FC920418

Overview
NameFC920418
Unique NameFC920418
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length673
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15452 contig Ccv1_Contig15452:3..675. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA2_CUCPE (Catalase isozyme 2 OS=Cucurbita pepo GN=CAT2 PE=2 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 1.592e-88
Identity = 148/195 (75.90%), Postives = 172/195 (88.21%), Query Frame = 2
Query:   89 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGI 673
            MDPYK  PS+ +N PF TTN+GAP+WN+   ++VG RGP+LLEDY L+EK+A F RERIPERVVHARGASAKGFFE THD+S L+CAD  RAPGVQTPVIVRFSTVIHER SPET+RDPRGFAVKFYTREGN+DL+GN+ PVFF+RDA++FPDVI AFKPNPKSH+QE WR LDFCS+ PESL +F+WF+DDVGI
Sbjct:    1 MDPYKYRPSSAYNTPFCTTNSGAPIWNNTAVMSVGERGPILLEDYQLIEKIATFTRERIPERVVHARGASAKGFFEVTHDVSDLSCADFLRAPGVQTPVIVRFSTVIHERVSPETVRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDAMQFPDVIRAFKPNPKSHLQESWRFLDFCSYHPESLLSFAWFYDDVGI 195          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA2_NICPL (Catalase isozyme 2 OS=Nicotiana plumbaginifolia GN=CAT2 PE=2 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 2.079e-88
Identity = 155/193 (80.31%), Postives = 170/193 (88.08%), Query Frame = 2
Query:   89 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDV 667
            MDP K  PS+ +++PF+TTNAG PV+N+  SLTVG RGPVLLEDYHL+EKLA F RERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVIVRFSTV+HERGSPE+LRD RGFAVKFYTREGN+DL+GN++PVFF RDA  FPD I A KPNPKSHIQEYWRILDF S LPESL TF+WFFDDV
Sbjct:    1 MDPSKFRPSSAYDSPFLTTNAGGPVYNNVSSLTVGPRGPVLLEDYHLIEKLATFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVVHERGSPESLRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQEYWRILDFFSFLPESLHTFAWFFDDV 193          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA1_HORVU (Catalase isozyme 1 OS=Hordeum vulgare GN=CAT1 PE=2 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 7.900e-88
Identity = 148/195 (75.90%), Postives = 175/195 (89.74%), Query Frame = 2
Query:   89 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGI 673
            MDPYK  P++  N+ + TTN+GAPVWN+N++LTVG RGP+LLEDYHL+EKLA F RERIPERVVHARGASAKGFFE THD+S LTCAD  RAPGVQTPVIVRFSTV+HERGSPETLRDPRGFAVKFYTREGN+DL+GN++PVFFIRD +KFPD++HAFKP+PK+++QE WR++DF SH PESL  F++ FDDVGI
Sbjct:    1 MDPYKHRPTSGANSAYWTTNSGAPVWNNNNALTVGHRGPILLEDYHLIEKLAQFDRERIPERVVHARGASAKGFFEVTHDVSQLTCADFLRAPGVQTPVIVRFSTVVHERGSPETLRDPRGFAVKFYTREGNFDLVGNNMPVFFIRDGMKFPDMVHAFKPSPKTNMQENWRVVDFFSHHPESLHMFTFLFDDVGI 195          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA2_WHEAT (Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 6.688e-87
Identity = 147/195 (75.38%), Postives = 174/195 (89.23%), Query Frame = 2
Query:   89 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGI 673
            MDPYK  P++  N+ + TTN+GAPVWN+N++LTVG RGP+LLEDYHL+EKLA F RERIPERVVHARGASAKGFFE THD+S LTCAD  RAPGVQTPVIVRFSTV+HERGSPETLRDPRGFAVKFYTREGN+DL+GN++PVFFIRD +KFPD++HAFKP+ K+++QE WR++DF SH PESL  F++ FDDVGI
Sbjct:    1 MDPYKHRPTSGANSAYWTTNSGAPVWNNNNALTVGHRGPILLEDYHLIEKLAQFDRERIPERVVHARGASAKGFFEVTHDVSQLTCADFLRAPGVQTPVIVRFSTVVHERGSPETLRDPRGFAVKFYTREGNFDLVGNNMPVFFIRDGMKFPDMVHAFKPSSKTNMQENWRVVDFFSHHPESLHMFTFLFDDVGI 195          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA1_TOBAC (Catalase isozyme 1 OS=Nicotiana tabacum GN=CAT-1 PE=1 SV=2)

