FC920417
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920417 vs. ExPASy Swiss-Prot
Match: ROA2_MOUSE (Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus GN=Hnrnpa2b1 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 34/90 (37.78%), Postives = 56/90 (62.22%), Query Frame = 3 Query: 414 KKLVVLGIPWDVDTDGLREYMSKFGDLEDCVVMKERSTGRSRGFGYVTFASAEDAKTALSAE-HFLGSRMLEVKIATPKEEMRAPPRKVS 680 +KL + G+ ++ + LR Y ++G L DCVVM++ ++ RSRGFG+VTF+S + A++A H + R++E K A +EE P V+ Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVT 110
BLAST of FC920417 vs. ExPASy Swiss-Prot
Match: ROA2_HUMAN (Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Homo sapiens GN=HNRNPA2B1 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 34/90 (37.78%), Postives = 56/90 (62.22%), Query Frame = 3 Query: 414 KKLVVLGIPWDVDTDGLREYMSKFGDLEDCVVMKERSTGRSRGFGYVTFASAEDAKTALSAE-HFLGSRMLEVKIATPKEEMRAPPRKVS 680 +KL + G+ ++ + LR Y ++G L DCVVM++ ++ RSRGFG+VTF+S + A++A H + R++E K A +EE P V+ Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVT 110
BLAST of FC920417 vs. ExPASy Swiss-Prot
Match: ROA2_BOVIN (Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Bos taurus GN=HNRNPA2B1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 34/90 (37.78%), Postives = 56/90 (62.22%), Query Frame = 3 Query: 414 KKLVVLGIPWDVDTDGLREYMSKFGDLEDCVVMKERSTGRSRGFGYVTFASAEDAKTALSAE-HFLGSRMLEVKIATPKEEMRAPPRKVS 680 +KL + G+ ++ + LR Y ++G L DCVVM++ ++ RSRGFG+VTF+S + A++A H + R++E K A +EE P V+ Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVT 98
BLAST of FC920417 vs. ExPASy Swiss-Prot
Match: RB27C_DROME (Heterogeneous nuclear ribonucleoprotein 27C OS=Drosophila melanogaster GN=Hrb27C PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 33/78 (42.31%), Postives = 45/78 (57.69%), Query Frame = 3 Query: 417 KLVVLGIPWDVDTDGLREYMSKFGDLEDCVVMKERSTGRSRGFGYVTFASAEDAKTAL-SAEHFLGSRMLEVKIATPK 647 KL V G+ W+ + L Y +FGD+ DCVVMK +GRSRGFG+VTFA + L + H L R ++ K P+ Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPR 85
BLAST of FC920417 vs. ExPASy Swiss-Prot
Match: ROA2_SAGOE (Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Saguinus oedipus GN=HNRNPA2B1 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 34/90 (37.78%), Postives = 55/90 (61.11%), Query Frame = 3 Query: 414 KKLVVLGIPWDVDTDGLREYMSKFGDLEDCVVMKERSTGRSRGFGYVTFASAEDAKTALSAE-HFLGSRMLEVKIATPKEEMRAPPRKVS 680 +KL + G+ + + LR Y ++G L DCVVM++ ++ RSRGFG+VTF+S + A++A H + R++E K A +EE P V+ Sbjct: 9 RKLFIGGLSFQTTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVT 98
BLAST of FC920417 vs. ExPASy Swiss-Prot
Match: ROA1_MACMU (Heterogeneous nuclear ribonucleoprotein A1 OS=Macaca mulatta GN=HNRNPA1 PE=2 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 32/85 (37.65%), Postives = 55/85 (64.71%), Query Frame = 3 Query: 414 KKLVVLGIPWDVDTDGLREYMSKFGDLEDCVVMKERSTGRSRGFGYVTFASAEDAKTALSAE-HFLGSRMLEVKIATPKEEMRAP 665 +KL + G+ ++ + LR + ++G L DCVVM++ +T RSRGFG+VT+A+ E A++A H + R++E K A +E+ + P Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKVDAAMNARPHKVDGRVVEPKRAVSREDSQRP 98 The following BLAST results are available for this feature:
BLAST of FC920417 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920417 ID=FC920417; Name=FC920417; organism=Citrus clementina; type=EST; length=680bpback to top |