FC920418

Overview
NameFC920418
Unique NameFC920418
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length673
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15452 contig Ccv1_Contig15452:3..675. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CAT3_NEUCR (Catalase-3 OS=Neurospora crassa GN=cat-3 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.194e-43
Identity = 94/187 (50.27%), Postives = 117/187 (62.57%), Query Frame = 2
Query:  125 NAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQE----YWRILDFCSHLPESLSTFSWFFDDVGI 673
            N  FMTT+ G  +  +  SL  G RG  LLED+   +KL HF  ERIPERVVHARGA A G F    D S++T A    A   QTPV VRFSTV   RGS +T RD  GFA +FYT EGN+D++GN+IPVFFI+DAI+FPD+IH+ KP+P + + +    +    DF S  P +L T  W     GI
Sbjct:   51 NGQFMTTDFGGNI-EEQFSLKAGGRGSTLLEDFIFRQKLQHFDHERIPERVVHARGAGAHGIFTSYGDWSNITAASFLGAKDKQTPVFVRFSTVAGSRGSADTARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAIRFPDLIHSVKPSPDNEVPQAATAHDSAWDFFSSQPSALHTLFWAMSGNGI 236          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA_BACFR (Catalase OS=Bacteroides fragilis GN=katA PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.560e-43
Identity = 87/167 (52.10%), Postives = 117/167 (70.06%), Query Frame = 2
Query:  137 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 637
            +T   G P+ ++ +S T G RGP++L+D  L+EKLAHF RE IPER +HA+G+ A G F  THDI+  T A +F   G QT   VRFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF+RD +KFPD+ HA K +P+++++      DF + LPE+L
Sbjct:    6 LTAANGRPIADNQNSQTAGPRGPIMLQDPWLIEKLAHFDREVIPERRMHAKGSGAYGTFTVTHDITKYTRAAIFSQVGKQTECFVRFSTVAGERGAADAERDIRGFAMKFYTEEGNWDLVGNNTPVFFLRDPLKFPDLNHAVKRDPRNNMRSANNNWDFWTLLPEAL 172          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATB_ASPOR (Catalase B OS=Aspergillus oryzae GN=catB PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.927e-43
Identity = 92/187 (49.20%), Postives = 115/187 (61.50%), Query Frame = 2
Query:  125 NAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQE----YWRILDFCSHLPESLSTFSWFFDDVGI 673
            N  F+T++ G P+  D +SL VG RGP LLED+   +K+  F  ER+PER VHARG  A G F    D S++T A    A G +TPV VRFSTV   RGS +  RD  GFA +FYT EGN+D++GN+IPVFFI+DAI FPD+IHA KP   + I +    +    DF S  P SL T  W     GI
Sbjct:   50 NDTFLTSDVGGPI-EDQNSLQVGDRGPTLLEDFIFRQKIQRFDHERVPERAVHARGVGAHGVFTSYGDYSNITAASFLGAEGKETPVFVRFSTVAGSRGSSDLARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAILFPDLIHAVKPRGDNEIPQAATAHDSAWDFFSQQPSSLHTLLWAMSGHGI 235          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATB_ASPFU (Catalase B OS=Aspergillus fumigatus GN=catB PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.927e-43
Identity = 91/187 (48.66%), Postives = 115/187 (61.50%), Query Frame = 2
Query:  125 NAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQE----YWRILDFCSHLPESLSTFSWFFDDVGI 673
            N  FMT++ G P+  D +SL+ G RGP LLED+   +K+  F  ER+PER VHARGA A G F    D S++T A      G QTPV VRFSTV   RGS +  RD  GFA +FYT EGN+D++GN+IPVFFI+DAI FPD+IHA KP   + I +    +    DF S  P ++ T  W     GI
Sbjct:   51 NDAFMTSDVGGPI-EDQNSLSAGERGPTLLEDFIFRQKIQRFDHERVPERAVHARGAGAHGVFTSYGDFSNITAASFLAKEGKQTPVFVRFSTVAGSRGSSDLARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAILFPDLIHAVKPRGDNEIPQAATAHDSAWDFFSQQPSTMHTLLWAMSGHGI 236          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA_CAMJE (Catalase OS=Campylobacter jejuni GN=katA PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 7.741e-43
