FC920186

Overview
NameFC920186
Unique NameFC920186
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12599 contig Ccv1_Contig12599:46..734. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: PEPC_RHIFE (Gastricsin OS=Rhinolophus ferrumequinum GN=PGC PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.853e-30
Identity = 60/118 (50.85%), Postives = 83/118 (70.34%), Query Frame = 2
Query:  308 YMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            YMDA YFGEI IGTPPQNF V+FDTGSSNLWVPS  C  + AC  H+++   +SSTY  NG++  + YG+G+++GFF  D + +  + V +QEF  +  EP   F+ A+FDGI+G+ +
Sbjct:   68 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-TQACTGHTRFNPSQSSTYSTNGQTFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGMAY 184          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: PEPC_CAVPO (Gastricsin OS=Cavia porcellus GN=PGC PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.853e-30
Identity = 68/141 (48.23%), Postives = 93/141 (65.96%), Query Frame = 2
Query:  242 RKYSLRGNLGESGDADIV-ALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            RK+  R  L ++GD  ++    +YMDA YFG+I +GTPPQ+F V+FDTGSSNLWVPS  C  S+AC  H+++    SSTY    +S  + YGTG+++G F  D + I D+ V  QEF  +  EP   F+ A+FDGILGLG+
Sbjct:   52 RKF-FRNRLAKTGDFSVLYEPMSYMDAAYFGQISLGTPPQSFQVLFDTGSSNLWVPSVYCS-SLACTTHTRFNPRDSSTYVATDQSFSLEYGTGSLTGVFGYDTMTIQDIQVPKQEFGLSETEPGSDFVYAEFDGILGLGY 190          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: PEPC_SORUN (Gastricsin OS=Sorex unguiculatus GN=PGC PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.750e-29
Identity = 60/118 (50.85%), Postives = 83/118 (70.34%), Query Frame = 2
Query:  308 YMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            Y+DA YFGEI IGTPPQNF V+FDTGSSNLWVPS  C  S AC  H+++   +SSTY  NG++  + YG+G+++GFF  D + + ++ V  QEF  +  EP   F+ A+FDGI+G+ +
Sbjct:   68 YLDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTGHARFNPSKSSTYSTNGQTFSLQYGSGSLTGFFGYDTMTLQNIKVPHQEFGLSQNEPGENFVYAQFDGIMGMAY 184          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: PEPC_RAT (Gastricsin OS=Rattus norvegicus GN=Pgc PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.285e-29
Identity = 61/118 (51.69%), Postives = 81/118 (68.64%), Query Frame = 2
Query:  308 YMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            YMDA YFGEI IGTPPQNF V+FDTGSSNLWV S  C  S AC  H+++   +SSTY   G++  + YGTG+++GFF  D + +  + V +QEF  +  EP   F+ A+FDGI+GL +
Sbjct:   71 YMDASYFGEISIGTPPQNFLVLFDTGSSNLWVSSVYCQ-SEACTTHARFNPSKSSTYYTEGQTFSLQYGTGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAY 187          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: PEPA4_MACFU (Pepsin A-4 OS=Macaca fuscata fuscata GN=PGA PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.285e-29
Identity = 73/166 (43.98%), Postives = 91/166 (54.82%), Query Frame = 2
Query:  239 IRKYSLRGNLGESGDA-------------------------DIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            +RK SLR NL E G                           D   L+NY+D +YFG IGIGTP QNFTV+FDTGSSNLWVPS  CY S+AC  H+ +    SSTY+   K+  I YGTG+++G    D VK+G +   +Q F  +  EP      A FDGILGL +
Sbjct:   23 VRKKSLRRNLSEHGLLKDFLKKHNLNPASKYFPQAEAPTLIDEQPLENYLDVEYFGTIGIGTPAQNFTVVFDTGSSNLWVPSVYCY-SLACMDHNLFNPQDSSTYRATSKTVSITYGTGSMTGILGYDTVKVGGISDTNQIFGLSETEPGFFLYFAPFDGILGLAY 187          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: PEPE_CHICK (Embryonic pepsinogen OS=Gallus gallus PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.481e-28
Identity = 63/121 (52.07%), Postives = 79/121 (65.29%), Query Frame = 2
Query:  299 LKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            L N +D +Y+G I IGTPPQ+FTV+FDTGSSNLWVPS  C  S AC  H  +   +SSTYK  G++  IHYGTG + G    D V +  L+  +Q F  +T EP   F+  KFDGILGLG+
Sbjct:   68 LLNTLDMEYYGTISIGTPPQDFTVVFDTGSSNLWVPSVSCT-SPACQSHQMFNPSQSSTYKSTGQNLSIHYGTGDMEGTVGCDTVTVASLMDTNQLFGLSTSEPGQFFVYVKFDGILGLGY 187          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: CHYM_BOVIN (Chymosin OS=Bos taurus GN=CYM PE=1 SV=3)

HSP 1 Score: 125.176 bits (313), Expect = 3.300e-28
Identity = 62/140 (44.29%), Postives = 87/140 (62.14%), Query Frame = 2
