=1 SV=1[more]
PEPC_CALJA7.103e-3152.94Gastricsin OS=Callithrix jacchus GN=PGC PE=1 SV=1[more]
PEPC_MACFU9.277e-3153.39Gastricsin (Fragment) OS=Macaca fuscata fuscata GN... [more]
PEPC_HUMAN9.277e-3153.39Gastricsin OS=Homo sapiens GN=PGC PE=1 SV=1[more]
CATE_RABIT2.067e-3041.48Cathepsin E OS=Oryctolagus cuniculus GN=CTSE PE=2 ... [more]
PEPC_SUNMU2.699e-3051.69Gastricsin OS=Suncus murinus GN=PGC PE=1 SV=2[more]
PEPC_MOUSE4.604e-3041.01Gastricsin OS=Mus musculus GN=Pgc PE=2 SV=1[more]
CATE_RAT6.013e-3052.89Cathepsin E OS=Rattus norvegicus GN=Ctse PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionC32005B02EF RVDevelop1 Citrus clementina cDNA clone C32005B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920186 ID=FC920186; Name=FC920186; organism=Citrus clementina; type=EST; length=690bp
GTCTGCTCCAAGCATTTCTCTGTCTCGATCATCGAAAGAGACTTTACTTG
TCAACATGGGAACGGTATTCAAATCTATTACAGCCGGTTTCTTCCTTTGT
TTGCTTCTGTTTCCTGTGGTGTTCTCGACACCAAACGGTGGGTTATACAG
AATCGGACTTAAAAAGAGGAAGTTTGACCTGAACAACAGAGTGGCTGCCC
GCCTTGACTCCAAGGAAGGAGAGTCATTCAGAACTTCTATCAGAAAATAT
TCTCTTCGTGGAAACTTAGGAGAGTCAGGGGATGCTGATATTGTTGCGCT
GAAGAACTACATGGATGCTCAGTACTTTGGTGAGATTGGTATTGGCACAC
CCCCGCAAAATTTCACTGTGATATTTGACACTGGTAGTTCAAATTTGTGG
GTGCCCTCTTCTAAGTGTTATTTCTCGATTGCATGCTATTTCCATTCCAA
GTACAGGTCAGGCCGCTCAAGTACCTACAAGAAGAATGGTAAATCGGCTG
ATATCCATTATGGAACTGGAGCTATTTCTGGTTTTTTTAGCGAAGACCAT
GTCAAAATCGGTGATCTTGTGGTCAAAGATCAGGAATTTATTGAGGCAAC
TAGGGAGCCCAGCCTCACTTTCTTGCTGGCCAAGTTTGATGGCATACTTG
GACTTGGCTTCCAGAGATTTCTGTTTGAAAGCTGTGCCCG
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