Identity = 89/179 (49.72%), Postives = 122/179 (68.16%), Query Frame = 2
Query:  137 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGI 673
            +T + G  + ++ +SL+ G++GP+L++DY L+EKLAH  RERIPER VHA+G+ A G  + T D+S  T A +F+  G  TP+ +RFSTV  E G+ +  RD RGFA+KFYT+EGNWDL+GN+ P FFIRDA KFPD IH  K +P++H++      DF S  PESL   +    D GI
Sbjct:    4 LTNDFGNIIADNQNSLSAGTKGPLLMQDYLLLEKLAHQNRERIPERTVHAKGSGAYGEIKITADLSAYTKAKIFQK-GEITPLFLRFSTVAGEAGAADAERDVRGFAIKFYTKEGNWDLVGNNTPTFFIRDAYKFPDFIHTQKRDPRTHLRSNNAAWDFWSLCPESLHQVTILMRDRGI 181          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA_STAXY (Catalase A OS=Staphylococcus xylosus GN=katA PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.724e-42
Identity = 86/174 (49.43%), Postives = 117/174 (67.24%), Query Frame = 2
Query:  152 GAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGI 673
            GAPV +  +S+T G RGP+L++D + +E++AHF RE IPER +HA+G+ A G F  T+DI+  TCA +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF RD   FP + H  K NPK+++++     DF + LPE+L   +    D GI
Sbjct:   10 GAPVSDRENSMTAGPRGPLLMQDIYFLEQMAHFDREVIPERRMHAKGSGAFGTFTVTNDITKYTCASIFAEVGKQTEMFARFSTVAGERGAGDAERDIRGFALKFYTDEGNWDLVGNNTPVFFFRDPKLFPSLNHVVKRNPKTNMKDPQANWDFWTLLPEALHQITILMTDRGI 183          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATB_EMENI (Catalase B OS=Emericella nidulans GN=catB PE=2 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.460e-41
Identity = 89/184 (48.37%), Postives = 113/184 (61.41%), Query Frame = 2
Query:  134 FMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQE----YWRILDFCSHLPESLSTFSWFFDDVGI 673
            ++TT+ G P+  D  SL  G+RG  LLED+   +K+  F  ER+PER VHARGA A G F    D S++T A    A G +TPV VRFSTV   RGS +  RD  GFA +FYT EGN+D++GN+IPVFFI+DAI+FPD+IHA KP     I +    +    DF S  P +L T  W     GI
Sbjct:   52 YLTTDVGGPI-EDQQSLKAGARGSTLLEDFIFRQKIQRFDHERVPERAVHARGAGAHGVFTSYGDFSNITAASFLSAEGKETPVFVRFSTVAGSRGSSDLARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAIQFPDLIHAVKPKGDREIPQAATAHDAAWDFFSQQPSTLHTLLWAMAGHGI 234          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA_HAEIN (Catalase OS=Haemophilus influenzae GN=katA PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.460e-41
Identity = 88/179 (49.16%), Postives = 118/179 (65.92%), Query Frame = 2
Query:  137 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGI 673
            +T   GAPV ++ +SLT G RGP+L +D  L EKLA F RE IPER +HA+G+ A G F  THDI+  T A +F   G +T +  RF+TV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF+RD  KFPD+  A K +P+++++      DF + LPE+L   +    D GI
Sbjct:   15 LTMGNGAPVADNQNSLTAGPRGPLLAQDLWLNEKLADFVREVIPERRMHAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFTTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNMRSATNNWDFWTLLPEALHQVTVVMSDRGI 193          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA_CANTR (Peroxisomal catalase OS=Candida tropicalis GN=POX9 PE=1 SV=4)

HSP 1 Score: 168.318 bits (425), Expect = 3.252e-41
Identity = 87/181 (48.07%), Postives = 113/181 (62.43%), Query Frame = 2