Query:  242 RKYSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            ++Y +       G+   V L NY+D+QYFG+I +GTPPQ FTV+FDTGSS+ WVPS  C  S AC  H ++   +SST++  GK   IHYGTG++ G    D V + ++V   Q    +T+EP   F  A+FDGILG+ +
Sbjct:   47 QQYGISSKYSGFGEVASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIHYGTGSMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDVFTYAEFDGILGMAY 185          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: PEPA_CANFA (Pepsin A OS=Canis familiaris GN=PGA PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.628e-28
Identity = 63/122 (51.64%), Postives = 79/122 (64.75%), Query Frame = 2
Query:  296 ALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            +LKNYMD +YFG IGIGTPPQ FTVIFDTGSSNLWVPS  C  S AC  H+++    SSTY+   +   I YGTG+++G    D V++G +   +Q F  +  EP      A FDGILGL +
Sbjct:   65 SLKNYMDMEYFGTIGIGTPPQEFTVIFDTGSSNLWVPSVYC-SSPACSNHNRFNPQESSTYQGTNRPVSIAYGTGSMTGILGYDTVQVGGIADTNQIFGLSETEPGSFLYYAPFDGILGLAY 185          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: PEPA3_RABIT (Pepsin-3 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.254e-27
Identity = 62/121 (51.24%), Postives = 81/121 (66.94%), Query Frame = 2
Query:  299 LKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            L+NY+D +YFG IGIGTP Q+FTVIFDTGSSNLWVPS  C  S AC  H+++    SST++   +S  I YGTG+++GF   D VK+G++   +Q F  +  EP      A FDGILGL +
Sbjct:   67 LENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYC-SSAACSVHNQFNPEDSSTFQATSESLSITYGTGSMTGFLGYDTVKVGNIEDTNQIFGLSESEPGSFLYYAPFDGILGLAY 186          
BLAST of FC920186 vs. ExPASy Swiss-Prot
Match: PEPC_RABIT (Gastricsin OS=Oryctolagus cuniculus GN=PGC PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.793e-27
Identity = 59/119 (49.58%), Postives = 81/119 (68.07%), Query Frame = 2
Query:  305 NYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGF 661
            +Y+DA YFGEI IGTP QNF V+FDTGSSNLWVPS  C  S AC  H+++   +SST+    ++  + YG+G+++GFF  D   I ++ V +QEF  +  EP   FL A+FDGI+GL +
Sbjct:   67 DYLDAAYFGEISIGTPSQNFLVLFDTGSSNLWVPSVYCQ-SEACTTHNRFNPSKSSTFYTYDQTFSLEYGSGSLTGFFGYDTFTIQNIEVPNQEFGLSETEPGTNFLYAEFDGIMGLAY 184          
The following BLAST results are available for this feature:
BLAST of FC920186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
PEPC_RHIFE7.853e-3050.85Gastricsin OS=Rhinolophus ferrumequinum GN=PGC PE=... [more]
PEPC_CAVPO7.853e-3048.23Gastricsin OS=Cavia porcellus GN=PGC PE=2 SV=1[more]
PEPC_SORUN1.750e-2950.85Gastricsin OS=Sorex unguiculatus GN=PGC PE=2 SV=1[more]
PEPC_RAT2.285e-2951.69Gastricsin OS=Rattus norvegicus GN=Pgc PE=1 SV=1[more]
PEPA4_MACFU2.285e-2943.98Pepsin A-4 OS=Macaca fuscata fuscata GN=PGA PE=1 S... [more]
PEPE_CHICK1.481e-2852.07Embryonic pepsinogen OS=Gallus gallus PE=2 SV=1[more]
CHYM_BOVIN3.300e-2844.29Chymosin OS=Bos taurus GN=CYM PE=1 SV=3[more]
PEPA_CANFA5.628e-2851.64Pepsin A OS=Canis familiaris GN=PGA PE=2 SV=1[more]
PEPA3_RABIT1.254e-2751.24Pepsin-3 OS=Oryctolagus cuniculus PE=2 SV=1[more]
PEPC_RABIT2.793e-2749.58Gastricsin OS=Oryctolagus cuniculus GN=PGC PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionC32005B02EF RVDevelop1 Citrus clementina cDNA clone C32005B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920186 ID=FC920186; Name=FC920186; organism=Citrus clementina; type=EST; length=690bp
GTCTGCTCCAAGCATTTCTCTGTCTCGATCATCGAAAGAGACTTTACTTG
TCAACATGGGAACGGTATTCAAATCTATTACAGCCGGTTTCTTCCTTTGT
TTGCTTCTGTTTCCTGTGGTGTTCTCGACACCAAACGGTGGGTTATACAG
AATCGGACTTAAAAAGAGGAAGTTTGACCTGAACAACAGAGTGGCTGCCC
GCCTTGACTCCAAGGAAGGAGAGTCATTCAGAACTTCTATCAGAAAATAT
TCTCTTCGTGGAAACTTAGGAGAGTCAGGGGATGCTGATATTGTTGCGCT
GAAGAACTACATGGATGCTCAGTACTTTGGTGAGATTGGTATTGGCACAC
CCCCGCAAAATTTCACTGTGATATTTGACACTGGTAGTTCAAATTTGTGG
GTGCCCTCTTCTAAGTGTTATTTCTCGATTGCATGCTATTTCCATTCCAA
GTACAGGTCAGGCCGCTCAAGTACCTACAAGAAGAATGGTAAATCGGCTG
ATATCCATTATGGAACTGGAGCTATTTCTGGTTTTTTTAGCGAAGACCAT
GTCAAAATCGGTGATCTTGTGGTCAAAGATCAGGAATTTATTGAGGCAAC
TAGGGAGCCCAGCCTCACTTTCTTGCTGGCCAAGTTTGATGGCATACTTG
GACTTGGCTTCCAGAGATTTCTGTTTGAAAGCTGTGCCCG
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