HSP 1 Score: 318.161 bits (814), Expect = 2.541e-86
Identity = 152/193 (78.76%), Postives = 168/193 (87.05%), Query Frame = 2
Query:   89 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDV 667
            MD  K  PS+ +++PF+TTNAG PV+N+  SLTVG RGPVLLEDYHL+EKLA F RERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVI RFSTV+HERGSPE+LRD RGFAVKFYTREGN+DL+GN++PVFF RDA  FPD I A KPNPKSHIQEYW+ILDF S LPESL TF+WFFDDV
Sbjct:    1 MDLSKFRPSSAYDSPFLTTNAGGPVYNNVSSLTVGPRGPVLLEDYHLIEKLATFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVICRFSTVVHERGSPESLRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQEYWKILDFFSFLPESLHTFAWFFDDV 193          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA_SECCE (Catalase OS=Secale cereale PE=2 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 4.793e-85
Identity = 147/195 (75.38%), Postives = 163/195 (83.59%), Query Frame = 2
Query:   89 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGI 673
            MDP K  PS++ +    TTN G PVWNDN +LTVG RGP+LLEDYHL+EK+AHFAR+ IPE  VHA  ASAKGFFECTHD++ LTCAD   +PG  TPVIVRFSTVIHERGSPET+RDPRGFAVKFYTREGNWDLLGN+ PVFFIRD IKFPDVIHAFKPNPKSH+QEYWR+ DF  H PESL TF + FDDVGI
Sbjct:    1 MDPCKFRPSSSFDTKTTTTNPGQPVWNDNEALTVGPRGPILLEDYHLLEKIAHFARD-IPEPFVHAGRASAKGFFECTHDVTGLTCADFLPSPGAGTPVIVRFSTVIHERGSPETIRDPRGFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPKSHVQEYWRVFDFLPHHPESLHTFFFLFDDVGI 194          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA_CAPAN (Catalase OS=Capsicum annuum GN=CAT PE=2 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 5.299e-84
Identity = 149/193 (77.20%), Postives = 167/193 (86.53%), Query Frame = 2
Query:   89 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDV 667
            MD  K  PS+ +++PF+TTNAG PV+N+  SLTVG RGPVLLEDYHL+EKLA F RERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVI RFSTV+HERGSPE++RD RGFAVKFYTREGN+DL+GN++PVFF RDA  FPD I A KPNPKSHIQE WRILDF S LPESL TF++F+DDV
Sbjct:    1 MDLSKYRPSSAYDSPFLTTNAGGPVYNNVSSLTVGPRGPVLLEDYHLIEKLATFVRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVICRFSTVVHERGSPESIRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQENWRILDFFSFLPESLHTFAFFYDDV 193          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA_SOLME (Catalase OS=Solanum melongena PE=2 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.542e-83
Identity = 148/193 (76.68%), Postives = 166/193 (86.01%), Query Frame = 2
Query:   89 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDV 667
            MD  K  PS+ ++ PF+TTNAG PV+N+  SLTVG RGPVLLEDYHL+EKLA F RERIPERVVHARGASAKGFFE THD+SHLTCAD  RAPGVQTPVI RFSTV+HERGSPE++RD RGFAVKFYTREGN+DL+GN++PVFF RDA  FPD I A KPNPKSHIQE WRILDF S LPESL TF++F+DDV
Sbjct:    1 MDLSKYRPSSAYDTPFLTTNAGGPVYNNVSSLTVGPRGPVLLEDYHLIEKLATFDRERIPERVVHARGASAKGFFEVTHDVSHLTCADFLRAPGVQTPVICRFSTVVHERGSPESIRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQENWRILDFFSFLPESLHTFAFFYDDV 193          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA2_SOLTU (Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE=3 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 2.630e-83
Identity = 147/193 (76.17%), Postives = 166/193 (86.01%), Query Frame = 2