Query:  128 APFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVG 670
            AP  T + G P+     +  VG  GP+LL+D++L++ LAHF RERIPERVVHA+G+ A G FE T DI+ +  A      G +T +  RFSTV  E GS +T RDPRGFA KFYT EGN DL+ N+ PVFFIRD  KFP  IH  K NP++H+++     D+ +   ES+      F D G
Sbjct:    2 APTFTNSNGQPIPEPFATQRVGQHGPLLLQDFNLIDSLAHFDRERIPERVVHAKGSGAYGVFEVTDDITDVCAAKFLDTVGKKTRIFTRFSTVGGELGSADTARDPRGFATKFYTEEGNLDLVYNNTPVFFIRDPSKFPHFIHTQKRNPETHLKDANMFWDYLTTNEESVHQVMVLFSDRG 182          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA_STAS1 (Catalase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=katA PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.248e-41
Identity = 84/179 (46.93%), Postives = 119/179 (66.48%), Query Frame = 2
Query:  137 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGI 673
            +T+  GAPV +  +S+T G RGP+L++D++ +E++AHF RE IPER +HA+G+ A G F  T+DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF RD   F  + HA K +P+++++      DF + LPE+L   +    D GI
Sbjct:    7 LTSLFGAPVSDRENSMTAGPRGPLLMQDWYFLEQMAHFDREVIPERRMHAKGSGAFGTFTVTNDITQYTSASIFSEVGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTDEGNWDLVGNNTPVFFFRDPKLFASLNHAIKRDPRTNMRSAQNNWDFWTSLPEALHQVTILMTDRGI 185          
The following BLAST results are available for this feature:
BLAST of FC920418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CAT3_NEUCR1.194e-4350.27Catalase-3 OS=Neurospora crassa GN=cat-3 PE=1 SV=1[more]
CATA_BACFR1.560e-4352.10Catalase OS=Bacteroides fragilis GN=katA PE=1 SV=1[more]
CATB_ASPOR5.927e-4349.20Catalase B OS=Aspergillus oryzae GN=catB PE=2 SV=1[more]
CATB_ASPFU5.927e-4348.66Catalase B OS=Aspergillus fumigatus GN=catB PE=1 S... [more]
CATA_CAMJE7.741e-4349.72Catalase OS=Campylobacter jejuni GN=katA PE=1 SV=1[more]
CATA_STAXY1.724e-4249.43Catalase A OS=Staphylococcus xylosus GN=katA PE=3 ... [more]
CATB_EMENI1.460e-4148.37Catalase B OS=Emericella nidulans GN=catB PE=2 SV=... [more]
CATA_HAEIN1.460e-4149.16Catalase OS=Haemophilus influenzae GN=katA PE=2 SV... [more]
CATA_CANTR3.252e-4148.07Peroxisomal catalase OS=Candida tropicalis GN=POX9... [more]
CATA_STAS14.248e-4146.93Catalase OS=Staphylococcus saprophyticus subsp. sa... [more]

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Properties
Property NameValue
Genbank descriptionC32008B05EF RVDevelop1 Citrus clementina cDNA clone C32008B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920418 ID=FC920418; Name=FC920418; organism=Citrus clementina; type=EST; length=673bp
ACACTCTTCTTGAGTCTCGACTCAACTCCACTTCTCCTTTCTTACGATAA
TAATAACAGTAGCAAAATCTTCAGCAAGAAATATCGCCATGGATCCCTAC
AAATTGCTTCCGTCAACTACTCACAATGCCCCCTTTATGACTACAAATGC
CGGCGCTCCTGTCTGGAACGACAATCACTCCTTGACTGTTGGAAGTAGAG
GTCCTGTCCTTCTTGAGGATTATCATCTGGTGGAGAAACTAGCTCATTTT
GCCAGGGAGAGGATTCCAGAACGCGTCGTCCATGCTAGGGGAGCCAGTGC
TAAGGGTTTCTTTGAGTGCACCCATGATATTTCTCACCTTACTTGTGCTG
ATCTTTTTCGAGCTCCAGGGGTTCAGACACCTGTCATTGTTCGCTTCTCC
ACTGTTATCCATGAGCGGGGCAGCCCTGAGACACTCAGGGATCCTCGAGG
ATTTGCAGTCAAGTTTTACACCAGAGAGGGTAATTGGGATCTTCTGGGTA
ACAGTATCCCTGTTTTTTTCATCCGTGATGCAATCAAATTCCCAGATGTG
ATCCATGCTTTTAAACCTAATCCAAAGTCTCACATCCAAGAGTACTGGAG
GATCCTCGACTTCTGCTCCCACCTTCCTGAAAGCTTGTCCACATTTTCCT
GGTTCTTTGATGATGTGGGTATT
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