FC920194
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920194 vs. ExPASy Swiss-Prot
Match: 2NPD_STAA2 (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain JH1) GN=SaurJH1_0937 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.188e-16 Identity = 49/127 (38.58%), Postives = 76/127 (59.84%), Query Frame = 2 Query: 269 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGT 622 +I I+ ++V V ++G +E ++ A +K++ S DEA AG+DAI+ QG EAGGH + G ISL+P +VD++ IP+IAAGGI+D RG +A++ LGA+G+ +GT Sbjct: 117 HIDTIIKKQVPVCCFTFGIPNESIIERLKEANIKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVV---SIPVIAAGGIMDGRGVLASIVLGAEGVQMGT 240
BLAST of FC920194 vs. ExPASy Swiss-Prot
Match: 2NPD_STAAW (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain MW2) GN=MW0803 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.552e-16 Identity = 49/127 (38.58%), Postives = 75/127 (59.06%), Query Frame = 2 Query: 269 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGT 622 +I + ++V V ++G SE ++ A +K++ S DEA AG+DAI+ QG EAGGH + G ISL+P +VD++ IP+IAAGGI+D RG +A++ LGA+G+ +GT Sbjct: 117 HIDTTIKKQVPVCCFTFGIPSESIIKRLKEANIKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVV---SIPVIAAGGIMDGRGVLASIVLGAEGVQMGT 240
BLAST of FC920194 vs. ExPASy Swiss-Prot
Match: 2NPD_BACSU (Probable 2-nitropropane dioxygenase OS=Bacillus subtilis GN=yrpB PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.520e-14 Identity = 64/226 (28.32%), Postives = 98/226 (43.36%), Query Frame = 2 Query: 71 IVQAPLGPDISGPEXXXXXXXXXXXXXXRAPDWEAPDYLRDLIRKTRSLTERPFGVGVV----LAFPHNENIK------------------------------AILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH------VIGQD--GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGT 622 I+QAP+ I+ P A + PD L I++ LT+ PF + V L P + IK IL KV ++ E+ V E +AG ++ + +EA G+D +++QG EAGGH G+ GL++L+P D + +P+IAAGG++D RG AAL+LGAQG+ +G+ Sbjct: 14 IIQAPMAGGITKPRLASAVSNQGALGSL-ASGYLTPDLLEQQIKEIFELTDAPFQINVFVPLGLEMPPKDQIKKWKENIPLANQVNQFTSVQEEWDDFYQKIDLILKYKVKACSFTFDLPPEDAVKELKTAGCCLIGTASTVEEALLMEERGMDIVVLQGSEAGGHRGAFLPSKGESAVGLMALIPQAADAL---SVPVIAAGGMIDHRGVKAALTLGAQGVQIGS 235
BLAST of FC920194 vs. ExPASy Swiss-Prot
Match: 2NPD_STAHJ (Probable 2-nitropropane dioxygenase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH2032 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.098e-13 Identity = 44/127 (34.65%), Postives = 74/127 (58.27%), Query Frame = 2 Query: 272 IKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH------VIGQD----GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGT 622 I+ ++ +V V ++G S+E++ + A + ++ + DEA +AG+D ++ QG EAGGH Q G +SL+P +VD + IP++AAGG++D RG +A+ LGAQG+ +GT Sbjct: 118 IQTVIKYRVPVCCFTFGIPSKEIIEQLKGAKITLIGTATTVDEAIANEHAGMDIVVAQGSEAGGHRGSFLTTNNQREPLIGTMSLIPQIVDHVS---IPVVAAGGVMDGRGILASQILGAQGVQMGT 241
BLAST of FC920194 vs. ExPASy Swiss-Prot
Match: 2NPD_STAS1 (Probable 2-nitropropane dioxygenase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1854 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.103e-13 Identity = 43/127 (33.86%), Postives = 73/127 (57.48%), Query Frame = 2 Query: 272 IKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH----------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGT 622 I ++ + V + ++G + ++ + +K++ S +EA +AG+D +I QG EAGGH + G +SL+P +VD I +IP++AAGGI+D RG VA++ LGA+G+ +GT Sbjct: 118 IDLVIEKGVPAVSFTFGIPEQTVIEKLKERHIKLIGTATSVEEAIANESAGMDMVIAQGSEAGGHRGAFSETASQLTPLIGTMSLVPQMVDQI---NIPVVAAGGIMDGRGLVASMVLGAEGVQMGT 241 The following BLAST results are available for this feature:
BLAST of FC920194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920194 ID=FC920194; Name=FC920194; organism=Citrus clementina; type=EST; length=660bpback to top |