Query:   89 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDV 667
            MDP K  PS+ ++ PF+TTNAG PV+N+  SLTVG RGPVLLEDY+L+EKLA F RE+IPERVVHARGASAKGFFE THDISHLTCAD  RAPG QTPVI RFSTV+HERGSPE++RD RGFAVKFYTREGN+DL+GN++PVFF RDA  FPD I A KPNPKSHIQE WRILDF S LPESL TF++F+DDV
Sbjct:    1 MDPSKYRPSSAYDTPFLTTNAGGPVYNNVSSLTVGPRGPVLLEDYYLIEKLATFDREKIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGAQTPVICRFSTVVHERGSPESIRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQENWRILDFFSFLPESLHTFAFFYDDV 193          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA1_SOLLC (Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 2.630e-83
Identity = 147/193 (76.17%), Postives = 166/193 (86.01%), Query Frame = 2
Query:   89 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDV 667
            MDP K  PS+ ++ PF+TTNAG PV+N+  SLTVG RGPVLLEDY+L+EKLA F RE+IPERVVHARGASAKGFFE THDISHLTCAD  RAPG QTPVI RFSTV+HERGSPE++RD RGFAVKFYTREGN+DL+GN++PVFF RDA  FPD I A KPNPKSHIQE WRILDF S LPESL TF++F+DDV
Sbjct:    1 MDPSKYRPSSAYDTPFLTTNAGGPVYNNVSSLTVGPRGPVLLEDYYLIEKLATFDREKIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGAQTPVICRFSTVVHERGSPESIRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQENWRILDFFSFLPESLHTFAFFYDDV 193          
The following BLAST results are available for this feature:
BLAST of FC920418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA2_CUCPE1.592e-8875.90Catalase isozyme 2 OS=Cucurbita pepo GN=CAT2 PE=2 ... [more]
CATA2_NICPL2.079e-8880.31Catalase isozyme 2 OS=Nicotiana plumbaginifolia GN... [more]
CATA1_HORVU7.900e-8875.90Catalase isozyme 1 OS=Hordeum vulgare GN=CAT1 PE=2... [more]
CATA2_WHEAT6.688e-8775.38Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1[more]
CATA1_TOBAC2.541e-8678.76Catalase isozyme 1 OS=Nicotiana tabacum GN=CAT-1 P... [more]
CATA_SECCE4.793e-8575.38Catalase OS=Secale cereale PE=2 SV=1[more]
CATA_CAPAN5.299e-8477.20Catalase OS=Capsicum annuum GN=CAT PE=2 SV=1[more]
CATA_SOLME1.542e-8376.68Catalase OS=Solanum melongena PE=2 SV=1[more]
CATA2_SOLTU2.630e-8376.17Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE... [more]
CATA1_SOLLC2.630e-8376.17Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1... [more]

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Properties
Property NameValue
Genbank descriptionC32008B05EF RVDevelop1 Citrus clementina cDNA clone C32008B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920418 ID=FC920418; Name=FC920418; organism=Citrus clementina; type=EST; length=673bp
ACACTCTTCTTGAGTCTCGACTCAACTCCACTTCTCCTTTCTTACGATAA
TAATAACAGTAGCAAAATCTTCAGCAAGAAATATCGCCATGGATCCCTAC
AAATTGCTTCCGTCAACTACTCACAATGCCCCCTTTATGACTACAAATGC
CGGCGCTCCTGTCTGGAACGACAATCACTCCTTGACTGTTGGAAGTAGAG
GTCCTGTCCTTCTTGAGGATTATCATCTGGTGGAGAAACTAGCTCATTTT
GCCAGGGAGAGGATTCCAGAACGCGTCGTCCATGCTAGGGGAGCCAGTGC
TAAGGGTTTCTTTGAGTGCACCCATGATATTTCTCACCTTACTTGTGCTG
ATCTTTTTCGAGCTCCAGGGGTTCAGACACCTGTCATTGTTCGCTTCTCC
ACTGTTATCCATGAGCGGGGCAGCCCTGAGACACTCAGGGATCCTCGAGG
ATTTGCAGTCAAGTTTTACACCAGAGAGGGTAATTGGGATCTTCTGGGTA
ACAGTATCCCTGTTTTTTTCATCCGTGATGCAATCAAATTCCCAGATGTG
ATCCATGCTTTTAAACCTAATCCAAAGTCTCACATCCAAGAGTACTGGAG
GATCCTCGACTTCTGCTCCCACCTTCCTGAAAGCTTGTCCACATTTTCCT
GGTTCTTTGATGATGTGGGTATT
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