FC920412
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920412 vs. ExPASy Swiss-Prot
Match: DNAJ_BURM7 (Chaperone protein dnaJ OS=Burkholderia mallei (strain NCTC 10247) GN=dnaJ PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.348e-14 Identity = 46/102 (45.10%), Postives = 62/102 (60.78%), Query Frame = 3 Query: 192 EYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTE---AIIDPAAIFAMLFGSELFEDYIGQLA 488 +YY+VLGV+ AS+ EIKKAY A K HPD+NP+ A ++F+ EAY++LSD +R AYD YG +G+ A FA FG ++F D GQ A Sbjct: 5 DYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGVDPNVGAAGAQGFGGFADAFG-DIFGDIFGQAA 105
BLAST of FC920412 vs. ExPASy Swiss-Prot
Match: DNAJ_BURCJ (Chaperone protein dnaJ OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=dnaJ PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.348e-14 Identity = 46/102 (45.10%), Postives = 62/102 (60.78%), Query Frame = 3 Query: 192 EYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTE---AIIDPAAIFAMLFGSELFEDYIGQLA 488 +YY+VLGV+ AS+ EIKKAY A K HPD+NP+ A ++F+ EAY++LSD +R AYD YG +G+ A FA FG ++F D GQ A Sbjct: 5 DYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGVDPNMGGAGAQGFGGFADAFG-DIFGDIFGQAA 105
BLAST of FC920412 vs. ExPASy Swiss-Prot
Match: DNAJ_BURCH (Chaperone protein dnaJ OS=Burkholderia cenocepacia (strain HI2424) GN=dnaJ PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.348e-14 Identity = 46/102 (45.10%), Postives = 62/102 (60.78%), Query Frame = 3 Query: 192 EYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTE---AIIDPAAIFAMLFGSELFEDYIGQLA 488 +YY+VLGV+ AS+ EIKKAY A K HPD+NP+ A ++F+ EAY++LSD +R AYD YG +G+ A FA FG ++F D GQ A Sbjct: 5 DYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGVDPNMGGAGAQGFGGFADAFG-DIFGDIFGQAA 105
BLAST of FC920412 vs. ExPASy Swiss-Prot
Match: DNAJ_BURCC (Chaperone protein dnaJ OS=Burkholderia cenocepacia (strain MC0-3) GN=dnaJ PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.348e-14 Identity = 46/102 (45.10%), Postives = 62/102 (60.78%), Query Frame = 3 Query: 192 EYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTE---AIIDPAAIFAMLFGSELFEDYIGQLA 488 +YY+VLGV+ AS+ EIKKAY A K HPD+NP+ A ++F+ EAY++LSD +R AYD YG +G+ A FA FG ++F D GQ A Sbjct: 5 DYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGVDPNMGGAGAQGFGGFADAFG-DIFGDIFGQAA 105
BLAST of FC920412 vs. ExPASy Swiss-Prot
Match: DNAJ_BURCA (Chaperone protein dnaJ OS=Burkholderia cenocepacia (strain AU 1054) GN=dnaJ PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.348e-14 Identity = 46/102 (45.10%), Postives = 62/102 (60.78%), Query Frame = 3 Query: 192 EYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTE---AIIDPAAIFAMLFGSELFEDYIGQLA 488 +YY+VLGV+ AS+ EIKKAY A K HPD+NP+ A ++F+ EAY++LSD +R AYD YG +G+ A FA FG ++F D GQ A Sbjct: 5 DYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGVDPNMGGAGAQGFGGFADAFG-DIFGDIFGQAA 105
BLAST of FC920412 vs. ExPASy Swiss-Prot
Match: DNAJ_BACTN (Chaperone protein dnaJ OS=Bacteroides thetaiotaomicron GN=dnaJ PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.348e-14 Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 177 MVKETEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEA 413 M ++ +YY+VL V+ TA+ EIKKAY KA + HPDKNP D A + F+ EAY VLS+P +R YD +G +G+S A Sbjct: 1 MAEKRDYYEVLEVTKTATVEEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSNPDKRSRYDQFGHAGVSGAA 79
BLAST of FC920412 vs. ExPASy Swiss-Prot
Match: DNJB4_MOUSE (DnaJ homolog subfamily B member 4 OS=Mus musculus GN=Dnajb4 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.761e-14 Identity = 48/132 (36.36%), Postives = 72/132 (54.55%), Query Frame = 3 Query: 192 EYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEA--------------IIDPAAIFAMLF-GSELFEDYIGQLAMASVASLDIFTEGEEFDA 542 +YY +LG+ A++ ++KKAY +A K HPDKN + P A + F+ + EAY+VLSDP +R+ YD +G+ G+ A DP A FA F GS FE + G+ S ++ +G+ F A Sbjct: 4 DYYHILGIDKGATDEDVKKAYRKQALKFHPDKNKS-PQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGGTDGQGGTFRYTFHGDPHATFAAFFGGSNPFEIFFGRRMGGGRDSEEMEIDGDPFSA 134
BLAST of FC920412 vs. ExPASy Swiss-Prot
Match: DNAJ_RHILE (Chaperone protein dnaJ (Fragment) OS=Rhizobium leguminosarum GN=dnaJ PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.761e-14 Identity = 39/100 (39.00%), Postives = 60/100 (60.00%), Query Frame = 3 Query: 186 ETEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPAAIFAMLFGSELFEDYIGQL 485 + ++Y+ LGV+ +A E E+K A+ A K HPDKNP+D A + F+ + EAY++L DP +R AYD YG + + FA S++FED G++ Sbjct: 3 KADFYETLGVAKSADEKELKSAFRKLAMKFHPDKNPDDKDAERKFKEINEAYEMLKDPQKRAAYDRYGHAAFEHGGMGGGGGGFAGGGFSDIFEDIFGEM 102
BLAST of FC920412 vs. ExPASy Swiss-Prot
Match: DNAJ_RHIL3 (Chaperone protein dnaJ OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=dnaJ PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.761e-14 Identity = 39/100 (39.00%), Postives = 60/100 (60.00%), Query Frame = 3 Query: 186 ETEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPAAIFAMLFGSELFEDYIGQL 485 + ++Y+ LGV+ +A E E+K A+ A K HPDKNP+D A + F+ + EAY++L DP +R AYD YG + + FA S++FED G++ Sbjct: 3 KADFYETLGVAKSADEKELKSAFRKLAMKYHPDKNPDDKDAERKFKEINEAYEMLKDPQKRAAYDRYGHAAFEHGGMGGGGGGFAGGGFSDIFEDIFGEM 102
BLAST of FC920412 vs. ExPASy Swiss-Prot
Match: DNAJ_RHIE6 (Chaperone protein dnaJ OS=Rhizobium etli (strain CIAT 652) GN=dnaJ PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.761e-14 Identity = 39/100 (39.00%), Postives = 60/100 (60.00%), Query Frame = 3 Query: 186 ETEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPAAIFAMLFGSELFEDYIGQL 485 + ++Y+ LGV+ +A E E+K A+ A K HPDKNP+D A + F+ + EAY++L DP +R AYD YG + + FA S++FED G++ Sbjct: 3 KADFYETLGVAKSADEKELKSAFRKLAMKYHPDKNPDDKDAERKFKEINEAYEMLKDPQKRAAYDRYGHAAFEHGGMGGGGGGFAGGGFSDIFEDIFGEM 102 The following BLAST results are available for this feature:
BLAST of FC920412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920412 ID=FC920412; Name=FC920412; organism=Citrus clementina; type=EST; length=731bpback to top |